FC868728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: PROSC_HUMAN (Proline synthetase co-transcribed bacterial homolog protein OS=Homo sapiens GN=PROSC PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.411e-49 Identity = 111/223 (49.78%), Postives = 150/223 (67.26%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ-----LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-NFXTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGST 752 LR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+ K+A ++N + G + LKV+VQ+NTSGEESK G+ PS + +V+H++ CPNLEF GLMTIG D + P +F L R E+CK L IP +Q +LSMGMS DF+ A+E+GST Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQRKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCKKLNIPADQVELSMGMSADFQHAVEVGST 238
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: PROSC_PONAB (Proline synthetase co-transcribed bacterial homolog protein OS=Pongo abelii GN=PROSC PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.360e-49 Identity = 111/223 (49.78%), Postives = 150/223 (67.26%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ-----LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-NFXTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGST 752 LR+V +RV QA R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL ++E+VD+ K+AG++N + G + LKV+VQ+NTSGEESK G+ PS + +V+H++ CPNLEF GLMTIG D + P +F L R E+CK L IP +Q +LSMGMS DF+ AIE+GST Sbjct: 17 LRAVNERVQQAVALRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLGPEIKWHFIGHLQKQNVNKLMA-VPNLFVLETVDSVKLAGKVNSSWQKKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCKKLNIPADQVELSMGMSVDFQHAIEVGST 238
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: PROSC_MOUSE (Proline synthetase co-transcribed bacterial homolog protein OS=Mus musculus GN=Prosc PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 9.144e-49 Identity = 110/223 (49.33%), Postives = 152/223 (68.16%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG-RKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-NFXTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGST 752 LR+V +RV Q+ R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL+M+E+VD+ K+A ++N + G +PLKV+VQ+NTSGE+SK G+ PS + +V+H+ +CP+LEF GLMTIG D + P +F L R E+C+ LGIP EQ +LSMGMS DF+ AIE+GST Sbjct: 17 LRAVNERVQQSVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKGPTEPLKVMVQINTSGEDSKHGLLPSETIAVVEHIKASCPSLEFVGLMTIGSFGHDLSQGPNPDFQRLLTLRRELCEKLGIPVEQVELSMGMSMDFQHAIEVGST 238
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: PROSC_BOVIN (Proline synthetase co-transcribed bacterial homolog protein OS=Bos taurus GN=PROSC PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 7.740e-48 Identity = 109/223 (48.88%), Postives = 148/223 (66.37%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-NFXTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGST 752 LR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL+M+E+VD+ K+A ++N + G + LKV+VQ+NTSGE SK G+ P+ LV+H++ CP+LEF GLMTIG D + P +F L R E+C+ LG P EQ +LSMGMS DF+ AIE+GST Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQRTFGENYVQELLEKASNPQILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSAWQKKGSPERLKVMVQINTSGEASKHGLPPAEMAALVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLLSLREELCRKLGAPPEQVELSMGMSVDFQHAIEVGST 238
