FC868718

Overview
NameFC868718
Unique NameFC868718
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_AERHH (Chaperone protein htpG OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=htpG PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.153e-40
Identity = 84/193 (43.52%), Postives = 121/193 (62.69%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            +WE  N    +W RNPKEI+ +EY EFYK   ++F DPL + H   EG  E+ S+LY+P   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FVKGV+DS+DLPLNVSREILQ++++   +RK   ++   M+  +++ ++ E Y KFW  FG  LK G  ED    + +A LLRF ++  E E
Sbjct:  238 EWEQVNRATALWTRNPKEIKDEEYQEFYKHVAHDFEDPLLWGHNRVEGAQEYTSLLYVPARAPF---DLYNRDQKHGLKLYVQRVFIMDDAE-QFMPAYLRFVKGVLDSNDLPLNVSREILQDNKVTVSLRKACSKRVLTMLAKLAK-DDAEKYAKFWSEFGNVLKEGPAEDYANREEIAKLLRFASTAGEGE 425          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_NITMU (Chaperone protein htpG OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=htpG PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.342e-40
Identity = 83/193 (43.01%), Postives = 120/193 (62.18%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQS---ENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            E  N+   +W R   EI +++Y+EFYK   ++F  PLAY H   EG+ E+  +LY+P   P +  +        I+LYV+RVFI DD   +L P YL FV+G++DS+DLPLNVSREILQES+ +  MR   V+K   ++ D++QS   E K  +K FW+ FG+ +K G  ED    +R+A LLRF ++ S+ E
Sbjct:  232 ETINQASALWARPKNEISEEQYNEFYKHVAHDFEPPLAYVHARVEGKQEYTQLLYVPSRAPFDLYD--RESRHGIKLYVRRVFIMDDAK-QLLPNYLRFVRGIIDSNDLPLNVSREILQESKDIEAMRAGSVKKVLGLLDDLAQSETDEGKAKFKTFWKEFGQVMKEGVAEDYANRERIAKLLRFVSTHSDSE 421          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ACIF5 (Chaperone protein htpG OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=htpG PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.220e-39
Identity = 82/192 (42.71%), Postives = 125/192 (65.10%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            +WE  N+   +W R+  EI  DEY EFY+   +++ DPL +SH   EG +E+ S+L+IP   P +  +  +P    I+LYV+RVFI DD + +L PRYL FV+GV+DS DLPLNVSREILQ +R++  MR   V++   +++++++ E  E Y+ FW  FGR LK G  ED    +++A LLRF ++ ++ +
Sbjct:  224 EWETVNKASALWQRSKSEISDDEYKEFYRYVSHDYGDPLTWSHNHVEGRLEYTSLLFIPAKAPFDLWDHNHP--HGIKLYVQRVFIMDDAE-QLLPRYLRFVRGVIDSSDLPLNVSREILQGNRVIDQMRSGSVKRILGLLEEMAEKE-PEKYQTFWNEFGRVLKEGPGEDYSNREQIARLLRFASTHTDTD 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_ACIF2 (Chaperone protein htpG OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=htpG PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.220e-39
Identity = 82/192 (42.71%), Postives = 125/192 (65.10%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSEEE 724
            +WE  N+   +W R+  EI  DEY EFY+   +++ DPL +SH   EG +E+ S+L+IP   P +  +  +P    I+LYV+RVFI DD + +L PRYL FV+GV+DS DLPLNVSREILQ +R++  MR   V++   +++++++ E  E Y+ FW  FGR LK G  ED    +++A LLRF ++ ++ +
Sbjct:  224 EWETVNKASALWQRSKSEISDDEYKEFYRYVSHDYGDPLTWSHNHVEGRLEYTSLLFIPAKAPFDLWDHNHP--HGIKLYVQRVFIMDDAE-QLLPRYLRFVRGVIDSSDLPLNVSREILQGNRVIDQMRSGSVKRILGLLEEMAEKE-PEKYQTFWNEFGRVLKEGPGEDYSNREQIARLLRFASTHTDTD 411          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_PSEMY (Chaperone protein htpG OS=Pseudomonas mendocina (strain ymp) GN=htpG PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.594e-39
