FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_RICTY (Chaperone protein htpG OS=Rickettsia typhi GN=htpG PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.071e-27
Identity = 66/180 (36.67%), Postives = 103/180 (57.22%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            N    +W R   EI +++Y EFYK       DP    H   EG +EF ++L+IP        ++ +P  K  ++LY+KRVFISD+ + +L P YL F++GVVDS+DLPLN+SRE LQ + ++  ++  + ++    ++   + E  E+Y KFW NFG  LK G  E +   ++L  +  F
Sbjct:  220 NSASALWTRPKSEITEEQYKEFYKSLSYSVDDPWVTLHNKNEGAIEFTNLLFIPSSKTF---DLFHPDRKRRVKLYIKRVFISDE-NIDLIPSYLRFLRGVVDSEDLPLNISRESLQHNNVLEKIKNAITKRVLGELRK-KKEELPEEYNKFWTNFGGALKEGLCEATTDHEKLLEVCIF 394          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_METNO (Chaperone protein htpG OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=htpG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.317e-27
Identity = 67/185 (36.22%), Postives = 110/185 (59.46%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            NE   +W +   EI ++ Y  FY+   + F  P A  H+  EG ++F ++L+IP M P    E    +   +RL+V+R+FI+D+    L P +L FV+GVVD++DLPLNVSRE+LQ + ++  +R+ +  K    ++  S++++ + Y  FW+ FG  LK G  ED+ +   +A L+RF +S  E
Sbjct:  219 NEGTALWRKPKAEITEETYTAFYRHLTHNFDTPWATLHWRAEGALDFSALLFIPSMKPFLAVE--EERESKVRLHVRRMFITDE--AGLLPSWLRFVQGVVDTEDLPLNVSREMLQATPVLARIRRAVTAKVLSELK--SRAKDADGYASFWQAFGPVLKEGIWEDAEQRDDIAGLIRFRSSAVE 397          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_NITHX (Chaperone protein htpG OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=htpG PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.944e-27
Identity = 67/177 (37.85%), Postives = 102/177 (57.63%), Query Frame = 2
Query:  179 IWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTS 709
            +W +   EI   EY +FY+     F +P    HF  EG  EF ++L++P     +  E    +   I+LYVKRVFI+DD D  L PRYL FV+GVVDS DLPLN+SRE++QES I+  ++K +  +    ++ +++ ++ + Y K WE FG   K G  + + +   +  L RF T+
Sbjct:  241 LWTKPRGEIGTSEYVDFYRSVAGHFDEPALTVHFRAEGRQEFTALLFVPQTRSFDLFE--TDRKGPIKLYVKRVFITDDAD--LLPRYLRFVRGVVDSADLPLNISREMIQESPILAAIKKSITGRVLSELEKLAE-KDAQAYGKVWEAFGPMFKEGIYDAADRRDAILSLCRFRTT 412          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_DESPS (Chaperone protein htpG OS=Desulfotalea psychrophila GN=htpG PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.944e-27
Identity = 71/190 (37.37%), Postives = 105/190 (55.26%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMN--PKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            E+ N  + +W R+  EI  +EY+EFYK   N   DP    HF+ +  +  +S+L++P      N E+M        + LY +R+ I D     + P +L F+KGVVDS+DLPLN+SR+ LQ++ +V  +R R+V K F        + ++  Y +FW  FG +LK G   D    + L  LLRF TSKSE
Sbjct:  211 EVVNTVQALWSRSKSEISDEEYNEFYKFIGNATEDPSYRLHFSADAPLSIKSLLFVPK----ENFEVMGFGRVEPGVNLYCQRILI-DQHSENILPGWLRFLKGVVDSEDLPLNISRQSLQDNALVSKIR-RVVTKRFLKYLAEEATRDESQYLQFWSTFGIYLKEGVTTDYEYQKELGKLLRFETSKSE 394          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_DESHY (Chaperone protein htpG OS=Desulfitobacterium hafniense (strain Y51) GN=htpG PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.944e-27
Identity = 68/195 (34.87%), Postives = 110/195 (56.41%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEI-MNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKS-EEELIS 733
            E  N  + +W +N  EI ++EY EFYK   N + +PL   HF+++  +   ++L++P     N E+         + LY K+V I +    ++ P +L F +GVVDS++LPLN+SRE +Q+S ++  + K +  +    + D +++E  E +K+FW  F  FLK G   D    Q +  LLRF +SK+ E ELIS
Sbjct:  213 EKINTVQALWTKNKNEISEEEYKEFYKYIANAYDEPLMRMHFSSDAPINLNALLFVP---KSNMEKFGFGRMEAGVNLYCKKVLIQEKAK-DIVPEWLRFARGVVDSEELPLNISRETMQDSALIAKLNKVVTSRFLKFLDDQAKNE-PEIFKEFWNEFSIFLKEGAANDFTHRQEILKLLRFESSKTGEGELIS 402          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_RICBR (Chaperone protein htpG OS=Rickettsia bellii (strain RML369-C) GN=htpG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.070e-27
Identity = 63/180 (35.00%), Postives = 104/180 (57.78%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            N    +W R+  EI +++Y EFYK       DP    H   EG +EF ++L+IP        ++ +P  K  ++LY+KRVFISD+ + +L P YL F++GVVDS+DLPLN+SRE LQ + ++  ++  + ++    ++   + ++ ++Y  FW NFG  LK G  E +   ++L  +  F
