FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HSP82_TOBAC (Heat shock protein 82 (Fragment) OS=Nicotiana tabacum GN=HSP82 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.800e-52
Identity = 108/252 (42.86%), Postives = 156/252 (61.90%), Query Frame = 2
Query:    5 EFVSFPFYTWQEKSRTIEVXXXXXXXXXXXXXXXXXXXXXXXXXXX---------YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            EF+S+P Y W EK+   E+                                      +W+L N+ KPIW+R P+EI KDEY  FYK   N++ + LA  HF+ EG++EF+++L++P   P +  +    K  NI+LYV+RVFI D+ + EL P YL FVKGVVDSDDLPLN+SRE+LQ+++I++++RK LV+K  +M  +I  +ENKEDY KF+E F + LKLG  EDS    +LA LLR++++KS +E+ S
Sbjct:    1 EFISYPIYLWTEKTTEKEISDDEDDEPKKDEEGAVEEVDEDKEKEKGKKKKIKEVSHEWQLINKQKPIWLRKPEEITKDEYASFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFD-TRKKMNNIKLYVRRVFIMDNCE-ELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEI--AENKEDYNKFYEAFSKNLKLGIHEDSQNRAKLADLLRYHSTKSGDEMTS 248          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 204.912 bits (520), Expect = 3.657e-52
Identity = 109/253 (43.08%), Postives = 156/253 (61.66%), Query Frame = 2
Query:    5 EFVSFPFYTWQEKSRTIEVXXXXXXXXXXXXXXXXXXXXXXXXXXX----------YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            EF+S+P Y W EK+   E+                                       +WEL N+ KPIW+R P+EI K+EY  FYK   N++ D LA  HF+ EG++EF+++L++P   P +  +    K  NI+LYV+RVFI D+ + EL P YLSFVKGVVDSDDLPLN+SRE LQ+++I++++RK LV+K  +M  +I  +ENKEDY KF+E F + LKLG  EDS    ++A LLR++++KS +E+ S
Sbjct:  200 EFISYPIYLWTEKTTEKEISDDEDEDEPKKENEGEVEEVDEEKEKDGKKKKKIKEVSHEWELINKQKPIWLRKPEEITKEEYAAFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPKRAPFDLFD-TRKKLNNIKLYVRRVFIMDNCE-ELIPEYLSFVKGVVDSDDLPLNISRETLQQNKILKVIRKNLVKKCIEMFNEI--AENKEDYTKFYEAFSKNLKLGIHEDSQNRGKIADLLRYHSTKSGDEMTS 448          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.390e-51
Identity = 100/197 (50.76%), Postives = 146/197 (74.11%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I  +EY EFYK   N++ + LA  HF+ EG++EFR++L++P   P +  E    K  NI+LYV+RVFI D+ + ELFP YL+F++GVVDS+DLPLN+SREILQ+S+I++++RK LVRK  ++  ++  +E+KE+YKKF+E F + +KLG  EDS   ++L+ LLR+YTS S +E++S
Sbjct:  285 YIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEEHLAVKHFSVEGQLEFRALLFVPRRAPFDLFE-NRKKKNNIKLYVRRVFIMDNCE-ELFPEYLNFIRGVVDSEDLPLNISREILQQSKILKVIRKNLVRKCLELFHEL--AEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVS 477          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 3.096e-51
Identity = 94/195 (48.21%), Postives = 143/195 (73.33%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            +W++ N+TKP+W RNP ++ K+EY+ FYK   N++ +PLA  HF+ EG++EF+++L++P   P +  E    K  NI+LYVKRVFI D+   ++ P YL+FV+G+VDS+DLPLN+SRE LQ+++I+ ++RK LV+K  ++  +I  +EN EDYKKF+E F + LKLG  EDS   ++ A LLR+ TSKS +EL++
Sbjct:  254 EWDVLNKTKPLWTRNPSDVTKEEYNSFYKSISNDWEEPLAVKHFSVEGQLEFKAILFVPKKAPFDLFE-SKKKANNIKLYVKRVFIMDNC-ADIIPEYLNFVRGIVDSEDLPLNISRETLQQNKILTVIRKNLVKKCIELFNEI--AENSEDYKKFYEAFSKNLKLGVHEDSQNREKFADLLRYQTSKSGDELVT 444          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.176e-50
Identity = 101/198 (51.01%), Postives = 146/198 (73.74%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y + E  N+TKPIW RNP +I  +EY EFYK   N++ D LA  HF+ EG++EFR++L++P   P +  E  N KTKN I+LYV+RVFI ++ D EL P YL+F+KGVVDS+DLPLN+SRE+LQ+S+I++++RK LV+K  ++  +I  +E+K+++KKF+E F + +KLG  EDS   ++L+  LRFYTS S EE+ S
Sbjct:  266 YHEDEELNKTKPIWTRNPDDISNEEYAEFYKSLSNDWEDHLAVKHFSVEGQLEFRALLFVPQRAPFDLFE--NKKTKNAIKLYVRRVFIMENCD-ELMPEYLNFIKGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFDEI--AEDKDNFKKFYEQFSKNIKLGIHEDSTNRKKLSEFLRFYTSASSEEMTS 458          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 97/195 (49.74%), Postives = 141/195 (72.31%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            +WE+ N+ KPIWMR P E+  +EY  FYK   N++ D LA  HF+ EG++EF+++L++P   P +  E    K  NI+LYV+RVFI DD + EL P +LSFVKGVVDS+DLPLN+SRE LQ+++I++++RK LV+K  ++  ++  +E KED+KKF+E F + LKLG  ED+    ++A LLRF T+KS +EL+S
