FC868726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_RHOPT (Tryptophan synthase alpha chain OS=Rhodopseudomonas palustris (strain TIE-1) GN=trpA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.348e-37 Identity = 76/188 (40.43%), Postives = 116/188 (61.70%), Query Frame = 2 Query: 152 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARAS 712 T + F LK+QG+ AL+ ++ AGDPDL T+ + LK L + G+D+IE+G+P++DP+ADGP IQAA R+L GT L ++++ + P+ L YYNPI GVD F++ + G+ GL++ D+P EE E L AMK + + TPTT R+ A++ + GFVY S G+TG+ ++ Sbjct: 2 TTRIDTRFADLKQQGRPALVTFVMAGDPDLDTSLQILKALPAAGADVIEIGMPFTDPMADGPAIQAAGLRALKAGTTLKKTLGLVRDFRATDNATPLVLMGYYNPIYIYGVDAFLADAKAAGVDGLIIVDLPPEEDEELCLPAMKAGLNFIRLATPTTDEKRLPAVLANTSGFVYYVSITGITGSASA 189
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PSEA7 (Tryptophan synthase alpha chain OS=Pseudomonas aeruginosa (strain PA7) GN=trpA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.373e-37 Identity = 79/191 (41.36%), Postives = 114/191 (59.69%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 L F +LK+ + AL+ ++TAGDPD + E LK L + G+D+IELG+P++DP+ADGP IQ A R+L G L M++E P+ L Y+NPI GV+ F++ ++ G+ GL+V D+P E E L A I+ + TTPTT +R+ ++E S GFVY S GVTGA A+ HV+ Sbjct: 4 LQTRFAQLKQDNRAALVTFVTAGDPDYDASLEILKGLPAAGADVIELGMPFTDPMADGPAIQLANIRALQGGQTLAKTLRMVREFRAGDSDTPLVLMGYFNPIHHYGVERFVTEAKEAGVDGLIVVDLPPEHNEDLCHPAQAAGIDFIRLTTPTTGDERLPTVLEGSSGFVYYVSVAGVTGANAATLEHVE 194
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PSE14 (Tryptophan synthase alpha chain OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=trpA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.711e-37 Identity = 79/190 (41.58%), Postives = 116/190 (61.05%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 L + F +LK +G+ AL+ +ITAGDP T+ + LK L + G+D+IELG+P++DP+ADG IQ A R+L G L M+ E V + PI L YYNPI + GV+ F++ ++ G+ GL++ D+P E L A + I+ + TTPTT R+ ++E S GFVY S GVTGA ++ + HV Sbjct: 4 LEQRFAQLKTEGRAALVTFITAGDPGYDTSLQVLKGLPAAGADVIELGMPFTDPMADGVAIQLATLRALDAGQTLQKTLQMVSEFRVDDQTTPIVLMGYYNPIHRFGVEAFVAQAKEAGVDGLIIVDLPPEHDAELATPAQASGIDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHV 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_BACSK (Tryptophan synthase alpha chain OS=Bacillus clausii (strain KSM-K16) GN=trpA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.711e-37 Identity = 81/184 (44.02%), Postives = 118/184 (64.13%), Query Frame = 2 Query: 188 KQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-ISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQLF 736 K+G + IP+ITAGDP T L G+D++ELG+PYSDPLADGPVIQ A+ R+LA G ++++ E+ + ++ P+ +FTY NP+L+ G + F T D GI GL+VPD+P EE+E+L E K + L+ PT+ R+KAI ++GF+Y SS+GVTGAR ++ V+ F Sbjct: 10 KKGNL-FIPFITAGDPVREATIALALSLQRSGADVLELGIPYSDPLADGPVIQNASKRALAGGMTLAKAMALVPEMRKEGLTIPVIVFTYANPLLQFGFERFCETACDYGIDGLLVPDLPFEESETLANECEKQGLALISLVAPTS-QQRIKAIASRAQGFLYCVSSLGVTGARKTLHPQVEAF 191
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PSEU5 (Tryptophan synthase alpha chain OS=Pseudomonas stutzeri (strain A1501) GN=trpA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.459e-37 Identity = 81/191 (42.41%), Postives = 116/191 (60.73%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 L F LK+Q + AL+ +ITAGDPD +T+ + LK L + G+D+IELG+P++DP+ADGP IQ A R+LA + L M++E + PI L Y+NPI K GV+ F++ + G+ GL+V D+P E E L A I+ + TTPTT R+ ++ S GFVY S GVTGA ++ HV+ Sbjct: 4 LLTRFDELKQQNRAALVTFITAGDPDYATSLQILKGLPAAGADVIELGMPFTDPMADGPAIQLANIRALAAKQDLAKTLQMVREFRQDDQTTPIVLMGYFNPIHKMGVERFIAEAVEAGVDGLIVVDLPPEHNEDLCDPAQAAGIDFIRLTTPTTDDKRLPVVLNGSSGFVYYVSVAGVTGAGSATLEHVE 194
