FC868726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_CYAA5 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain ATCC 51142) GN=trpA PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 5.142e-54 Identity = 101/190 (53.16%), Postives = 139/190 (73.16%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 ++E F L+ + + LIP+ITAGDPDL TTA+AL++LD+ G+D+IELGVPYSDPLADGPVIQAAA+R+L RG +L+++K V I PI LF+YYNPI RG++ F+ ++ G++GLVVPD+PLEE E+L K A + IE+ L PT+P +R+KAI S+GF+YL S GVTG R ++ V+ Sbjct: 4 VSECFQSLRDRKQCGLIPFITAGDPDLETTAKALRVLDASGADLIELGVPYSDPLADGPVIQAAASRALRRGVKLEDVLNIVKGVQGDIKAPIILFSYYNPIFYRGIEAFLEQIKSAGVKGLVVPDLPLEEAETLLKPAAEMGIEVTLLVAPTSPIERIKAIAHQSQGFIYLVSVTGVTGMRTQVATRVE 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_SYNP6 (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=trpA PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 6.285e-52 Identity = 101/189 (53.44%), Postives = 133/189 (70.37%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 +++ F L+ QG+ ALIP++TAGDPDL TT +AL LD G+D+IELGVPYSDPLADGPVIQAAATR+L GT + +L++LK+V QI PI LFTY NPIL RG + F+ + G GLVVPD+PLEE++ L + A + I+L+L PT+ DR+ AI + + GF+YL S GVTG R + V Sbjct: 4 ISDCFAALRSQGRCALIPFLTAGDPDLETTRQALLALDREGADLIELGVPYSDPLADGPVIQAAATRALQAGTRLDDVLALLKDVRSQIKAPIVLFTYCNPILNRGFEAFLDQIAAAGANGLVVPDLPLEESQRLSEVAAERGIDLILLIAPTSSADRIAAISKQARGFIYLVSVTGVTGMRQGMQSRV 192
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_SYNE7 (Tryptophan synthase alpha chain OS=Synechococcus elongatus (strain PCC 7942) GN=trpA PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 6.285e-52 Identity = 101/189 (53.44%), Postives = 133/189 (70.37%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 +++ F L+ QG+ ALIP++TAGDPDL TT +AL LD G+D+IELGVPYSDPLADGPVIQAAATR+L GT + +L++LK+V QI PI LFTY NPIL RG + F+ + G GLVVPD+PLEE++ L + A + I+L+L PT+ DR+ AI + + GF+YL S GVTG R + V Sbjct: 4 ISDCFAALRSQGRCALIPFLTAGDPDLETTRQALLALDREGADLIELGVPYSDPLADGPVIQAAATRALQAGTRLDDVLALLKDVRSQIKAPIVLFTYCNPILNRGFEAFLDQIAAAGANGLVVPDLPLEESQRLSEVAAERGIDLILLIAPTSSADRIAAISKQARGFIYLVSVTGVTGMRQGMQSRV 192
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PROMA (Tryptophan synthase alpha chain OS=Prochlorococcus marinus GN=trpA PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.949e-51 Identity = 98/191 (51.31%), Postives = 134/191 (70.16%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQL 733 L F++ KK+G++AL+P+I AGDPD++T+AE L +L+ G+DIIELG+PYSDPLADGP+IQ AA+R+L GT+ ++L ML + ++S PI LFTY NP+L G++ F G GLVVPD+PLEETE L A+ ++LVL PTTP +RM+ I + S GF YL S GVTG R+++ VQL Sbjct: 6 LERCFSQSKKEGRIALMPFIMAGDPDVNTSAEILIMLEKKGADIIELGIPYSDPLADGPIIQKAASRALNSGTSPKSVLEMLSTLKTKLSVPIILFTYSNPLLNYGMEEFCIDASKAGAAGLVVPDLPLEETEKLSSIALSKNLDLVLLVAPTTPKERMRKISQRSNGFTYLVSVTGVTGERSALENRVQL 196
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_SYNS9 (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain CC9902) GN=trpA PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50 Identity = 98/198 (49.49%), Postives = 136/198 (68.69%), Query Frame = 2 Query: 137 LTASPTVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 +++ + +A F +LK++G++AL+P++ AGDPDLS TAE L L + G+D++ELG+PYSDPLADGPVIQAAA R+LA GT +L ML + Q+S P+ LFTY NP+L G++ F + G GLVVPD+PLEE E L A + ++LVL PTTPT+RM I ++S GF YL S GVTG R+++ V+ Sbjct: 1 MSSQQSSSIALRFEQLKREGRMALMPFLMAGDPDLSVTAEVLLSLQAAGADMVELGMPYSDPLADGPVIQAAAARALAAGTTPKKVLEMLSSLRGQLSIPVILFTYSNPLLNVGMERFCEQAAEAGASGLVVPDLPLEEAERLSPIAEREGLDLVLLVAPTTPTERMGRIAQSSRGFTYLVSVTGVTGERSTMETRVE 198
