FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 100/197 (50.76%), Postives = 145/197 (73.60%), Query Frame = 2 
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I ++EY EFYK   N++ D LA  HF+ EG++EFR++L+IP   P +  E    K  NI+LYV+RVFI D  D EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK +V+K  ++  ++  +E+KE+YKKF+E F + LKLG  EDS   +RL+ LLR++TS+S +E+ S
Sbjct:  276 YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFE-NKKKKNNIKLYVRRVFIMDSCD-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSEL--AEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTS 468
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 100/197 (50.76%), Postives = 145/197 (73.60%), Query Frame = 2 
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I ++EY EFYK   N++ D LA  HF+ EG++EFR++L+IP   P +  E    K  NI+LYV+RVFI D  D EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK +V+K  ++  ++  +E+KE+YKKF+E F + LKLG  EDS   +RL+ LLR++TS+S +E+ S
Sbjct:  276 YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFE-NKKKKNNIKLYVRRVFIMDSCD-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSEL--AEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTS 468
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 100/197 (50.76%), Postives = 145/197 (73.60%), Query Frame = 2 
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I ++EY EFYK   N++ D LA  HF+ EG++EFR++L+IP   P +  E    K  NI+LYV+RVFI D  D EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK +V+K  ++  ++  +E+KE+YKKF+E F + LKLG  EDS   +RL+ LLR++TS+S +E+ S
Sbjct:  276 YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFE-NKKKKNNIKLYVRRVFIMDSCD-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSEL--AEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTS 468
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 98/197 (49.75%), Postives = 145/197 (73.60%), Query Frame = 2 
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I  +EY EFYK   N++ D LA  HF+ EG++EFR++L++P   P +  E    K  NI+LYV+RVFI D+ + EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK LV+K  ++  ++  +E+KE+YKKF+E F + +KLG  EDS   ++L+ LLR+YTS S +E++S
Sbjct:  285 YIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFE-NRKKKNNIKLYVRRVFIMDNCE-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTEL--AEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVS 477
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 98/197 (49.75%), Postives = 145/197 (73.60%), Query Frame = 2 
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I  +EY EFYK   N++ D LA  HF+ EG++EFR++L++P   P +  E    K  NI+LYV+RVFI D+ + EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK LV+K  ++  ++  +E+KE+YKKF+E F + +KLG  EDS   ++L+ LLR+YTS S +E++S
Sbjct:  285 YIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFE-NRKKKNNIKLYVRRVFIMDNCE-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTEL--AEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVS 477
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 98/197 (49.75%), Postives = 145/197 (73.60%), Query Frame = 2 
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I  +EY EFYK   N++ D LA  HF+ EG++EFR++L++P   P +  E    K  NI+LYV+RVFI D+ + EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK LV+K  ++  ++  +E+KE+YKKF+E F + +KLG  EDS   ++L+ LLR+YTS S +E++S
Sbjct:  285 YIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFE-NRKKKNNIKLYVRRVFIMDNCE-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTEL--AEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVS 477
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 98/197 (49.75%), Postives = 145/197 (73.60%), Query Frame = 2 
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I  +EY EFYK   N++ D LA  HF+ EG++EFR++L++P   P +  E    K  NI+LYV+RVFI D+ + EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK LV+K  ++  ++  +E+KE+YKKF+E F + +KLG  EDS   ++L+ LLR+YTS S +E++S
Sbjct:  284 YIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFE-NRKKKNNIKLYVRRVFIMDNCE-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTEL--AEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVS 476
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 98/197 (49.75%), Postives = 145/197 (73.60%), Query Frame = 2 
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I  +EY EFYK   N++ D LA  HF+ EG++EFR++L++P   P +  E    K  NI+LYV+RVFI D+ + EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK LV+K  ++  ++  +E+KE+YKKF+E F + +KLG  EDS   ++L+ LLR+YTS S +E++S
Sbjct:  285 YIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFE-NRKKKNNIKLYVRRVFIMDNCE-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTEL--AEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVS 477
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.007e-50
Identity = 100/197 (50.76%), Postives = 145/197 (73.60%), Query Frame = 2 
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I ++EY EFYK   N++ D LA  HF+ EG++EFR++L+IP   P +  E    K  NI+LYV+RVFI D  D EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK +V+K  ++  ++  +E+KE+YKKF+E F + LKLG  EDS   +RL+ LLR++TS+S +E+ S
Sbjct:  277 YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFE-NKKKKNNIKLYVRRVFIMDSCD-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFTEL--AEDKENYKKFYEAFSKNLKLGIHEDSTNRKRLSELLRYHTSQSGDEMTS 469
[Close]
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.007e-50
Identity = 101/219 (46.12%), Postives = 144/219 (65.75%), Query Frame = 2 
Query:  146 WDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLD--PLAYSHFTTEGEVEFRSVLYIPGMGPLN-NEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQ--------------------SENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            ++WEL N+ K IW+R+PKE+ ++EY +FY     +F D  P+A+SHF  EG+VEF++VLY+P   P +  E   N    N++LYV+RVFISD+FD EL P+YLSF+KG+VDSD LPLNVSRE+LQ+   ++ ++K+L+RK  DMI+ +++                     E K  Y KFW  FG+ +KLG +ED+    RLA LLRF T+KS+ +L S
Sbjct:  336 YEWELLNDVKAIWLRSPKEVTEEEYTKFYHSLSKDFTDEKPMAWSHFNAEGDVEFKAVLYVPPKAPHDLYESYYNSNKANLKLYVRRVFISDEFD-ELLPKYLSFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEEDPDEIHDDEKKDVEKSGENDEKKGQYTKFWNEFGKSVKLGIIEDAANRNRLAKLLRFETTKSDGKLTS 553
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HS90B_HUMAN1.536e-5050.76Heat shock protein HSP 90-beta OS=Homo sapiens GN=... [more]
HS90B_HORSE1.536e-5050.76Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
HS90B_BOVIN1.536e-5050.76Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]
HS90A_PIG1.536e-5049.75Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_PANTR1.536e-5049.75Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HS90A_MACFA1.536e-5049.75Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN1.536e-5049.75Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_BOVIN1.536e-5049.75Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HS90B_CHICK2.007e-5050.76Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]
ENPL_ARATH2.007e-5046.12Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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