FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: TRAP1_BOVIN (Heat shock protein 75 kDa, mitochondrial OS=Bos taurus GN=TRAP1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.726e-22
Identity = 59/191 (30.89%), Postives = 108/191 (56.54%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGK--PQRLAPLLRFYTS 709
            Y +    N  + IWM +PK++ + ++ EFY+        P    H+ T+  +  RS+ Y+P   P +  ++      ++ LY ++V I       + P +L FV+GVVDS+D+PLN+SRE+LQES ++R ++  L ++      D S+ ++ E Y +F+E++G F++ G V  + +   + +A LLR+ +S
Sbjct:  285 YLNGRRMNTLQAIWMMDPKDVGEGQHEEFYRYVAQAHDRPRYTLHYRTDAPLSIRSIFYVPDAKP-SMFDVSRELGSSVSLYSRKVLIQTKATN-ILPTWLRFVRGVVDSEDIPLNLSRELLQESALIRKLQGVLQQRLIKFFTDQSK-KDAEKYARFFEDYGLFVREGIVTTAEQEVKEDIAKLLRYESS 472          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: TRAP1_DICDI (TNF receptor-associated protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=trap1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.147e-21
Identity = 59/182 (32.42%), Postives = 98/182 (53.85%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTS 709
            N  KP+W  N   I ++E+ EFY+     +  P    HF+T+  +  RS+ YIP       +  M      + L+ ++V I    +G + P ++ FV+GVVDS+D+PLNVSRE LQ++ +++ +   LV++    + D ++S+  E +  F   FG F K G + D      ++ LLRF +S
Sbjct:  309 NTIKPLWTLNKNAISEEEHKEFYQFLSKSYDTPSYRVHFSTDTPLSIRSIFYIPSQHM--EKYGMGKMEPGVSLFSRKVLIQQKANG-ILPEWMRFVRGVVDSEDIPLNVSREHLQDNGLIQRISSVLVKRILKHLNDEAKSD-PEKFNVFMTEFGGFFKEGIITDFKWKDEISKLLRFESS 486          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PORGI (Chaperone protein htpG OS=Porphyromonas gingivalis GN=htpG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.222e-20
Identity = 50/179 (27.93%), Postives = 98/179 (54.75%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            N+T P W + P +++ ++Y EFY+  +    +PL + H   +       +LY P +   NN ++   K   I+LY  +V+++D+  G + P +L+ + GV+DS D+PLNVSR  LQ    V+ +   + +K  D +++I +++ +  +++ W++   F++ G + D    +R A    F
Sbjct:  224 NDTHPAWTKKPADLKDEDYKEFYRSLYPMSEEPLFWIHLNVDYPFNLTGILYFPKIK--NNLDLQRNK---IQLYCNQVYVTDEVQG-IVPDFLTLLHGVIDSPDIPLNVSRSYLQSDANVKKISSHITKKVADRLEEIFKND-RPTFEEKWDSLKLFVEYGMLTDEKFYERAAKFFLF 395          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PORG3 (Chaperone protein htpG OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.222e-20
Identity = 50/179 (27.93%), Postives = 98/179 (54.75%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            N+T P W + P +++ ++Y EFY+  +    +PL + H   +       +LY P +   NN ++   K   I+LY  +V+++D+  G + P +L+ + GV+DS D+PLNVSR  LQ    V+ +   + +K  D +++I +++ +  +++ W++   F++ G + D    +R A    F
Sbjct:  224 NDTHPAWTKKPADLKDEDYKEFYRSLYPMSEEPLFWIHLNVDYPFNLTGILYFPKIK--NNLDLQRNK---IQLYCNQVYVTDEVQG-IVPDFLTLLHGVIDSPDIPLNVSRSYLQSDANVKKISSHITKKVADRLEEIFKND-RPTFEEKWDSLKLFVEYGMLTDEKFYERAAKFFLF 395          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BACTN (Chaperone protein htpG OS=Bacteroides thetaiotaomicron GN=htpG PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.081e-19
Identity = 50/164 (30.49%), Postives = 90/164 (54.88%), Query Frame = 2
Query:  158 LANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLG 649
            + N+T P+W R P E+  ++Y  FY K +    +PL + H   +       +LY P +   +N E+   K   I+LY  +V+++D  +G + P +L+ + GV+DS D+PLNVSR  LQ    V+ +   + +K  D +Q I +++ K+ +++ W +   F+  G