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PROMT (Tryptophan synthase alpha chain OS=Prochlorococcus marinus (strain NATL2A) GN=trpA PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50 Identity = 95/192 (49.48%), Postives = 136/192 (70.83%), Query Frame = 2 Query: 152 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 + ++ +F+++KK+ ++AL+P++ AGDPDL TTA+ L L + G+D+IELG+PYSDPLADGP+IQ AA+R+L+ GT+ + + ML E+ Q++ PI LFTY NP++ +G++ F +G+ GLVVPD+PLEE E L A +I+LVL PTTP DRMK I S GF YL S GVTG R+S+ +V Sbjct: 3 STNISRSFSKIKKEKRIALMPFLMAGDPDLETTAKILLELQANGADMIELGIPYSDPLADGPIIQLAASRALSAGTSPDRVFKMLFELRDQLTIPIILFTYSNPLINKGLEEFCLQASKVGVSGLVVPDLPLEEAEKLSDIAESKEIDLVLLVAPTTPKDRMKRIAATSNGFTYLVSVTGVTGERSSLEDNV 194
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PROM1 (Tryptophan synthase alpha chain OS=Prochlorococcus marinus (strain NATL1A) GN=trpA PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.641e-50 Identity = 95/192 (49.48%), Postives = 135/192 (70.31%), Query Frame = 2 Query: 152 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 + ++ +F+++KK+ ++AL+P++ AGDPDL TTA+ L L + G+D+IELG+PYSDPLADGP+IQ AA+R+L+ GT+ + + ML E+ Q+ PI LFTY NP++ +G++ F +G+ GLVVPD+PLEE E L A +I+LVL PTTP DRMK I S GF YL S GVTG R+S+ +V Sbjct: 3 STNISRSFSKIKKEKRIALMPFLMAGDPDLETTAKILLELQANGADMIELGIPYSDPLADGPIIQLAASRALSAGTSPDRVFKMLFELRDQLKIPIILFTYSNPLINKGLEEFCWQASKVGVSGLVVPDLPLEEAEKLSDIAESKEIDLVLLVAPTTPKDRMKKIAATSNGFTYLVSVTGVTGERSSLEDNV 194
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PROMM (Tryptophan synthase alpha chain OS=Prochlorococcus marinus (strain MIT 9313) GN=trpA PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.504e-50 Identity = 97/190 (51.05%), Postives = 131/190 (68.95%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 ++ F R++ +G++AL+P++ AGDPDL TTAE L L+ G+D+IELG+PYSDPLADGPVIQAAA+R+LA GT +L ML ++ ++S P+ LFTY NP+ RG++ F + G+ GLVVPD+PLEE E L A ++LVL PTTP +RM I E+S GF YL S GVTG R+ + VQ Sbjct: 15 ISSRFQRVQAEGRLALMPFLMAGDPDLETTAEVLLSLEQSGADMIELGIPYSDPLADGPVIQAAASRALASGTTPARVLQMLIDLRGKLSIPVILFTYTNPLFNRGMERFCDEAAEAGVAGLVVPDLPLEEAERLSPLASARGLDLVLLVAPTTPAERMARIAESSRGFTYLVSVTGVTGERSVMEDRVQ 204
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_GLOVI (Tryptophan synthase alpha chain OS=Gloeobacter violaceus GN=trpA PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.109e-48 Identity = 93/190 (48.95%), Postives = 133/190 (70.00%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 +A F L + +VA IP+ITAGDPDL TTAEAL LD G+D++ELG+PYSDPLADGP IQAAATR+LARGT A+L ++ + P++ P+ +FTY+N IL G++ F+ + G GL+VPD+P+EE ++LQ A ++++ PT+P +R++ I E + GFVYL S+ GVTGAR ++ V+ Sbjct: 10 IARVFAALHARREVAFIPFITAGDPDLETTAEALLTLDRNGADLLELGLPYSDPLADGPTIQAAATRALARGTTPGAVLDLVARLTPELRAPLIVFTYFNLILAVGIEAFVERLAASGASGLLVPDLPVEEGDALQTAANVQGLDVIWLVAPTSPPERLRRIAERTTGFVYLVSTTGVTGARTQVASSVR 199
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PORYE (Tryptophan synthase alpha chain OS=Porphyra yezoensis GN=trpA PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.893e-48 Identity = 94/190 (49.47%), Postives = 135/190 (71.05%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 ++ F L KQ ALIP+ITAGDPDL +T +AL++LDS G+DIIELG+PYSDPLADGP+IQ A+ R+L +G N N ILSM+K V I PI LFTYYNP+L G++NF+ + + GIRGL++PD+P+EE+E + IEL+L PT+ +R+ I++ + G +YL S+ GVTG ++ ++ ++ Sbjct: 4 ISSVFENLDKQ--CALIPFITAGDPDLVSTGKALQILDSYGADIIELGLPYSDPLADGPIIQEASNRALKQGINLNKILSMVKTVNMTIKAPIVLFTYYNPVLHLGINNFIYAISNAGIRGLLIPDLPIEESEYVISVCNLFNIELILLLAPTSSRERISKIIKRAPGCIYLVSTTGVTGQKSQLTSQLK 191 The following BLAST results are available for this feature:
BLAST of FC868726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868726 ID=FC868726; Name=FC868726; organism=Citrus clementina; type=EST; length=736bpback to top |