FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ALKMQ (Chaperone protein htpG OS=Alkaliphilus metalliredigens (strain QYMF) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.547e-26
Identity = 67/190 (35.26%), Postives = 111/190 (58.42%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGK-PQRLAPLLRFYTSKSEE 721
            ++ N   P+W RN  E+ K++Y  FY +    F  PL + H + +G V + ++L+IP   P   +       K + LY   V I +    +L P Y SFVKG+VDS+DL LN+SRE+LQ  R ++I+ K++  K    ++ + ++E +E Y++F+++FGR +K G   D G+  + L  LL FY+SK ++
Sbjct:  230 QVVNSMVPMWRRNKNELTKEDYDLFYSEKHYGFDKPLKHIHISADGAVRYNAILFIPEKIPY--DFYTKEYEKGLELYSSGVLIMNKCS-DLLPDYFSFVKGMVDSEDLSLNISREMLQHDRQLKIIAKKIKEKIKSELELLLKNE-RERYEEFYDSFGRQIKYGVYSDFGQNKETLKDLLLFYSSKEKK 415          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_CHLCH (Chaperone protein htpG OS=Chlorobium chlorochromatii (strain CaD3) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.021e-26
Identity = 68/190 (35.79%), Postives = 111/190 (58.42%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGP----LNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEE 721
            N    +W R   E++ +E +EFYK   ++F DPL Y   + EG V F+++L++P   P        E+ N   +  +LYVK+V I ++   +L P YL F+ GVVD++DL LNVSRE++Q S ++  +R+ L  K     + +++ E  E +K F++ FG  +K+G   D    ++L  LLRF ++K+EE
Sbjct:  225 NSMTALWQRPKSELKDEEVNEFYKFVASDFNDPLDYLSISVEGMVSFKALLFLPKEAPPELMYRQSELEN---RGPQLYVKKVLIQNEC-RDLLPEYLRFIAGVVDTEDLSLNVSREMVQSSPVMAKIRQILTGKILGWFEMLAK-EQPEKFKTFYKAFGPIIKIGLNTDFTNREKLIELLRFESTKTEE 409          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_NEOSM (Chaperone protein htpG OS=Neorickettsia sennetsu (strain Miyayama) GN=htpG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.639e-26
Identity = 69/193 (35.75%), Postives = 112/193 (58.03%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTK-NIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVE--DSGKPQRLAPLLRFYTSKSEEELIS 733
            N    IW +N  EI  +E+  F++   +    P    H   EG  E+ ++LY+P + P    ++ NP  + +++LY+K+VFI+++ + +L P+YL F+KGVVD  DLPLN+SRE LQ +  +  ++K L  +  + ++  + S  +E    FW NFG  LK G  E   + + +RL  L RFY+ K +E+LIS
Sbjct:  220 NSASAIWTKNKTEITDEEHQNFFRDVAHVGGKPWMIIHNKNEGSTEYINLLYVPSIKPF---DLYNPDRRASVKLYIKKVFITEE-NVQLIPQYLRFLKGVVDCADLPLNISRETLQYNNALVKIKKSLTNRVLNELKKRADSNPEEYISGFWNNFGAVLKEGLCEAMPTDERERLFALCRFYSLK-KEKLIS 407          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BACSU (Chaperone protein htpG OS=Bacillus subtilis GN=htpG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.639e-26
Identity = 67/194 (34.54%), Postives = 112/194 (57.73%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSG-KPQRLAPLLRFYTSKSEEELIS 733
            +  N   PIW +N  E+  ++Y +FY +    F  PL + H + +G V + ++L++P   P   +       K + LY   V I +    +L P + SFVKG+VDS+DL LN+SRE+LQ  R ++++ K + +K    +Q + + +++E Y+ F+++FGR LK G   D G    +L  LL FY+SK E++L+S