Sbjct:  219 IINDTTPLWTRKPSELSDEDYKSFYTKLYPMSDEPLFWIHLNVDYPFHLTGILYFPKVK--SNIELNKNK---IQLYCNQVYVTDSVEG-IVPDFLTLLHGVIDSPDIPLNVSRSYLQSDSNVKKISTYITKKVSDRLQSIFKNDRKQ-FEEKWNDLKIFINYG 375          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BACFR (Chaperone protein htpG OS=Bacteroides fragilis GN=htpG PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.924e-17
Identity = 53/196 (27.04%), Postives = 103/196 (52.55%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDS---GKPQRLAPLL----RFYTSKSEEELI 730
            N+T P+W + P E+  ++Y +FY++ +    +PL + H   +       +LY P +   +N ++   K   I+LY  +V+++D  +G + P +L+ + GV+DS D+PLNVSR  LQ    V+ +   + +K  D +Q I +++ +  +++ W +   F+  G +       K Q+ A       ++YT +  + LI
Sbjct:  221 NDTIPLWTKKPSELSDEDYKKFYRELYPMSDEPLFWIHLNVDYPFHLTGILYFPKVK--SNIDLNKNK---IQLYCNQVYVTDSVEG-IVPDFLTLLHGVLDSPDIPLNVSRSYLQSDSNVKKISTYISKKVSDRLQSIFKND-RAQFEEKWNDLKIFINYGMLTQEDFYDKAQKFALFTDTDGKYYTFEEYQTLI 409          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BACFN (Chaperone protein htpG OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.515e-17
Identity = 46/162 (28.40%), Postives = 90/162 (55.56%), Query Frame = 2
Query:  164 NETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLG 649
            N+T P+W + P E+  ++Y +FY++ +    +PL + H   +       +LY P +   +N ++   K   I+LY  +V+++D  +G + P +L+ + GV+DS D+PLNVSR  LQ    V+ +   + +K  D +Q I +++ +  +++ W +   F+  G
Sbjct:  221 NDTIPLWTKKPSELSDEDYKKFYRELYPMSDEPLFWIHLNVDYPFHLTGILYFPKVK--SNIDLNKNK---IQLYCNQVYVTDSVEG-IVPDFLTLLHGVLDSPDIPLNVSRSYLQSDSNVKKISTYISKKVSDRLQSIFKND-RAQFEEKWNDLKIFINYG 375          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS904_HUMAN (Putative heat shock protein HSP 90-alpha A4 OS=Homo sapiens GN=HSP90AA4P PE=5 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.451e-16
Identity = 45/96 (46.88%), Postives = 62/96 (64.58%), Query Frame = 2
Query:  215 EYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSRE 502
            EY EFYK     + D LA  HF+ EG++EFR+ L++P + P    E    K K I+L  +R  I D+ + EL P YL+F++GVVDS+DLPLN+ RE
Sbjct:  112 EYREFYKSLTINWEDYLAVKHFSVEGQLEFRAFLFVPRLAPFELLETRKKKNK-IKLSARRDLIMDNCE-ELIPEYLNFIRGVVDSEDLPLNIFRE 205          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HS902_HUMAN (Putative heat shock protein HSP 90-alpha A2 OS=Homo sapiens GN=HSP90AA2 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.310e-12
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 2
Query:  143 YWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIP 325
            Y D E  N+TKPIW RNP +I  +EY EF K   N++ D LA  HF+ EG++EFR++L++P
Sbjct:  283 YIDQEELNKTKPIWTRNPDDITNEEYGEFCKNLTNDWEDHLAVKHFSVEGQLEFRALLFVP 343          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
TRAP1_BOVIN6.726e-2230.89Heat shock protein 75 kDa, mitochondrial OS=Bos ta... [more]
TRAP1_DICDI1.147e-2132.42TNF receptor-associated protein 1 homolog, mitocho... [more]
HTPG_PORGI8.222e-2027.93Chaperone protein htpG OS=Porphyromonas gingivalis... [more]
HTPG_PORG38.222e-2027.93Chaperone protein htpG OS=Porphyromonas gingivalis... [more]
HTPG_BACTN4.081e-1930.49Chaperone protein htpG OS=Bacteroides thetaiotaomi... [more]
HTPG_BACFR2.924e-1727.04Chaperone protein htpG OS=Bacteroides fragilis GN=... [more]
HTPG_BACFN6.515e-1728.40Chaperone protein htpG OS=Bacteroides fragilis (st... [more]
HS904_HUMAN1.451e-1646.88Putative heat shock protein HSP 90-alpha A4 OS=Hom... [more]
HS902_HUMAN6.310e-1250.82Putative heat shock protein HSP 90-alpha A2 OS=Hom... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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