FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 2.621e-50
Identity = 100/197 (50.76%), Postives = 144/197 (73.10%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I ++EY EFYK   N++ D LA  HF+ EG++EFR+ L+IP   P +  E    K  NI+LYV+RVFI D  D EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK +V+K  ++  ++  +E+KE+YKKF+E F + LKLG  EDS   +RL+ LLR++TS+S +E+ S
Sbjct:  276 YIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRAFLFIPRRAPFDLFE-NKKKKNNIKLYVRRVFIMDSCD-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSEL--AEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTS 468          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90A_CHICK (Heat shock protein HSP 90-alpha OS=Gallus gallus GN=HSP90AA1 PE=3 SV=3)

HSP 1 Score: 198.364 bits (503), Expect = 3.423e-50
Identity = 98/197 (49.75%), Postives = 145/197 (73.60%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I  +EY EFYK   N++ D LA  HF+ EG++EFR++L++P   P +  E    K  NI+LYV+RVFI D+ + EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK LV+K  ++  ++  +E+KE+YKKF+E F + +KLG  EDS   ++L+ LLR+YTS S +E++S
Sbjct:  280 YIDEEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFE-NRKKKNNIKLYVRRVFIMDNCE-ELIPEYLNFMRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTEL--AEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVS 472          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.470e-50
Identity = 98/195 (50.26%), Postives = 141/195 (72.31%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            +W L N+ KPIWMR P+EI K+EY  FYK   N++ + LA  HF+ EG++EF++VL++P   P +  +    K  NI+LYV+RVFI D+ D EL P YLSFVKG+VDS+DLPLN+SRE LQ+++I++++RK LV+K  ++  +I  +ENKEDY KF+E F + LKLG  EDS    + A LLR++++KS +E+ S
Sbjct:  257 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFD-TKKKPNNIKLYVRRVFIMDNCD-ELIPEYLSFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCVELFFEI--AENKEDYNKFYEAFSKNLKLGIHEDSQNRAKFAELLRYHSTKSGDEMTS 447          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 4.470e-50
Identity = 97/197 (49.24%), Postives = 145/197 (73.60%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I  +EY EFYK   N++ + LA  HF+ EG++EFR++L++P   P +  E    K  NI+LYV+RVFI D+ + EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK LV+K  ++  ++  +E+KE+YKKF+E F + +KLG  EDS   ++L+ LLR+YTS S +E++S
Sbjct:  285 YIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEEHLAVKHFSVEGQLEFRALLFVPRRAPFDLFE-NRKKKNNIKLYVRRVFIMDNCE-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTEL--AEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVS 477          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 197.978 bits (502), Expect = 4.470e-50
Identity = 97/197 (49.24%), Postives = 145/197 (73.60%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I  +EY EFYK   N++ + LA  HF+ EG++EFR++L++P   P +  E    K  NI+LYV+RVFI D+ + EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK LV+K  ++  ++  +E+KE+YKKF+E F + +KLG  EDS   ++L+ LLR+YTS S +E++S
Sbjct:  285 YIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEEHLAVKHFSVEGQLEFRALLFVPRRAPFDLFE-NRKKKNNIKLYVRRVFIMDNCE-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTEL--AEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVS 477          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 7.625e-50
Identity = 97/195 (49.74%), Postives = 143/195 (73.33%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            +W L N+ KPIWMR P+EI K+EY  FYK   N++ + LA  HF+ EG++EF++VL++P   P +  +    K  NI+LYV+RVFI D+ + EL P +LSFVKG+VDS+DLPLN+SRE+LQ+++I++++RK LV+K  ++  +I  +ENKEDY KF+E F + LKLG  EDS    ++A LLR++++KS +EL S
