FC868726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_BACSU (Tryptophan synthase alpha chain OS=Bacillus subtilis GN=trpA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.315e-36 Identity = 80/177 (45.20%), Postives = 113/177 (63.84%), Query Frame = 2 Query: 209 IPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-ISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQLF 736 IP+ITAGDP + E K L G+ +ELGV YSDPLADGPVIQ A+ R+L +G N + + E+ ++ PI LFTYYNP+L+ + F + +R+ I GL+VPD+PLEE+ SLQ+E +++ + PT+ + R+K I+E +EGFVY SS+GVTG R + V F Sbjct: 14 IPFITAGDPVPEVSIELAKSLQKAGATALELGVAYSDPLADGPVIQRASKRALDQGMNIVKAIELGGEMKKNGVNIPIILFTYYNPVLQLNKEYFFALLRENHIDGLLVPDLPLEESNSLQEECKSHEVTYISLVAPTSES-RLKTIIEQAEGFVYCVSSLGVTGVRNEFNSSVYPF 189
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PSEP1 (Tryptophan synthase alpha chain OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=trpA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36 Identity = 78/190 (41.05%), Postives = 113/190 (59.47%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 L + F LK +G+ AL+ ++TAGDP + + LK L + G+D+IELG+P++DP+ADG IQ A R+L G L M++E V + PI L YYNPI + GVD F++ + G+ GL++ D+P E L A I+ + TTPTT R+ ++E S GFVY S GVTGA ++ + HV Sbjct: 4 LEQRFAELKAEGRSALVTFVTAGDPGYDASLQILKGLPAAGADVIELGMPFTDPMADGVAIQLATLRALEAGQTLAKTLQMVREFRVDNQTTPIVLMGYYNPIHRFGVDTFVAEAKAAGVDGLIIVDLPPEHDAELATPAQAAGIDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHV 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_METM6 (Tryptophan synthase alpha chain OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=trpA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36 Identity = 73/172 (42.44%), Postives = 109/172 (63.37%), Query Frame = 2 Query: 197 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARAS 712 K L+ ++ +GDP+ T + +K LD S +IELG+P+SDP+ADGP IQAA R+L+ G +LKE + + P+ L TYYNP+ KRG++NF+ + ++ G GLV+ D+PL+E ++ K+++ V P TP DR+K EAS F+YL S+ G+TGAR S Sbjct: 3 KPVLVSFLVSGDPNPDATLKFMKTLDKY-SGVIELGIPFSDPVADGPTIQAADVRALSNGFKIAKSFEVLKEFRKESNTPVILMTYYNPVYKRGIENFVISAKEAGANGLVIVDLPLQEATEYREICKKHEMGTVFLAAPNTPEDRLKTSDEASTEFLYLISTFGITGARES 173
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_CLOK5 (Tryptophan synthase alpha chain OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=trpA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.077e-35 Identity = 71/186 (38.17%), Postives = 111/186 (59.68%), Query Frame = 2 Query: 173 FTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 F LK QGK ALIP+ITAGDP L TT + +D G+DI+E+G+PYSDPLADGP+IQ ++ R++ G I+ ++++ + P+ YY+ I K G++ F++ +GI G+++PD+P+EE + +K ++ L+ PT+ R++ I GFVY S GVTG I ++ Sbjct: 8 FKELKDQGKKALIPFITAGDPSLDTTVNIVLEMDKKGADIVEIGIPYSDPLADGPIIQGSSQRAIKGGAKIRNIMETVRKIRGKSEIPLVYMVYYSSIFKYGLERFIAEASAVGINGIIIPDLPIEERGDIMDITVKYEVHLIPLVAPTSKR-RIQEIAAGGSGFVYCVSKNGVTGVGEKIKTDIK 192
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_CLOK1 (Tryptophan synthase alpha chain OS=Clostridium kluyveri (strain NBRC 12016) GN=trpA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.077e-35 Identity = 71/186 (38.17%), Postives = 111/186 (59.68%), Query Frame = 2 Query: 173 FTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 F LK QGK ALIP+ITAGDP L TT + +D G+DI+E+G+PYSDPLADGP+IQ ++ R++ G I+ ++++ + P+ YY+ I K G++ F++ +GI G+++PD+P+EE + +K ++ L+ PT+ R++ I GFVY S GVTG I ++ Sbjct: 8 FKELKDQGKKALIPFITAGDPSLDTTVNIVLEMDKKGADIVEIGIPYSDPLADGPIIQGSSQRAIKGGAKIRNIMETVRKIRGKSEIPLVYMVYYSSIFKYGLERFIAEASAVGINGIIIPDLPIEERGDIMDITVKYEVHLIPLVAPTSKR-RIQEIAAGGSGFVYCVSKNGVTGVGEKIKTDIK 192
