FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PSEAE (Chaperone protein htpG OS=Pseudomonas aeruginosa GN=htpG PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.104e-40
Identity = 82/184 (44.57%), Postives = 121/184 (65.76%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            +WE  N    +W R   E++ +EY EFYK   ++F +PL++SH   EG++E+ S+LY+PG  P +      P  + ++LYV+RVFI D  D E  P YL F+KGVVDS+DL LNVSREILQ+  ++  M+  L ++  DM++ ++++E  E YK FW+NFG+ LK G  ED G  +++A LLRF
Sbjct:  229 EWETVNRASALWTRPRAEVKDEEYQEFYKHVAHDFENPLSWSHNKVEGKLEYTSLLYVPGRAPFDLYHREAP--RGLKLYVQRVFIMDQAD-EFLPLYLRFIKGVVDSNDLSLNVSREILQKDPVIDSMKSALTKRVLDMLEKLAKNE-PEQYKTFWKNFGQVLKEGPAEDFGNKEKIAGLLRF 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PSEA7 (Chaperone protein htpG OS=Pseudomonas aeruginosa (strain PA7) GN=htpG PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.104e-40
Identity = 82/184 (44.57%), Postives = 121/184 (65.76%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            +WE  N    +W R   E++ +EY EFYK   ++F +PL++SH   EG++E+ S+LY+PG  P +      P  + ++LYV+RVFI D  D E  P YL F+KGVVDS+DL LNVSREILQ+  ++  M+  L ++  DM++ ++++E  E YK FW+NFG+ LK G  ED G  +++A LLRF
Sbjct:  229 EWETVNRASALWTRPRAEVKDEEYQEFYKHVAHDFENPLSWSHNKVEGKLEYTSLLYVPGRAPFDLYHREAP--RGLKLYVQRVFIMDQAD-EFLPLYLRFIKGVVDSNDLSLNVSREILQKDPVIDSMKSALTKRVLDMLEKLAKNE-PEQYKTFWKNFGQVLKEGPAEDFGNKEKIAGLLRF 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_NITOC (Chaperone protein htpG OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=htpG PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.459e-40
Identity = 82/184 (44.57%), Postives = 127/184 (69.02%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            +WE  N+   +W     +I+++EY  FYK   ++F DPLA++H   EG++E+ S+L+IP   P +  E    +T+ I+LYV+RVFI DD + +L PRYL FV+GVVDS+DLPLN+SREILQ +R++  +R   V+K   +++D+++ E K+ Y+ FW+ FG+ +K G  EDSG  +++A LLRF
Sbjct:  229 EWEQINKATALWTLPKNDIKEEEYQAFYKHVAHDFEDPLAWTHNRVEGKLEYTSLLFIPPRAPFDLWE--RDRTQGIKLYVQRVFIMDDTE-QLMPRYLRFVRGVVDSNDLPLNISREILQNNRVIDSIRAGSVKKILGLLEDMAKHEAKK-YQSFWKEFGQVMKEGVGEDSGNREQIARLLRF 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_AERS4 (Chaperone protein htpG OS=Aeromonas salmonicida (strain A449) GN=htpG PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.194e-40
Identity = 84/193 (43.52%), Postives = 122/193 (63.21%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            +WE  N    +W RNPKEI+ +EY EFYK   ++F DPL + H   EG  E+ S+LY+P   P    ++ N + K+ ++LYV+RVFI DD + +  P YL FVKGV+DS+DLPLNVSREILQ++++   +RK   ++   M+  +++ ++ E Y KFW  FG  LK G  ED    + +A LLRF ++  E E
Sbjct:  234 EWEQVNRATALWTRNPKEIKDEEYQEFYKHVAHDFEDPLLWGHNRVEGAQEYTSLLYVPARAPF---DLYNREQKHGLKLYVQRVFIMDDAE-QFMPTYLRFVKGVLDSNDLPLNVSREILQDNKVTVSLRKACSKRVLTMLAKLAK-DDAEKYAKFWSEFGNVLKEGPAEDYANREEIAKLLRFASTAGEGE 421          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ERWCT (Chaperone protein htpG OS=Erwinia carotovora subsp. atroseptica GN=htpG PE=3 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 5.477e-40
Identity = 82/190 (43.16%), Postives = 126/190 (66.32%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W R+  E+  DEY+EFYK   ++F DPL++SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ+SR+ + +R  L ++   M+  +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF T++S+
Sbjct:  227 WEKINKAQALWTRSKSEVSDDEYNEFYKHISHDFTDPLSWSHNRVEGKQEYTSLLYIPAHAPW---DMWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDSRVTQNLRNALTKRVLQMLDKLAK-DDAEKYQTFWQQFGLVLKEGPAEDGSNREAIAKLLRFATTQSD 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SALTY (Chaperone protein htpG OS=Salmonella typhimurium GN=htpG PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.153e-40
