FC868726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_GEOBB (Tryptophan synthase alpha chain OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=trpA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.170e-36 Identity = 73/186 (39.25%), Postives = 115/186 (61.83%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASIS 718 +++ F LK++G+ AL+ ++TAGDPDL+TT + + L+ G+D+IELGVP+SDP+ADGP IQ ++ R+LA GT AIL ++ + + PI L Y+NPI G + F G+ L+V D+P EE L+ ++L+ TPT+ R+ ++ GF+Y S GVTGAR++++ Sbjct: 4 ISDRFASLKERGEKALVTFVTAGDPDLATTEKVVLELERAGADLIELGVPFSDPMADGPTIQLSSDRALASGTTLPAILELVSRLREKTQVPIVLMGYFNPIFAYGSERFAFDAAQAGVDALLVVDLPPEEAAELKGATDSCGLDLIFLLTPTSDGSRIASVARQGSGFIYYVSVTGVTGARSAVA 189
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PSEPF (Tryptophan synthase alpha chain OS=Pseudomonas fluorescens (strain Pf0-1) GN=trpA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.835e-36 Identity = 80/191 (41.88%), Postives = 112/191 (58.64%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQIS-CPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 L F LK+Q + AL+ ++TAGDPD T+ LK L G+D+IELG+P++DP+ADGP IQ A R+L N L M++E S P+ L Y+NPI K GV+ F++ ++ G+ GL+V D+P E L A I+ + TTPTT R+ ++ S GFVY S GVTGA A+ HV+ Sbjct: 4 LQTRFAELKEQNRAALVTFVTAGDPDYDTSLAILKGLPKAGADVIELGMPFTDPMADGPAIQLANIRALGAKQNLTKTLQMVREFREGNSDTPLVLMGYFNPIHKFGVERFIAEAKEAGVDGLIVVDMPPEHNSELCDPAQAAGIDFIRLTTPTTDDARLPKVLNGSSGFVYYVSVAGVTGAGAATLEHVE 194
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PELPD (Tryptophan synthase alpha chain OS=Pelobacter propionicus (strain DSM 2379) GN=trpA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.835e-36 Identity = 77/186 (41.40%), Postives = 108/186 (58.06%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASIS 718 L F LK++ AL+ +ITAGDPDL+TT + LL G+DIIELG+P+SDP+ADGP IQ ++ R+LA T IL+M++ V PI L Y NPI G + F + + G+ G++V D+P EE ES A +++ TPT+ R+ + GFVY + GVTGAR +S Sbjct: 4 LTHCFNELKQRNTKALVTFITAGDPDLATTQAMIPLLQQAGADIIELGMPFSDPMADGPTIQLSSERALAASTTLERILAMVRAVRRSCQVPIVLMGYLNPIHAYGYERFANDAAEAGVDGVLVVDMPPEEAESFLNHANARDLQVAFLLTPTSTDSRIATVGRLGRGFVYYVTVTGVTGARQQVS 189
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_JANSC (Tryptophan synthase alpha chain OS=Jannaschia sp. (strain CCS1) GN=trpA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.835e-36 Identity = 79/182 (43.41%), Postives = 109/182 (59.89%), Query Frame = 2 Query: 167 ETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARA 709 +TF RL GK A + YI AGDPD +T+ E ++ L + G DIIELG+P++DP+ADG IQ A R+L G + L M+++ + PI L YYNPI RGVD F++ R+ GI GL+V D+P EE E L A + + TPTT R+ A++ + GF+Y S G+TGA A Sbjct: 6 DTFARLSASGKKAFVSYIMAGDPDYATSLEVMRGLPAAGVDIIELGLPFTDPMADGSTIQLAGQRALDGGMTLDKTLQMVRDFRAGDDTTPIVLMGYYNPIYSRGVDRFLTDAREAGIDGLIVVDLPPEEDEELCIPAQAAGLNFIRLATPTTDDARLPAVLSNTSGFLYYVSITGITGAAA 187
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_CHLAD (Tryptophan synthase alpha chain OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=trpA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.835e-36 Identity = 71/190 (37.37%), Postives = 118/190 (62.11%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 + ETF RL+ G++AL+PY+T G P+ +T E + L++ G+ + ELG+P+SDPLADG IQ A R+L G ++ + ++ + P+ L YYNP+L+ G++ + + G G ++PD+PLEE L+ A + ++L++F PTTP R+ IV + GF+Y+ S GVTGAR +++ ++ Sbjct: 4 ITETFARLRSSGRIALMPYLTVGFPERESTLELVPALEAAGASLFELGIPFSDPLADGATIQRATQRALENGVTIADCITTVAQLRARNVKAPLLLMGYYNPLLRYGLERACAELAAAGGDGWIIPDLPLEEAAELRPIAAAHHLDLIMFIAPTTPPTRITQIVAHASGFLYIVSLTGVTGARQTLAANL 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PSEPK (Tryptophan synthase alpha chain OS=Pseudomonas