Sbjct:  230 QTVNSMVPIWRKNKSELTDEDYEKFYAEKHYGFDKPLTHVHISVDGAVRYNAILFVPENMPF--DYYSKEYEKGLELYSNGVLIMNKC-ADLLPDHFSFVKGMVDSEDLSLNISREMLQHDRQLKLIAKNISKKIKSELQSLLK-KDREKYETFYKSFGRQLKFGVYNDFGANKDQLKDLLLFYSSK-EKKLVS 418          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BACSK (Chaperone protein htpG OS=Bacillus clausii (strain KSM-K16) GN=htpG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.501e-26
Identity = 69/198 (34.85%), Postives = 110/198 (55.56%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSG-KPQRLAPLLRFYTSKSEEELIS 733
            Y + +  N   PIW +N  E++  +Y +FY+     F  PL + H + +G + + ++L+IP   P   +       K + LY   V I +    EL P Y SFVKG+VDS+DL LN+SRE+LQ  R ++++ K +  K    ++ + + E  + Y+KF++ FGR LK G   D G     L  LL FY+S +E++L+S
Sbjct:  226 YQEEQTINSMVPIWRKNKSELKDSDYEQFYQDKRYGFDKPLEHIHVSVDGAIRYNAILFIPEHTPF--DYYSKEYEKGLELYANGVLIMEKC-AELLPDYFSFVKGMVDSEDLSLNISREMLQHDRQLKLIAKNIKSKIKSQLKTMLKKE-PDKYEKFYKAFGRQLKFGVYNDFGANKDDLQDLLLFYSS-TEKKLVS 418          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_CLOAB (Chaperone protein htpG OS=Clostridium acetobutylicum GN=htpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.310e-25
Identity = 70/198 (35.35%), Postives = 110/198 (55.56%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQR-LAPLLRFYTSKSEEELIS 733
            Y + E  N   PIW +N  E+++++Y  FY      F  PL   H   EG V + ++L+IP   P   +       K + LY   V I     G+L P Y SFV+G+VDS DL LN+SRE+LQ  R ++ + K++  K    +  +++++ +E+Y KF+ +FGR LK G   D G  +  L  LL FY+S +E++L++
Sbjct:  226 YLEDETLNSMVPIWRKNKNELKQEDYDNFYMDKHFGFEKPLKTIHSNVEGVVSYNTLLFIPASAPY--DFYTKEFEKGLELYSNGVMIMQKC-GDLLPDYFSFVQGLVDSPDLSLNISRELLQHDRQLKFIAKKIKEKIKSELLSMAKND-RENYVKFFNSFGRQLKYGVYSDFGSNKEVLQDLLMFYSS-TEKKLVT 418          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BACA2 (Chaperone protein htpG OS=Bacillus amyloliquefaciens (strain FZB42) GN=htpG PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.234e-25
Identity = 68/194 (35.05%), Postives = 110/194 (56.70%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSG-KPQRLAPLLRFYTSKSEEELIS 733
            +  N   PIW +N  E+  ++Y  FY +    F  PL + H + +G V + S+L+IP   P   +       K + LY   V I +    +L P + SFVKG+VDS+DL LN+SRE+LQ  R ++++ K + +K    ++ + +++ +E Y+ F+E+FGR LK G   D G     L  LL FY+SK E++L++
Sbjct:  230 QTVNSMVPIWRKNKSELTDEDYEAFYAEKHYGFDKPLTHVHISVDGAVRYNSILFIPENMPF--DYYTKEFEKGLELYSNGVLIMNKC-ADLLPDHFSFVKGMVDSEDLSLNISREMLQHDRQLKLIAKNINKKIKAELKSLLKNK-REKYESFYESFGRQLKFGVYNDFGANKDVLKDLLLFYSSK-EKKLVT 418          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ALKOO (Chaperone protein htpG OS=Alkaliphilus oremlandii (strain OhILAs) GN=htpG PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.977e-25
Identity = 68/198 (34.34%), Postives = 111/198 (56.06%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQR-LAPLLRFYTSKSEEELIS 733