Sbjct:  220 NSASALWTRSKSEITEEQYKEFYKSLSYAVDDPWVTMHNKNEGAIEFTNLLFIPSS---KTYDLFHPDRKRRVKLYIKRVFISDE-NIDLIPSYLRFLRGVVDSEDLPLNISRESLQHNNVLEKIKNAITKRVLGELKK-KKEDSPDEYNNFWANFGGALKEGLCEATTDHEKLLEVCIF 394          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_RICB8 (Chaperone protein htpG OS=Rickettsia bellii (strain OSU 85-389) GN=htpG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.070e-27
Identity = 63/180 (35.00%), Postives = 104/180 (57.78%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            N    +W R+  EI +++Y EFYK       DP    H   EG +EF ++L+IP        ++ +P  K  ++LY+KRVFISD+ + +L P YL F++GVVDS+DLPLN+SRE LQ + ++  ++  + ++    ++   + ++ ++Y  FW NFG  LK G  E +   ++L  +  F
Sbjct:  220 NSASALWTRSKSEITEEQYKEFYKSLSYAVDDPWVTMHNKNEGAIEFTNLLFIPSS---KTYDLFHPDRKRRVKLYIKRVFISDE-NIDLIPSYLRFLRGVVDSEDLPLNISRESLQHNNVLEKIKNAITKRVLGELKK-KKEDSPDEYNNFWANFGGALKEGLCEATTDHEKLLEVCIF 394          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BACLD (Chaperone protein htpG OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=htpG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.070e-27
Identity = 69/194 (35.57%), Postives = 114/194 (58.76%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSG-KPQRLAPLLRFYTSKSEEELIS 733
            +  N   PIW +N  E++ ++Y  FYK+    F  PLA+ H + +G V + ++L+IP   P N         K + LY   V I +    +L P + SFVKG+VDS+DL LN+SRE+LQ  R ++++ K + +K  + ++ + +++ +E Y+ F+++FGR LK G   D G     L  LL FY+SK E++L++
Sbjct:  230 QTVNSMVPIWRKNKSELKDEDYEAFYKEKHYGFDKPLAHIHTSVDGAVRYHAILFIPENIPFN--YYTKEFEKGLELYSNGVLIMEKCP-DLLPDHFSFVKGMVDSEDLSLNISREMLQHDRQLKLIAKNISKKIKNELKSLLKND-REKYESFYQSFGRQLKFGVYNDFGAHKDLLKDLLLFYSSK-EKKLVT 418          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPB (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisB18) GN=htpG PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.185e-26
Identity = 64/190 (33.68%), Postives = 105/190 (55.26%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELI 730
            N    +W R+  E+  ++Y + YK+    F +P    H+  EG   +  +L+ P   P    ++  P  K  ++LYV+RVFI+D+ D  L P YL F++GV+DS+DLPLN+SRE+LQ +  +  +RK +  K    ++ +   ++ E + K W+ FG  +K G  ED  +  +L  L RF T+K E   +
Sbjct:  227 NSASALWQRSKSELTAEDYSQAYKQIAGAFDEPAMTLHYRAEGRYSYAVLLFAPSTKPF---DLFEPARKGRVKLYVRRVFITDEAD--LLPSYLRFIRGVIDSEDLPLNLSREMLQNNPQLAQIRKAVTGKVIGELESLG-DKDPEAFGKIWDAFGLVIKEGIWEDYERRDKLLALSRFTTTKGENRTL 410          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_RHOP2 (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain HaA2) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.547e-26
Identity = 63/191 (32.98%), Postives = 107/191 (56.02%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEELIS 733
            N    +W R+  E+ +++Y + YK+    F +P    H+  EG   +  +L+ P   P    ++  P+ K  ++LYV+RVFI+ D D  L P YL F++GV+DS+DLPLN+SRE+LQ +  +  +RK +  K    +  ++  +  E + K W+ FG  +K G  ED  + ++L  L RF T+  E+  ++
Sbjct:  227 NSASALWQRSKSELTEEDYKQAYKQVAGAFDEPAMTLHYRAEGRQSYAVLLFAPSTKPF---DLFEPERKGRVKLYVRRVFITADAD--LLPPYLRFLRGVIDSEDLPLNLSREMLQNNPQLAQIRKAVTGKVIGELDSLADKQ-PEQFAKIWDAFGPVIKEGLYEDYERREKLLSLARFTTTAGEKRSLA 411          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_RICTY4.071e-2736.67Chaperone protein htpG OS=Rickettsia typhi GN=htpG... [more]
HTPG_METNO5.317e-2736.22Chaperone protein htpG OS=Methylobacterium nodulan... [more]
HTPG_NITHX6.944e-2737.85Chaperone protein htpG OS=Nitrobacter hamburgensis... [more]
HTPG_DESPS6.944e-2737.37Chaperone protein htpG OS=Desulfotalea psychrophil... [more]
HTPG_DESHY6.944e-2734.87Chaperone protein htpG OS=Desulfitobacterium hafni... [more]
HTPG_RICBR9.070e-2735.00Chaperone protein htpG OS=Rickettsia bellii (strai... [more]
HTPG_RICB89.070e-2735.00Chaperone protein htpG OS=Rickettsia bellii (strai... [more]
HTPG_BACLD9.070e-2735.57Chaperone protein htpG OS=Bacillus licheniformis (... [more]
HTPG_RHOPB1.185e-2633.68Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_RHOP21.547e-2632.98Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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