Sbjct:  281 EWEMLNKQKPIWMRLPSEVTNEEYAAFYKNLTNDWEDHLAVKHFSVEGQLEFKALLFVPRRAPFDMFE-SRKKKNNIKLYVRRVFIMDDCE-ELIPEWLSFVKGVVDSEDLPLNISRETLQQNKILKVIRKNLVKKCLELFNEL--TEKKEDFKKFYEQFSKNLKLGIHEDNANRSKIAELLRFETTKSGDELVS 471          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 97/195 (49.74%), Postives = 141/195 (72.31%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            +WE+ N+ KPIWMR P E+  +EY  FYK   N++ D LA  HF+ EG++EF+++L++P   P +  E    K  NI+LYV+RVFI DD + EL P +LSFVKGVVDS+DLPLN+SRE LQ+++I++++RK LV+K  ++  ++  +E KED+KKF+E F + LKLG  ED+    ++A LLRF T+KS +EL+S
Sbjct:  282 EWEMLNKQKPIWMRLPTEVTNEEYASFYKNLTNDWEDHLAVKHFSVEGQLEFKALLFVPRRAPFDMFE-SRKKKNNIKLYVRRVFIMDDCE-ELIPEWLSFVKGVVDSEDLPLNISRETLQQNKILKVIRKNLVKKCLELFNEL--TEKKEDFKKFYEQFSKNLKLGIHEDNANRSKIAELLRFETTKSGDELVS 472          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 100/197 (50.76%), Postives = 145/197 (73.60%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I ++EY EFYK   N++ D LA  HF+ EG++EFR++L+IP   P +  E    K  NI+LYV+RVFI D  D EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK +V+K  ++  ++  +E+KE+YKKF+E F + LKLG  EDS   +RL+ LLR++TS+S +E+ S
Sbjct:  276 YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFE-NKKKKNNIKLYVRRVFIMDSCD-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSEL--AEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTS 468          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 100/197 (50.76%), Postives = 145/197 (73.60%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I ++EY EFYK   N++ D LA  HF+ EG++EFR++L+IP   P +  E    K  NI+LYV+RVFI D  D EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK +V+K  ++  ++  +E+KE+YKKF+E F + LKLG  EDS   +RL+ LLR++TS+S +E+ S
Sbjct:  276 YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFE-NKKKKNNIKLYVRRVFIMDSCD-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSEL--AEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTS 468          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 100/197 (50.76%), Postives = 145/197 (73.60%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I ++EY EFYK   N++ D LA  HF+ EG++EFR++L+IP   P +  E    K  NI+LYV+RVFI D  D EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK +V+K  ++  ++  +E+KE+YKKF+E F + LKLG  EDS   +RL+ LLR++TS+S +E+ S
Sbjct:  276 YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFE-NKKKKNNIKLYVRRVFIMDSCD-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSEL--AEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTS 468          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HSP82_TOBAC2.800e-5242.86Heat shock protein 82 (Fragment) OS=Nicotiana taba... [more]
HSP81_ARATH3.657e-5243.08Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
HS90A_CRIGR1.390e-5150.76Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
HSC90_DICDI3.096e-5148.21Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSP90_BRUPA1.176e-5051.01Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HSP90_THEPA1.536e-5049.74Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
HSP90_THEAN1.536e-5049.74Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HS90B_RAT1.536e-5050.76Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]
HS90B_PONAB1.536e-5050.76Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]
HS90B_MACFA1.536e-5050.76Heat shock protein HSP 90-beta OS=Macaca fascicula... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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