FC868726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_CLOAB (Tryptophan synthase alpha chain OS=Clostridium acetobutylicum GN=trpA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.837e-35 Identity = 71/188 (37.77%), Postives = 121/188 (64.36%), Query Frame = 2 Query: 173 FTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQLF 736 F LK + K A+IP++T+G PD+ TT + + ++ G+D+IELG+PYSDP+ADGP+IQ +++ +L G I++M+KEV + PI Y+ + K G++ F+ ++ G+ G+V+PD+PLEE E +++ A + + ++ PT+ DR+ IV ++GF+Y S+ GVTG R I+ V+ + Sbjct: 9 FKELKYKNKKAMIPFVTSGYPDVETTKKIVIEMEKSGADLIELGIPYSDPVADGPIIQISSSGALNNGLKIKDIMNMVKEVRKNVKIPIVYMGYFGCVFKYGLEKFIKDSKESGVDGIVIPDLPLEERERVKEIADRYEFYIIPLVAPTS-EDRIGKIVNGAKGFIYCVSTNGVTGVRNIIANDVKAY 195
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_BACNA (Tryptophan synthase alpha chain OS=Bacillus subtilis subsp. natto GN=trpA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.837e-35 Identity = 79/177 (44.63%), Postives = 113/177 (63.84%), Query Frame = 2 Query: 209 IPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-ISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQLF 736 IP+ITAGDP + E K L G+ +ELGV YSDPLADGPVIQ A+ R+L +G N + + E+ ++ PI LFTYYNP+L+ + F + +++ I GL+VPD+PLEE+ SLQ+E +++ + PT+ + R+K I+E +EGFVY SS+GVTG R + V F Sbjct: 14 IPFITAGDPVPEVSIELAKSLQKAGATALELGVAYSDPLADGPVIQRASKRALDQGMNIVKAIELGGEMKKNGVNIPIILFTYYNPVLQLNKEYFFALLQENHIDGLLVPDLPLEESNSLQEECKSHEVTYISLVAPTSES-RLKTIIEQAEGFVYCVSSLGVTGVRNEFNSSVYPF 189
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_AZOVD (Tryptophan synthase alpha chain OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=trpA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.134e-35 Identity = 78/191 (40.84%), Postives = 111/191 (58.12%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVP-QISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 L F LK+ + AL+ ++TAGDPD T+ LK L G+D+IELG+P++DP+ADGP IQ A R+L G N L M++ + P+ L Y+NPI GV+ F++ R+ G+ GL+V D+P E E L A ++ + TTPTT R+ ++ S GFVY S GVTGA A+ HV+ Sbjct: 4 LQTRFAELKQADRAALVTFVTAGDPDYETSLAILKGLPEAGADVIELGMPFTDPMADGPAIQLANIRALGAGQNLVKTLRMVRAFREGDRTTPLVLMGYFNPIHYYGVERFIAEAREAGVDGLIVVDLPPEHNEDLCDPAQAAGLDFIRLTTPTTDDKRLPRVLAGSSGFVYYVSVAGVTGAHAASLEHVE 194
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PSEPG (Tryptophan synthase alpha chain OS=Pseudomonas putida (strain GB-1) GN=trpA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35 Identity = 77/190 (40.53%), Postives = 113/190 (59.47%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 L + F LK +G+ AL+ ++TAGDP + + LK L + G+D+IELG+P++DP+ADG IQ A R+L G L M++E V + PI L YYNPI + GV+ F++ + G+ GL++ D+P E L A I+ + TTPTT R+ ++E S GFVY S GVTGA ++ + HV Sbjct: 4 LEQRFAELKAEGRSALVTFVTAGDPGYDASLQILKGLPAAGADVIELGMPFTDPMADGVAIQLATLRALEAGQTLAKTLQMVREFRVDNQTTPIVLMGYYNPIHRFGVEPFVAEAKAAGVDGLIIVDLPPEHDAELATPAQAAGIDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHV 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_BRAJA (Tryptophan synthase alpha chain OS=Bradyrhizobium japonicum GN=trpA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35 Identity = 76/186 (40.86%), Postives = 110/186 (59.14%), Query Frame = 2 Query: 173 FTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISC-PIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 F L KQG+ A + ++ AGDPD +T+ E +K L G+D+IE+G+P++DP+ADGP IQAA R+L G L +++ + PI L YYNPI GVD F+ + G+ GL++ D+P EE + L AMK + + TPTT R+ A++ + GFVY S G+TGA A+ S V Sbjct: 9 FAELAKQGRSAFVTFLMAGDPDPATSLEIIKALPKSGADVIEIGMPFTDPMADGPSIQAAGLRALKAGMTLKKTLELVRGFRKDDNATPIVLMGYYNPIYIYGVDKFLVDAKSAGVDGLIIVDLPPEEDDELCLPAMKAGLNFIRLATPTTDDKRLPAVLANTSGFVYYVSITGITGAAAADSSAV 194