            Y + +  N   PIW +N  E+ K++Y  FY +    F  P+ + H + +G V + ++L+IP   P   +       K + LY   V I +    +L P Y SFVKG+VDS+DL LN+SRE+LQ  R ++++ K +  K  + +  + + E++  Y+ F+E FGR LK G   + G  +  L  LL FY+SK E++L++
Sbjct:  226 YVEEQTINSMVPIWRKNKNELTKEDYDNFYMEKRYGFDKPVKHIHISADGAVRYNAILFIPERTPF--DYYTKEYEKGLELYSNGVLIMNKCS-DLLPDYFSFVKGMVDSEDLSLNISREMLQHDRQLKLIGKNIKNKIKNELMSLLK-EDRTQYEAFFEAFGRQLKYGIYSEFGSNKDVLQDLLLFYSSK-EKKLVT 418          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: TRAP1_RAT (Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus GN=Trap1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.448e-24
Identity = 63/191 (32.98%), Postives = 112/191 (58.64%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGK--PQRLAPLLRFYTS 709
            Y +    N  + IWM +PK+I + ++ EFY+     +  P    H+ T+  +  RS+ Y+P M P +  ++      ++ LY ++V I      ++ P++L FV+GVVDS+D+PLN+SRE+LQES ++R +R  L ++      D S+ ++ E Y KF+E++G F++ G V  + +   + +A LLR+ +S
Sbjct:  288 YLNGRRINTLQAIWMMDPKDISEFQHEEFYRYIAQAYDKPRFILHYKTDAPLNIRSIFYVPEMKP-SMFDVSRELGSSVALYSRKVLIQTKAT-DILPKWLRFVRGVVDSEDIPLNLSRELLQESALIRKLRDVLQQRLIKFFIDQSK-KDAEKYAKFFEDYGLFMREGIVTTAEQDIKEDIAKLLRYESS 475          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: TRAP1_MOUSE (Heat shock protein 75 kDa, mitochondrial OS=Mus musculus GN=Trap1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.448e-24
Identity = 62/191 (32.46%), Postives = 113/191 (59.16%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGK--PQRLAPLLRFYTS 709
            Y + +  N  + IWM +PK+I + ++ EFY+     +  P    H+ T+  +  RS+ Y+P M P +  ++      ++ LY ++V I      ++ P++L F++GVVDS+D+PLN+SRE+LQES ++R +R  L ++      D S+ ++ E Y KF+E++G F++ G V  + +   + +A LLR+ +S
Sbjct:  288 YLNGKRINTLQAIWMMDPKDISEFQHEEFYRYIAQAYDKPRFTLHYKTDAPLNIRSIFYVPEMKP-SMFDVSRELGSSVALYSRKVLIQTKA-ADILPKWLRFIRGVVDSEDIPLNLSRELLQESALIRKLRDVLQQRLIKFFIDQSK-KDAEKYAKFFEDYGLFMREGIVTTAEQDIKEDIAKLLRYESS 475          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_ALKMQ1.547e-2635.26Chaperone protein htpG OS=Alkaliphilus metalliredi... [more]
HTPG_CHLCH2.021e-2635.79Chaperone protein htpG OS=Chlorobium chlorochromat... [more]
HTPG_NEOSM2.639e-2635.75Chaperone protein htpG OS=Neorickettsia sennetsu (... [more]
HTPG_BACSU2.639e-2634.54Chaperone protein htpG OS=Bacillus subtilis GN=htp... [more]
HTPG_BACSK4.501e-2634.85Chaperone protein htpG OS=Bacillus clausii (strain... [more]
HTPG_CLOAB1.310e-2535.35Chaperone protein htpG OS=Clostridium acetobutylic... [more]
HTPG_BACA22.234e-2535.05Chaperone protein htpG OS=Bacillus amyloliquefacie... [more]
HTPG_ALKOO4.977e-2534.34Chaperone protein htpG OS=Alkaliphilus oremlandii ... [more]
TRAP1_RAT1.448e-2432.98Heat shock protein 75 kDa, mitochondrial OS=Rattus... [more]
TRAP1_MOUSE1.448e-2432.46Heat shock protein 75 kDa, mitochondrial OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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