Identity = 81/190 (42.63%), Postives = 121/190 (63.68%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            +WE  N    +W R   E++ +EY EFYK   ++F +PL +SH   EG++E+ S+LY+PG  P +      P  K ++LYV+RVFI D  D E  P YL F+KGVVDS+DL LNVSREILQ+  ++  M+  L ++  DM++ +++ +  E+YK FW+ FG+ LK G  ED    +++A LLRF ++  E
Sbjct:  229 EWETVNRASALWTRPRAEVKDEEYQEFYKHVAHDFENPLTWSHNKVEGKLEYTSLLYVPGRAPFDLYHREAP--KGLKLYVQRVFIMDQAD-EFLPLYLRFIKGVVDSNDLSLNVSREILQKDPVIDSMKSALTKRVLDMLEKLAK-DKPEEYKAFWKAFGQVLKEGPAEDFANKEKIAGLLRFASTAGE 414          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_METFK (Chaperone protein htpG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=htpG1 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.594e-39
Identity = 84/195 (43.08%), Postives = 128/195 (65.64%), Query Frame = 2
Query:  155 ELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYT--SKSEEELIS 733
            E  N+   +W RN  +I + EY EFYK   ++F +PL +SH   EG+ E+ S+LYIP   P +  +    +   I+LYVKRVFI DD + +L P+YL FV+GV+DS DLPLNVSREILQ S+ +  ++   V++   M++D+++++  E+Y KFW+ FGR LK G  ED    +R+A LLRF +  + ++E+++S
Sbjct:  229 ETVNKASALWARNKSDISEQEYQEFYKHVSHDFENPLTWSHNRVEGKQEYISLLYIPSKAPFDLYD--RERQHGIKLYVKRVFIMDDAE-QLMPQYLRFVRGVIDSADLPLNVSREILQHSKDIEAIKTASVKRVLSMLEDLAENK-PEEYAKFWKEFGRVLKEGPGEDFANKERIAGLLRFASTHADTDEQVVS 419          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_CITK8 (Chaperone protein htpG OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=htpG PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.594e-39
Identity = 81/190 (42.63%), Postives = 125/190 (65.79%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W RN  EI+ DEY+EFYK   ++F DPL +SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI DD + +  P YL FV+G++DS+DLPLNVSREILQ+S + R +R  L ++   M++ +++ ++ E Y+ FW+ FG  LK G  ED    + +A L+RF ++ ++
Sbjct:  224 WEKINKAQALWTRNKSEIKDDEYNEFYKHIAHDFTDPLTWSHNRVEGKQEYTSLLYIPSQAPW---DMWNRDHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDSTVTRNLRSALTKRVLQMLEKLAK-DDAEKYQTFWKQFGLVLKEGPAEDHANQEAIAKLMRFASTHTD 408          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_IDILO (Chaperone protein htpG OS=Idiomarina loihiensis GN=htpG PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.081e-39
Identity = 84/192 (43.75%), Postives = 124/192 (64.58%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGP--LNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            +WE  N  + +W R   +I  +EY EFYK   ++F +PL +SH   EG  E+ ++LYIP   P  L N E    +   ++LYVKRVFI DD + +L P YL FV+G+VDS+DLPLNVSREILQ+++I R MR    +K   M++ +++ ++KE Y++FW+ FG  LK G  ED    +R+A LLRF ++ ++
Sbjct:  235 EWETVNSGQALWTREKSDITDEEYKEFYKTVAHDFDEPLLWSHNKVEGTTEYTNLLYIPKRAPWDLWNRE----QQHGVKLYVKRVFIMDDAE-QLMPTYLRFVRGLVDSNDLPLNVSREILQDNKITRAMRNGSTKKVLQMLKKLAK-DDKEQYQQFWDTFGNVLKEGPAEDHTNRERIAELLRFASTHND 420          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_BORA1 (Chaperone protein htpG OS=Bordetella avium (strain 197N) GN=htpG PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.081e-39
Identity = 81/184 (44.02%), Postives = 118/184 (64.13%), Query Frame = 2
Query:  149 DWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRF 700