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_NITWN (Tryptophan synthase alpha chain OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=trpA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.346e-35 Identity = 76/190 (40.00%), Postives = 110/190 (57.89%), Query Frame = 2 Query: 152 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASIS 718 T + F L+KQG+ A + ++ AGDPD +T+ +K L G+DIIE+G+P++DP+ADGP +QAA R+L G L M+ E S P+ L YYNP+ GV+ F+ R G+ GL+V D+P EE L AMK + + TPTT R+ A++ + GFVY S G+TG+ A+ S Sbjct: 2 TTRIDTRFAELRKQGRSAFVTFLMAGDPDPATSLAIIKALPRAGADIIEIGMPFTDPMADGPAVQAAGRRALDAGMTLTGTLRMIGEFRKDDDSTPVVLMGYYNPVYIYGVEKFLDDARAAGVDGLIVVDLPPEEDSELCIPAMKAGLNFIRLATPTTDDKRLPAVLANTSGFVYYVSITGITGSAAADS 191
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_METM5 (Tryptophan synthase alpha chain OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=trpA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.346e-35 Identity = 70/170 (41.18%), Postives = 108/170 (63.53%), Query Frame = 2 Query: 197 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGAR 706 K L+ ++ +GDP+ T + +K LD S +IELG+P+SDP+ADGP IQAA R+L+ G +LKE + P+ L TYYNP+ KRG++NF+ + ++ G +GL++ D+PL+E ++ K+++ V P TP +R+K EAS F+YL S+ G+TGAR Sbjct: 3 KPVLVSFLVSGDPNPDATLKFMKTLDKY-SGVIELGIPFSDPVADGPTIQAADVRALSNGFKIAKSFEVLKEFRKESDTPVILMTYYNPVFKRGIENFVISAKEAGAKGLIIVDLPLQEATEYREICKKHEMGTVFLAAPNTPEERLKISDEASTEFLYLISTFGITGAR 171
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_RHOP5 (Tryptophan synthase alpha chain OS=Rhodopseudomonas palustris (strain BisA53) GN=trpA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.982e-35 Identity = 75/188 (39.89%), Postives = 111/188 (59.04%), Query Frame = 2 Query: 152 TVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARAS 712 T L F LKKQG+ A + ++ AGDPDL T+ + L+ L G+DIIE+G+P++DP+ADGP IQAA R+L GT L +++ + P+ L YYNPI GV+ F+ + G+ GL++ D+P EE L A+K + + TPTT R+ A++ + GFVY S G+TGA ++ Sbjct: 2 TTRLDSRFADLKKQGRAAFVTFLMAGDPDLDTSLKLLQALPKAGADIIEIGMPFTDPMADGPAIQAAGLRALKAGTTLQKTLELVRAFRKADDATPLVLMGYYNPIYIYGVEPFLIDAKAAGVDGLIIVDLPPEEDAELCLPAIKAGLNFIRLATPTTDDKRLPAVLANTSGFVYYVSVTGITGAASA 189
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_BACHD (Tryptophan synthase alpha chain OS=Bacillus halodurans GN=trpA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.982e-35 Identity = 76/181 (41.99%), Postives = 111/181 (61.33%), Query Frame = 2 Query: 197 KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQ-ISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQLF 736 K IP+ITAGDP+ T E L+ G+DI+ELG+PYSDPLADGPVIQAA+ R+L LS++ ++ Q ++ P+ +FTY NP+L+ G + F+ D + G++VPD+P EE E LQ ++ + L+ PT+ R++ I ++GFVY SS+GVTG R + V F Sbjct: 12 KNLFIPFITAGDPNPEVTIELALTLEEAGADILELGIPYSDPLADGPVIQAASKRALKHEMTLEKALSLVPKMRAQGLTIPVIVFTYVNPLLQYGEEQFVKRAADYQVDGILVPDMPFEEGEVLQAACQEHNLSLISLVAPTS-NKRIEKIAARAQGFVYCVSSLGVTGLRDELDPRVHEF 191
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_PSEFS (Tryptophan synthase alpha chain OS=Pseudomonas fluorescens (strain SBW25) GN=trpA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.191e-34 Identity = 78/191 (40.84%), Postives = 111/191 (58.12%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEV-VPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 L F +LK+Q + AL+ ++TAGDP T+ LK L + G+D+IELG+P++DP+ADGP IQ A R+L N L M++E P+ L Y+NPI K GV F++ ++ G+ GL+V D+P E L A I+ + TTPTT R+ ++ S GFVY S GVTGA A+ HV+ Sbjct: 4 LQTRFAQLKEQNRAALVTFVTAGDPGYDTSLAILKGLPAAGADVIELGMPFTDPMADGPAIQLANIRALEAKQNLVKTLQMVREFRKDNNDTPLVLMGYFNPIHKYGVPKFIADAKEAGVDGLIVVDMPPEHNGELCDPAQAAGIDFIRLTTPTTDDVRLPTVLNGSSGFVYYVSVAGVTGAGAATLEHVE 194 The following BLAST results are available for this feature:
BLAST of FC868726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868726 ID=FC868726; Name=FC868726; organism=Citrus clementina; type=EST; length=736bpback to top |