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_RHOS4 (Tryptophan synthase alpha chain OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=trpA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.407e-35 Identity = 77/188 (40.96%), Postives = 109/188 (57.98%), Query Frame = 2 Query: 167 ETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 +TF RL+ +GK A + YI AGDPDL T+ ++ L G DIIELG+P++DP+ADGP IQ A R+L G L M++ PI + YYNPI RGV+ F++ + GI GL+V D+P EE L A + + TPTT + R+ +++ + GFVY S G+TGA A+ + V Sbjct: 6 DTFRRLRAEGKKAFVAYIMAGDPDLETSLAVMRGLPEAGVDIIELGMPFTDPMADGPTIQTAGQRALEGGQTLTRTLEMVRAFRAENAETPIVMMGYYNPIYARGVETFLAEATEAGIDGLIVVDLPPEEDAELCLPAQAAGLNFIRLATPTTDSRRLPKVLQNTSGFVYYVSITGITGAAAAQAADV 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_RHOS1 (Tryptophan synthase alpha chain OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=trpA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.407e-35 Identity = 77/188 (40.96%), Postives = 109/188 (57.98%), Query Frame = 2 Query: 167 ETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 +TF RL+ +GK A + YI AGDPDL T+ ++ L G DIIELG+P++DP+ADGP IQ A R+L G L M++ PI + YYNPI RGV+ F++ + GI GL+V D+P EE L A + + TPTT + R+ +++ + GFVY S G+TGA A+ + V Sbjct: 6 DTFRRLRAEGKKAFVAYIMAGDPDLETSLAVMRGLPEAGVDIIELGMPFTDPMADGPTIQTAGQRALEGGQTLTRTLEMVRAFRAENAETPIVMMGYYNPIYARGVETFLAEATEAGIDGLIVVDLPPEEDAELCLPAQAAGLNFIRLATPTTDSRRLPKVLQNTSGFVYYVSITGITGAAAAQAADV 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PSEPU (Tryptophan synthase alpha chain OS=Pseudomonas putida GN=trpA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.407e-35 Identity = 77/190 (40.53%), Postives = 113/190 (59.47%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 L + F LK +G+ AL+ ++TAGDP + + LK L + G+D+IELG+P++DP+ADG IQ A R+L G L M++E V + PI L YYNPI + GV+ F++ + G+ GL++ D+P E L A I+ + TTPTT R+ ++E S GFVY S GVTGA ++ + HV Sbjct: 4 LEQRFAELKAEGRSALVTFVTAGDPGYDASLQILKGLPAAGADVIELGMPFTDPMADGVAIQLATLRALEAGQTLAKTLQMVREFRVDNHTTPIVLMGYYNPIHRFGVEKFVAEAKQAGVDGLIIVDLPPEHDAELATPAQAAGIDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHV 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_METB6 (Tryptophan synthase alpha chain OS=Methanoregula boonei (strain 6A8) GN=trpA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.407e-35 Identity = 75/177 (42.37%), Postives = 109/177 (61.58%), Query Frame = 2 Query: 188 KQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASIS 718 K+GK A I + AGDPD T+ K L G+DI+E GVP+SDP+ADGP IQ A R+LA T + I ++++EV PI TYYN I +RG+D F + G+ G++V D+P+EE++ + A K I+ + T TT +RM IV + G++YL S +GVTGAR +++ Sbjct: 11 KKGKSAFIGFTVAGDPDKETSIRIAKALIDGGTDILEFGVPFSDPVADGPTIQRADDRALASCTTPDTIFAIVREVRAYSEVPIVFLTYYNTIYRRGIDRFYLEAHEAGVDGILVADMPVEESDEVAATAEKYGIDPIFLVTQTTSNERMDTIVRHARGYLYLVSVLGVTGARKTVA 187
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_RHOSK (Tryptophan synthase alpha chain OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=trpA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.837e-35 Identity = 76/183 (41.53%), Postives = 107/183 (58.47%), Query Frame = 2 Query: 167 ETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARAS 712 +TF RL+ +GK A + YI AGDPDL T+ ++ L G DIIELG+P++DP+ADGP IQ A R+L G L M++ PI + YYNPI RGV+ F++ + GI GL+V D+P EE L A + + TPTT + R+ +++ + GFVY S G+TGA A+ Sbjct: 6 DTFRRLRAEGKKAFVAYIMAGDPDLETSLAVMRGLPEAGVDIIELGMPFTDPMADGPTIQTAGQRALEGGQTLTRTLEMVRAFRAENAETPIVMMGYYNPIYARGVETFLAEATEAGIDGLIVVDLPPEEDAELCLPAQAAGLNFIRLATPTTDSRRLPKVLQNTSGFVYYVSITGITGAAAA 188 The following BLAST results are available for this feature:
BLAST of FC868726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868726 ID=FC868726; Name=FC868726; organism=Citrus clementina; type=EST; length=736bpback to top |