            +WE  N+   +W R+  EI  ++Y EFYK   + F +PLA++H   EG  E+  +LY+P   P +  +      + ++LYVKRVFI DD + +L P YL FV+GV+DS DLPLNVSREILQESR VR +R+   ++   +++D++++  K+DY  FW  FG+ LK G  ED    +R+A LLRF
Sbjct:  228 EWETVNQANALWTRSKSEISDEQYREFYKTVSHGFDEPLAWTHNRVEGRSEYTQLLYVPRQAPFDLWD--RDARRGVKLYVKRVFIMDDAE-QLLPAYLRFVRGVIDSADLPLNVSREILQESRDVRAIREGSAKRILSLLEDLAEN-RKDDYAVFWGEFGQVLKEGVGEDPSNQERIAKLLRF 407          
BLAST of FC868718 vs. ExPASy Swiss-Prot
Match: HTPG_SERP5 (Chaperone protein htpG OS=Serratia proteamaculans (strain 568) GN=htpG PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.718e-39
Identity = 80/190 (42.11%), Postives = 128/190 (67.37%), Query Frame = 2
Query:  152 WELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYSHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGKPQRLAPLLRFYTSKSE 718
            WE  N+ + +W R+  ++  +EY EFYK   ++F DPL++SH   EG+ E+ S+LYIP   P    ++ N   K+ ++LYV+RVFI D+ + +  P YL FV+G++DS+DLPLNVSREILQ+SR+ + +R  L ++   M++ +++ ++ E Y+KFW+ FG  LK G  ED+   + +A LLRF +++SE
Sbjct:  224 WEKINKAQALWTRSKADVTDEEYKEFYKHIAHDFTDPLSWSHNRVEGKQEYTSLLYIPAQAPW---DMWNRDHKHGLKLYVQRVFIMDEAE-QFMPNYLRFVRGLIDSNDLPLNVSREILQDSRVTQNLRGALTKRVLQMLEKLAK-DDAEGYQKFWQQFGLVLKEGPAEDANNKETIAKLLRFASTQSE 408          
The following BLAST results are available for this feature:
BLAST of FC868718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HTPG_AERHH7.153e-4043.52Chaperone protein htpG OS=Aeromonas hydrophila sub... [more]
HTPG_NITMU9.342e-4043.01Chaperone protein htpG OS=Nitrosospira multiformis... [more]
HTPG_ACIF51.220e-3942.71Chaperone protein htpG OS=Acidithiobacillus ferroo... [more]
HTPG_ACIF21.220e-3942.71Chaperone protein htpG OS=Acidithiobacillus ferroo... [more]
HTPG_PSEMY1.594e-3942.63Chaperone protein htpG OS=Pseudomonas mendocina (s... [more]
HTPG_METFK1.594e-3943.08Chaperone protein htpG OS=Methylobacillus flagella... [more]
HTPG_CITK81.594e-3942.63Chaperone protein htpG OS=Citrobacter koseri (stra... [more]
HTPG_IDILO2.081e-3943.75Chaperone protein htpG OS=Idiomarina loihiensis GN... [more]
HTPG_BORA12.081e-3944.02Chaperone protein htpG OS=Bordetella avium (strain... [more]
HTPG_SERP52.718e-3942.11Chaperone protein htpG OS=Serratia proteamaculans ... [more]

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Properties
Property NameValue
Genbank descriptionC31003H08EF AbioticL1 Citrus clementina cDNA clone C31003H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868718 ID=FC868718; Name=FC868718; organism=Citrus clementina; type=EST; length=734bp
CTGAGAGTTTGTTTCTTTCCCCTTCTATACCTGGCAAGAAAAGTCAAGGA
CCATTGAGGTGGAAGAGGAGGAAAAACCAGAAGAAGGGGAAGAACAACCG
GAGGGTGAAAAGAAAACGAAGAAAACAACTAAAACTGAGAAGTATTGGGA
CTGGGAACTGGCCAATGAAACAAAACCTATATGGATGCGGAACCCAAAAG
AAATTGAAAAAGATGAGTACCACGAATTCTATAAGAAGACTTTCAATGAA
TTTTTGGATCCCCTTGCATACAGTCACTTCACAACAGAGGGTGAGGTGGA
ATTCAGGAGTGTTCTTTACATTCCTGGAATGGGACCTCTAAACAATGAGG
AAATTATGAATCCAAAAACAAAGAACATACGATTGTATGTCAAGCGTGTG
TTTATCTCTGATGATTTTGATGGAGAACTGTTTCCAAGATACTTGAGCTT
TGTAAAGGGTGTGGTGGACTCAGATGATCTGCCTCTCAATGTTTCTCGAG
AGATCCTTCAAGAAAGCAGAATTGTAAGAATTATGAGAAAGAGACTGGTC
AGGAAAACATTTGACATGATTCAGGATATCTCTCAAAGTGAAAACAAAGA
GGATTATAAGAAATTCTGGGAGAACTTTGGTAGGTTTCTAAAATTAGGTT
GTGTTGAAGATAGTGGGAAACCACAGCGCTTAGCACCTTTGCTGCGGTTT
TACACTTCAAAGAGTGAAGAGGAACTGATCAGCT
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