FC868714

Overview
NameFC868714
Unique NameFC868714
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11
Identity = 55/212 (25.94%), Postives = 91/212 (42.92%), Query Frame = 2
Query:  140 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSP----------------PVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            I+ +E+     ++V ++M A G+C SD H +        V   P++ GHE AG++E +G  V T+ PGD+V       C +C  CK    N C ++  L  P                P+H  L           + + D +S+ +     PL          S G   A + A +   +   + G G +GL  ++  +A GA RI+ VD++
Sbjct:   24 IEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKN-DLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDIN 226          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.330e-11
Identity = 59/212 (27.83%), Postives = 94/212 (44.34%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPE---SKGLGSPPVH----GCLANQVVH------------PADLCF-KLPDNVSLEEGAMCEPLSVGVH-----ACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            L I+ +E+     ++V +++ A GVC +D     TL  AD     P+V+GHE AG++E VG  V     GD V       C +C +CK G+ NLC +   ++G G  P       C   Q+ H             AD+   K+ +   LE+  +   L  G+      A   A +   +   + G G +GL   L  +  GA +I  +D++
Sbjct:   23 LVIEDIEVAPPKAHEVRIKITATGVCHTDAF---TLSGADPEGLFPVVLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVMPEGTSRLSCKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCL---LGCGISTGYGAALNTAKVEAGSTCAVWGLGAVGLAVGLGCKKAGAGKIYGIDIN 228          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH4_RAT (Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Adh4 PE=2 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.330e-11
Identity = 55/214 (25.70%), Postives = 92/214 (42.99%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQ-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            L I+ +E+     ++V +++ A  VC +D++     + A F    P+V+GHECAG++E VG  V    PGD+V       C +C  C     NLC + +    P +   L                            VV  A+L  ++ D  +LE   +  C   S    A   A + P +   + G G +GL  ++  +  GA RI+ +D++
Sbjct:   22 LCIEEIEVSPPKAHEVRIKVIATCVCPTDINATNPKKKALF----PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKKCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTSKERSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFTSGYGAAINTAKVTPGSACAVFGLGCVGLSAVIGCKIAGASRIIAIDIN 230          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL6 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6 GN=frmA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.737e-11
Identity = 59/195 (30.26%), Postives = 88/195 (45.13%), Query Frame = 2
Query:  176 DVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLC-----PESKGL-----------GSPPVH--GCLANQ---VVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR-ANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            +VL+++   GVC +D     TL   D     P+V+GHE AGV+ +VG  V ++ PGD V       C +C++C+ G+ NLC      + KGL           G P  H  GC       VV    L    P+        +   ++ G+ A    A + P  +V + G G IGL  +  AR   A RI+ +D +
Sbjct:   29 EVLIKVTHTGVCHTDAF---TLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTEXCGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTN 220          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH_MYCPN (Probable NADP-dependent alcohol dehydrogenase OS=Mycoplasma pneumoniae GN=adh PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.737e-11
Identity = 58/186 (31.18%), Postives = 85/186 (45.70%), Query Frame = 2
Query:  158 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKG--LGS---PPVHGCLANQVVHPADL---CFKLPDNVSLEEGAM-CEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVD 688
            P  GP D ++R  AV  C SDVH   T+       +  MV+GHE  GV+++VGSEVK+   GDRV +      W     + G     P   G  LG      V   +  +  H  D       +P+ + L +  M  + +  G HA   A+I     +    +GP+GL+ +  A   GA RI++VD
Sbjct:   20 PVCGPNDAIIRPLAVAPCTSDVH---TVWEGGIGERHNMVLGHEGCGVVDEVGSEVKSFKVGDRVLVAAITPEWNSVNAQAG----YPMHSGGMLGGWKFSNVKDGMFAEYFHVNDAEGNLALMPEGMDLADACMLSDMIPTGFHANELADIQYGVALSFFCAGPVGLMAIAGAALKGAGRIIVVD 198          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.269e-11
Identity = 61/211 (28.91%), Postives = 92/211 (43.60%), Query Frame = 2
Query:   83 EDGEEVNMAAWLMGVNTLKIQPLELP--SLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLC-PESKGLGSPPVHGCLA-----NQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVI 682
            E    V    W    N+    P      + G  DV  R+   GVC SD+H +K       V   P+V GHE  G++ +VGS+V+ +  GD+V +   + SC QCD C     N C  +    G+P + G +A     + +V       + P+N  L+ GA  +C  ++            P   V + G G +G V +  A+AFG    VI
Sbjct:    6 ETEHPVKALGWAATDNSGTFSPFNFSRRATGERDVQFRVLYCGVCHSDLHMVKN---EWGVTHYPIVPGHEIVGIVTEVGSKVEKVKIGDKVGVGVLVGSCRQCDQCSNDLENYCYKQILTYGAPYLDGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGLDKPGLRVGVNGLGGLGHVAVKFAKAFGTKVTVI 213          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.269e-11