Sbjct:  259 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFD-TRKKLNNIKLYVRRVFIMDNCE-ELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEI--AENKEDYNKFYEAFSKNLKLGIHEDSTNRNKIAELLRYHSTKSGDELTS 449          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.625e-50
Identity = 97/195 (49.74%), Postives = 143/195 (73.33%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            +W L N+ KPIWMR P+EI K+EY  FYK   N++ + LA  HF+ EG++EF++VL++P   P +  +    K  NI+LYV+RVFI D+ + EL P +LSFVKG+VDS+DLPLN+SRE+LQ+++I++++RK LV+K  ++  +I  +ENKEDY KF+E F + LKLG  EDS    ++A LLR++++KS +EL S
Sbjct:  259 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFD-TRKKLNNIKLYVRRVFIMDNCE-ELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEI--AENKEDYNKFYEAFSKNLKLGIHEDSTNRNKIAELLRYHSTKSGDELTS 449          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.625e-50
Identity = 97/197 (49.24%), Postives = 144/197 (73.10%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y D E  N+TKPIW RNP +I  +EY EFYK   N++ D LA  HF+ EG++EFR++L++P   P +  E    K  NI+LYV+RVFI D+ + EL P YL+F++GVVDS+DLPLN+SRE+LQ+S+I++++RK LV+K  ++  ++  +E+KE+YKKF+E   + +KLG  EDS   ++L+ LLR+YTS S +E++S
Sbjct:  274 YIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFE-NRKKKNNIKLYVRRVFIMDNCE-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTEL--AEDKENYKKFYEQLSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVS 466          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HSP83_LEIDO (Heat shock protein 83 (Fragment) OS=Leishmania donovani GN=HSP83 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.301e-49
Identity = 92/193 (47.67%), Postives = 144/193 (74.61%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEEL 727
            ++E+ N+ KP+W R+PK++ K+EY  FYK   N++ DP+A  HF+ EG++EFRS++++P   P +  E  N K  NI+LYV+RVFI D+ + +L P +L FVKGVVDS+DLPLN+SRE LQ+++I++++RK +V+K  +M  ++  +ENKEDYK+F+E FG+ +KLG  ED+  P++L   LRFY+++S  E+
Sbjct:   10 EYEVQNKHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPMATKHFSVEGQLEFRSIMFVPKRAPFDMFE-PNKKRNNIKLYVRRVFIMDNCE-DLCPDWLGFVKGVVDSEDLPLNISRENLQQNKILKVIRKNIVKKCLEMFDEV--AENKEDYKQFYEQFGKNIKLGIHEDTANPKKLMEFLRFYSTESGLEM 198          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.301e-49
Identity = 97/197 (49.24%), Postives = 145/197 (73.60%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            Y + E  N+TKPIW RNP +I ++EY EFYK   N++ D LA  HF+ EG++EFR++L+IP   P +  E    K  NI+LYV+RVFI D+ + +L P YL+F+KGVVDS+DLPLN+SRE+LQ++++++++RK LV+KT ++I+++  +E+KE+YKKF++ F + LKLG  EDS    +LA  LRF+TS S ++  S
Sbjct:  268 YTEDEELNKTKPIWTRNPDDISQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRTPFDLFE-NQKKRNNIKLYVRRVFIMDNCE-DLIPEYLNFIKGVVDSEDLPLNISREMLQQNKVLKVIRKNLVKKTMELIEEL--TEDKENYKKFYDQFSKNLKLGVHEDSNNRAKLADFLRFHTSASGDDFCS 460          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HS90B_MOUSE2.621e-5050.76Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]
HS90A_CHICK3.423e-5049.75Heat shock protein HSP 90-alpha OS=Gallus gallus G... [more]
HSP80_SOLLC4.470e-5050.26Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HS90A_RAT4.470e-5049.24Heat shock protein HSP 90-alpha OS=Rattus norvegic... [more]
HS90A_MOUSE4.470e-5049.24Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HSP81_ORYSJ7.625e-5049.74Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI7.625e-5049.74Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HS90A_HORSE7.625e-5049.24Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]
HSP83_LEIDO1.301e-4947.67Heat shock protein 83 (Fragment) OS=Leishmania don... [more]
HSP83_DROAV1.301e-4949.24Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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