Identity = 82/190 (43.16%), Postives = 125/190 (65.79%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI+ DEY+EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRNKSEIKDDEYNEFYKHIAHDFTDPLTWSHNRVEGKQEYTSLLYIPSQAPW---DLWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDSTVTRNLRSALTKRVLQMLEKLAK-DDAEKYQTFWKQFGLVLKEGPAEDHANQEAIAKLLRFASTHTD 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SALTI (Chaperone protein htpG OS=Salmonella typhi GN=htpG PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.153e-40
Identity = 82/190 (43.16%), Postives = 125/190 (65.79%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI+ DEY+EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRNKSEIKDDEYNEFYKHIAHDFTDPLTWSHNRVEGKQEYTSLLYIPSQAPW---DLWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDSTVTRNLRSALTKRVLQMLEKLAK-DDAEKYQTFWKQFGLVLKEGPAEDHANQEAIAKLLRFASTHTD 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SALPB (Chaperone protein htpG OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=htpG PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.153e-40
Identity = 82/190 (43.16%), Postives = 125/190 (65.79%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI+ DEY+EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRNKSEIKDDEYNEFYKHIAHDFTDPLTWSHNRVEGKQEYTSLLYIPSQAPW---DLWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDSTVTRNLRSALTKRVLQMLEKLAK-DDAEKYQTFWKQFGLVLKEGPAEDHANQEAIAKLLRFASTHTD 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SALPA (Chaperone protein htpG OS=Salmonella paratyphi A GN=htpG PE=3 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 7.153e-40
Identity = 82/190 (43.16%), Postives = 125/190 (65.79%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI+ DEY+EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRNKSEIKDDEYNEFYKHIAHDFTDPLTWSHNRVEGKQEYTSLLYIPSQAPW---DLWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDSTVTRNLRSALTKRVLQMLEKLAK-DDAEKYQTFWKQFGLVLKEGPAEDHANQEAIAKLLRFASTHTD 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SALCH (Chaperone protein htpG OS=Salmonella choleraesuis GN=htpG PE=3 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 7.153e-40
Identity = 82/190 (43.16%), Postives = 125/190 (65.79%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI+ DEY+EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A LLRF ++ ++
Sbjct:  224 WEKINKAQALWTRNKSEIKDDEYNEFYKHIAHDFTDPLTWSHNRVEGKQEYTSLLYIPSQAPW---DLWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDSTVTRNLRSALTKRVLQMLEKLAK-DDAEKYQTFWKQFGLVLKEGPAEDHANQEAIAKLLRFASTHTD 408          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_PSEAE1.104e-4044.57Chaperone protein htpG OS=Pseudomonas aeruginosa G... [more]
HTPG_PSEA71.104e-4044.57Chaperone protein htpG OS=Pseudomonas aeruginosa (... [more]
HTPG_NITOC2.459e-4044.57Chaperone protein htpG OS=Nitrosococcus oceani (st... [more]
HTPG_AERS44.194e-4043.52Chaperone protein htpG OS=Aeromonas salmonicida (s... [more]
HTPG_ERWCT5.477e-4043.16Chaperone protein htpG OS=Erwinia carotovora subsp... [more]
HTPG_SALTY7.153e-4043.16Chaperone protein htpG OS=Salmonella typhimurium G... [more]
HTPG_SALTI7.153e-4043.16Chaperone protein htpG OS=Salmonella typhi GN=htpG... [more]
HTPG_SALPB7.153e-4043.16Chaperone protein htpG OS=Salmonella paratyphi B (... [more]
HTPG_SALPA7.153e-4043.16Chaperone protein htpG OS=Salmonella paratyphi A G... [more]
HTPG_SALCH7.153e-4043.16Chaperone protein htpG OS=Salmonella choleraesuis ... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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