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PSEU2 (Tryptophan synthase alpha chain OS=Pseudomonas syringae pv. syringae (strain B728a) GN=trpA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.272e-36 Identity = 79/190 (41.58%), Postives = 115/190 (60.53%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 L F +LK +G+ AL+ +ITAGDP T+ + LK L + G+D+IELG+P++DP+ADG IQ A R+L G L M+ E V + PI L YYNPI + GV+ F++ ++ G+ GL++ D+P E L A + I+ + TTPTT R+ ++E S GFVY S GVTGA ++ + HV Sbjct: 4 LEHRFAQLKTEGRAALVTFITAGDPGYDTSLKVLKGLPAAGADVIELGMPFTDPMADGVAIQLATLRALDAGQTLQKTLQMVSEFRVDDQTTPIVLMGYYNPIHRFGVEAFVAQAKEAGVDGLIIVDLPPEHDAELATPAQASGIDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHV 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_RHOPS (Tryptophan synthase alpha chain OS=Rhodopseudomonas palustris (strain BisB5) GN=trpA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.662e-36 Identity = 77/193 (39.90%), Postives = 117/193 (60.62%), Query Frame = 2 Query: 152 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 T + F LKKQG+ A + ++ AGDPDL+T+ + LK L + G+DIIE+G+P++DP+ADGP IQAA R+L G + L ++++ + P+ L YYNPI GVD F++ + G+ GL++ D+P EE L AMK + + TPTT R+ A++ + GFVY S G+TG+ ++ S V Sbjct: 2 TTRIDTRFAELKKQGRSAFVTFVMAGDPDLATSLQVLKALPAAGADIIEIGMPFTDPMADGPAIQAAGLRALHSGATLSHTLGLVRDFRKDDDTTPMVLMGYYNPIYIYGVDAFLADAKAAGVDGLIIVDLPPEEDSELCLPAMKAGLNFIRLATPTTDEKRLPAVLANTSGFVYYVSITGITGSASADSAAV 194
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PSEPW (Tryptophan synthase alpha chain OS=Pseudomonas putida (strain W619) GN=trpA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.662e-36 Identity = 78/190 (41.05%), Postives = 115/190 (60.53%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 L + F LK +G+ AL+ ++TAGDP + + LK L + G+D+IELG+P++DP+ADG IQ A R+L G N L M++E V + PI L YYNPI + GV+ F++ ++ G+ GL++ D+P E L A I+ + TTPTT R+ ++E S GFVY S GVTGA ++ + HV Sbjct: 4 LEQRFAELKAEGRSALVTFVTAGDPGYDASLQILKGLPAAGADVIELGMPFTDPMADGVAIQLATLRALEAGQNLAKTLQMVREFRVDNQATPIVLMGYYNPIHRFGVEKFVAEAKEAGVDGLIIVDLPPEHDAELATPAQAAGIDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHV 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_AZOBR (Tryptophan synthase alpha chain OS=Azospirillum brasilense GN=trpA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.662e-36 Identity = 78/185 (42.16%), Postives = 112/185 (60.54%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARAS 712 +A F LK +G+ L+ +ITAGDPDL T L L + G+D+IELG+P+SDP+ADGP IQAA+ R+L GT L +++ P+ L YYNPI GVD F++ + G+ GL+V D+P EE E L A+K + + TPTT R+ A+++ + GFVY S G+TGA ++ Sbjct: 14 IARRFAALKAEGRAGLVTFITAGDPDLETCRAVLHGLPAAGADLIELGLPFSDPMADGPAIQAASLRALHAGTTARKTLDLVRGFRETDADTPVILMGYYNPIHAYGVDRFLADAIEAGVDGLIVVDLPPEEDEELCIPALKAGVNFIRLATPTTDDKRLPAVLQNTSGFVYYVSIAGITGAASA 198
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_GEOSM (Tryptophan synthase alpha chain OS=Geobacter sp. (strain M21) GN=trpA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.170e-36 Identity = 72/186 (38.71%), Postives = 115/186 (61.83%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASIS 718 +++ F LK++G+ AL+ ++TAGDPDL+TT + + L+ G+D++ELGVP+SDP+ADGP IQ ++ R+LA GT AIL ++ + + PI L Y+NPI G + F G+ L+V D+P EE L+ ++L+ TPT+ + R+ + GF+Y S GVTGAR++++ Sbjct: 4 ISDRFASLKERGEKALVTFVTAGDPDLATTEKVVLELERAGADLVELGVPFSDPMADGPTIQLSSDRALASGTTLPAILELVSRLREKTQVPIVLMGYFNPIFAYGSERFAFDAAQAGVDALLVVDLPPEEAAELKGATDSCGLDLIFLLTPTSDSSRVAMVARQGSGFIYYVSVTGVTGARSAVA 189 The following BLAST results are available for this feature:
BLAST of FC868726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868726 ID=FC868726; Name=FC868726; organism=Citrus clementina; type=EST; length=736bpback to top |