putida (strain KT2440) GN=trpA PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.702e-36 Identity = 78/190 (41.05%), Postives = 114/190 (60.00%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 L + F LK +G+ AL+ ++TAGDP + + LK L + G+D+IELG+P++DP+ADG IQ A R+L G L M++E V + PI L YYNPI + GVD F++ ++ G+ GL++ D+P E L A I+ + TTPTT R+ ++E S GFVY S GVTGA ++ + HV Sbjct: 4 LEQRFAELKAEGRSALVTFVTAGDPGYDASLQILKGLPAAGADVIELGMPFTDPMADGVAIQLATLRALEAGQTLVKTLQMVREFRVDNQTTPIVLMGYYNPIHRFGVDTFVTQAKEAGVDGLIIVDLPPEHDAELATPAQAAGIDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHV 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_DESOH (Tryptophan synthase alpha chain OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=trpA PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.702e-36 Identity = 76/189 (40.21%), Postives = 111/189 (58.73%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 + ETF RL + + AL+ ++TAGDP + T+ ++ + G DI+ELGVP+SDP ADGPVIQ ++ R+LA GTN + M + PI LF+YYNPI + G +NF + G G++V D+P EE+ L + L+ PTTP R+ AI ++ GF+YL S GVTG+ + H+ Sbjct: 4 ITETFDRLAAKKEKALVGFVTAGDPAIETSEAIIRAMCEAGIDILELGVPFSDPTADGPVIQRSSQRALANGTNLQTVFDMTATLRKTFQGPIILFSYYNPIFRYGAENFYRDAKQAGADGVLVVDLPPEESAELTSCWKGDDFALIRLLAPTTPDGRIGAIAASASGFLYLVSMTGVTGSSGLDTTHI 192
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PSESM (Tryptophan synthase alpha chain OS=Pseudomonas syringae pv. tomato GN=trpA PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.835e-36 Identity = 78/190 (41.05%), Postives = 115/190 (60.53%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 L + F +LK +G+ L+ +ITAGDP T+ + LK L + G+D+IELG+P++DP+ADG IQ A R+L G L M+ E V + PI L YYNPI + GV+ F++ ++ G+ GL++ D+P E L A + I+ + TTPTT R+ ++E S GFVY S GVTGA ++ + HV Sbjct: 4 LEQRFAQLKTEGRAVLVTFITAGDPGYDTSLKVLKGLPAAGADVIELGMPFTDPMADGVAIQLATLRALDAGQTLLKTLQMVSEFRVDDQTTPIVLMGYYNPIHRFGVEAFVAQAKEAGVDGLIIVDLPPEHDAELATPAQASGIDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHV 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PSEE4 (Tryptophan synthase alpha chain OS=Pseudomonas entomophila (strain L48) GN=trpA PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.835e-36 Identity = 78/190 (41.05%), Postives = 114/190 (60.00%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 L + F LK +G+ AL+ ++TAGDP + E LK L + G+D+IELG+P++DP+ADG IQ A R+L G L M++E V + PI L YYNPI + GV+ F++ ++ G+ GL++ D+P E L A I+ + TTPTT R+ ++E S GFVY S GVTGA ++ + HV Sbjct: 4 LEQRFAELKAEGRSALVTFVTAGDPGYDASLEILKGLPAAGADVIELGMPFTDPMADGVAIQLATLRALEAGQTLAKTLQMVREFRVGNQTTPIVLMGYYNPIHRFGVEQFVAEAKEAGVDGLIIVDLPPEHDAELATPAQAAGIDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHV 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_RHOP2 (Tryptophan synthase alpha chain OS=Rhodopseudomonas palustris (strain HaA2) GN=trpA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.315e-36 Identity = 74/183 (40.44%), Postives = 115/183 (62.84%), Query Frame = 2 Query: 173 FTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASIS 718 F +LK++G+ A + ++ AGDPDL+T+ + LK L + G+DIIE+G+P++DP+ADGP IQAA R+L GT + L ++ + + P+ L YYNPI GVD F++ + G+ GL++ D+P EE L AMK + + TPTT R+ A++ + GFVY S G+TG+ ++ S Sbjct: 9 FAQLKREGRPAFVTFVMAGDPDLATSLQLLKALPTAGADIIEIGMPFTDPMADGPAIQAAGLRALHGGTTLHKTLELVGDFRKDDATTPVVLMGYYNPIYIYGVDAFLADAKAAGVDGLIIVDLPPEEDAELCLPAMKAGLNFIRLATPTTDEKRLPAVLANTSGFVYYVSITGITGSASADS 191 The following BLAST results are available for this feature:
BLAST of FC868726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868726 ID=FC868726; Name=FC868726; organism=Citrus clementina; type=EST; length=736bpback to top |