FC868719

Overview
NameFC868719
Unique NameFC868719
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length591
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC868719 vs. ExPASy Swiss-Prot
Match: Y2098_STAAN (Putative 2-hydroxyacid dehydrogenase SA2098 OS=Staphylococcus aureus (strain N315) GN=SA2098 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.879e-11
Identity = 35/92 (38.04%), Postives = 45/92 (48.91%), Query Frame = 2 
Query:  314 KAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTIGVIGAGRIRSA 589
            K  +N   G+NN+D+  A +  I V NTP                   RRIVE D+  R   +DGW P  F G  + G+TIG+IG G I SA
Sbjct:   68 KIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSA 159
The following BLAST results are available for this feature:
BLAST of FC868719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
Y2098_STAAN7.879e-1138.04Putative 2-hydroxyacid dehydrogenase SA2098 OS=Sta... [more]

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Properties
Property NameValue
Genbank descriptionC31003H10EF AbioticL1 Citrus clementina cDNA clone C31003H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868719 ID=FC868719; Name=FC868719; organism=Citrus clementina; type=EST; length=591bp
AGCACACGCTCTGTCTTTGGCACTTGGAACTTGAAACTGCCAACTTAGCT
TCAATGGCGAACCAGTTTCGATTGCAGTGTGGAACCCAAATGGAAAATAC
AGAGTTGTTAGTACCAAGCCTATGCCTGGAACCCGCTGGATCAATCTCTT
AATCGAACAAGATTGCCGTGTTGAAATATGCACCCAGAAGAAAACTATAC
TCTCTGTTGAAGATATCATTGCTTTGATTGGTGACAAGTGCGATGGAGTC
ATTGGACAGTTGACAGAGGACTGGGGAGAGACTTTGTTTGCTGCACTGAG
TAGAGCAGGAGGAAAGGCTTTTAGTAACATGGCTGTTGGTTACAACAATG
TTGACGTTAATGCTGCTAACAAATATGGTATTGCTGTTGGAAACACTCCT
GGAGTACTTACAGAAACAACAGCAGAGTTAGCAGCTTCGCTCTCTCTAGC
GGCTGCAAGAAGAATTGTTGAAGCAGATGAGTTTATGAGAGCTGGCTTAT
ACGATGGATGGCTTCCAAATCTGTTCGTTGGGAACTTGCTCAAGGGACAG
ACTATTGGTGTGATTGGAGCTGGTCGTATAAGATCTGCCTA
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