Identity = 57/208 (27.40%), Postives = 92/208 (44.23%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPE---SKGLGSPPVHG----CLANQVVH--------------PADLCFKLPDNVSLEEGAMCEPLSVGVHA-CRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDV 691
            L I+ +++     ++V V++    VC +D +   TL   D     P+V+GHE +G++E VG  V    PGD V       C +C+YCK  + NLC +   S+G G  P       C   Q+ H                 LC   P+    +   +   +S G  A      +   + V + G G +GL  ++ A+A GA +IV +D+
Sbjct:   23 LSIETIQVAPPKAHEVRVKILYTAVCHTDAY---TLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDL 227          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.269e-11
Identity = 59/217 (27.19%), Postives = 97/217 (44.70%), Query Frame = 2
Query:  110 AWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPE---SKGLGSPPVHG----CLANQVVHPADLC----FKLPDNVSLEEGAMCEPL----------SVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            AW  G   L ++ +E+      +V +++ A GVC +D +   TL  +D     P+++GHE AG++E VG  V     GD V       C +C +CK  + NLC +   ++G G  P +     C   Q+ H         + +  ++SL       PL          S G  A    A + P +   + G G +GL  ++  +  GA RI+ VD++
Sbjct:   14 AWEAG-KPLSLEEVEVAPPRAGEVRIKVVATGVCHTDAY---TLSGSDPEGAFPVILGHEGAGLVESVGEGVTKFKAGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGRGLMPDNTSRFTCKGKQLFHFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAAIMGCKVAGATRIIGVDIN 226          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11
Identity = 54/178 (30.34%), Postives = 85/178 (47.75%), Query Frame = 2
Query:  176 DVLVRMKAVGVCGSDVHFLKTLRLADF-VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPESKGLGSPP-----VHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVI 682
            DV +++   GVC SD+H +K     D+     P+V GHE AG++ KVGS V     GDRV +   + SC +C+ C+    + CP+     + P       G  ++ VV       + PDN+ L+ GA  +C  ++V           P  ++ + G G +G V +   +AFG    VI
Sbjct:   32 DVTLKILYCGVCHSDLHTVKN----DWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTYNSPYKGTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVI 205          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: FADH_AMYME (NAD/mycothiol-dependent formaldehyde dehydrogenase OS=Amycolatopsis methanolica PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 57/213 (26.76%), Postives = 87/213 (40.85%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLC------------PESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACR-RANIGPETN---------VLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRL 706
            +++  + +P  GP +V   +    VC +D+    T R      + P ++GHE AG +E VG  V ++ PGD V L     C QC  CK GR   C             +   L      G  A++ +  A  C K+            +P   G+  C   A +G   N         V ++G G +G   +  AR  GA +I+ VD D  +L
Sbjct:   16 VELTDIVIPDPGPSEVTALIATCAVCHTDL----TYREGGINDEFPFLLGHEAAGTVESVGEGVDSVQPGDYVVLNWRAVCGQCRACKRGRPQYCFSTFNATQKMTLTDGTELTPALGIGAFADKTLVHAGQCTKV--------DPAADPAVAGLLGCGVMAGLGAAVNTGAVSRGDSVAVIGCGAVGDAVIAGARLAGANKIIAVDRDAKKL 216          
The following BLAST results are available for this feature:
BLAST of FC868714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
ADH1E_HORSE1.018e-1125.94Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]
ADHX_DROME1.330e-1127.83Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADH4_RAT1.330e-1125.70Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Ad... [more]
FRMA_ECOL61.737e-1130.26S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADH_MYCPN1.737e-1131.18Probable NADP-dependent alcohol dehydrogenase OS=M... [more]
GEDH1_OCIBA2.269e-1128.91Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
ADHX_CAEEL2.269e-1127.40Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADHH_GADMO2.269e-1127.19Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
MTDH1_STYHU2.963e-1130.34Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
FADH_AMYME3.870e-1126.76NAD/mycothiol-dependent formaldehyde dehydrogenase... [more]

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Properties
Property NameValue
Genbank descriptionC31003H04EF AbioticL1 Citrus clementina cDNA clone C31003H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868714 ID=FC868714; Name=FC868714; organism=Citrus clementina; type=EST; length=712bp
AGTGAAGTCTCTGCTGCGCACTTGTGTTTTTGAAGAGTGAAAAGCAAATA
TGGGCAAGGGAGGGATGTCACAAGGAGAAAAGGAAGATGGAGAAGAAGTT
AACATGGCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTCAGCCTTT
GGAGCTTCCTTCTCTGGGACCTTATGATGTTTTAGTCAGGATGAAAGCCG
TTGGTGTTTGTGGAAGTGATGTGCATTTTCTCAAGACCTTGAGGCTTGCC
GATTTTGTAGTGAAAGAGCCTATGGTGATTGGGCATGAGTGTGCTGGGGT
CATAGAGAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTG
TGGCCCTGGAACCAGGGATCAGCTGCTGGCAATGTGATTACTGCAAAGGA
GGTCGATACAACTTGTGTCCAGAGTCGAAAGGTCTTGGAAGTCCGCCAGT
TCATGGTTGTCTGGCTAATCAGGTGGTGCATCCTGCAGACCTATGTTTTA
AGCTGCCCGACAATGTGAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTG
AGTGTTGGTGTTCATGCCTGCCGCCGTGCCAATATCGGTCCTGAGACAAA
TGTGCTTATCATGGGATCAGGGCCCATAGGACTTGTCACAATGCTAGCAG
CTCGTGCTTTTGGAGCTCCTAGAATTGTCATTGTGGATGTGGATGACTAT
CGTTTATCTGTT
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