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: PROSC_DICDI (Proline synthetase co-transcribed bacterial homolog protein OS=Dictyostelium discoideum GN=prosc PE=3 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 6.553e-47 Identity = 108/229 (47.16%), Postives = 145/229 (63.32%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDR--IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL----------NRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQ--NCPN-LEFCGLMTIGMPDYTSTPENFXTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGST 752 L S + + E S DR +++VAVSKTKP +IR +Y+ GHR FGENY+QE+V K+ +L + +++WHFIG++QSNK K +L V NL +VE+V+N+KI +L N K L +++QVNTSGEESKSG +P CL+LVKH + NC N L F GLMTIG P+ T +F L C++ + K L IP + +LSMGMS DFE AIE GST Sbjct: 10 LISSYKNIKDRVEIISNKFDRHNVKLVAVSKTKPTEMIRILYDKGHRHFGENYIQELVSKSEELSELNEIKWHFIGSIQSNKSK-ILTSVKNLYVVETVENKKILDKLAKSLLNNEENNNNNNNNNNKKLNIMIQVNTSGEESKSGCKPEECLDLVKHCLEDNNCKNSLNFLGLMTIGNPNATPDQPDFKCLVDCKNNISKQLNIPLDSIELSMGMSHDFEPAIEFGST 237
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: Y112_PASMU (UPF0001 protein PM0112 OS=Pasteurella multocida GN=PM0112 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.369e-36 Identity = 98/218 (44.95%), Postives = 130/218 (59.63%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA---AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMP-DYTSTPENFXTLAKCRSEVCKALGIPEEQCD-LSMGMSGDFELAIEMGSTM 755 L + Q + A +++ RP ++++AVSKTKPV I Q Y+AG FGENYVQE VEK AQ LEWHFIG LQSNK K + + ++++D +KIA RLN +KPL VL+Q+N S E+SKSG++P+ L+L K + QN P+L GLM I P D +T E T E K +P+ Q D LSMGM+ D AI+ GSTM Sbjct: 7 LAQIQQNIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQYFAQKNIPLEWHFIGPLQSNKTKLV---AEHFDWMQTLDRKKIADRLNEQ-RPHYKKPLNVLIQINISDEDSKSGIQPNEMLDLAKQI-QNLPHLCLRGLMAIPAPTDDLATQEQAFTQMHSLFEQLKQ-ALPDAQIDTLSMGMTDDMASAIQCGSTM 218
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: YKC9_SCHPO (UPF0001 protein C644.09 OS=Schizosaccharomyces pombe GN=SPAC644.09 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.985e-36 Identity = 91/193 (47.15%), Postives = 120/193 (62.18%), Query Frame = 3 Query: 180 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPE---NFXTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGS 749 + +VAVSK PV + + Y AG R FGENY+QE ++K +PDD++WHFIG+LQS+K K +A V NL +E++D EK A +N E + + PL V +QVNTSGEE+K GV PS LEL K V Q+ L GLMTIG + + +F L+ R + LGIP LSMGMS D+ LAI+ GS Sbjct: 24 VLLVAVSKFHPVETLMEAYNAGQRHFGENYMQEFLKKVELMPDDVQWHFIGSLQSSKCKK-IASVKNLYSIETIDTEKKARLVNSAREAL-QLPLNVYIQVNTSGEENKGGVTPSKVLELCKQV-QDMKYLRLKGLMTIGSISNSQLSDHNPDFQVLSDLRESLQNELGIP---LQLSMGMSSDYLLAIKYGS 210
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: Y090_HAEIN (UPF0001 protein HI0090 OS=Haemophilus influenzae GN=HI0090 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.674e-34 Identity = 93/219 (42.47%), Postives = 130/219 (59.36%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMP-DYTSTPEN-FXTLAKCRSEVCKALGIPEEQCD-LSMGMSGDFELAIEMGSTM 755 L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK +LEWHFIG LQSNK + + + ++++D KIA RLN T + PL VL+Q+N S EESKSG++P L L KH+ +N P+L GLM I P D + EN F + + ++ + L P +Q D LSMGM+ D AI+ GSTM Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQYFESQGINLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRPT-NKAPLNVLIQINISDEESKSGIQPEEMLTLAKHI-ENLPHLCLRGLMAIPAPTDNIAEQENAFRKMLELFEQLKQVL--PNQQIDTLSMGMTDDMPSAIKCGSTM 218
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: Y461_VIBCH (UPF0001 protein VC_0461 OS=Vibrio cholerae GN=VC_0461 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 92/221 (41.63%), Postives = 129/221 (58.37%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTI--GMPDYTSTPENFXTLAKCRSEVCKALGIPEEQCD-LSMGMSGDFELAIEMGSTM 755 + + ++ A ++ R ++++AVSKTKPV I + +AG R FGENYVQE V+K + LEWHFIG LQSNK + + + V ++D EKIA RL+ + PL+VL+QVNTSGE SKSG+EP L + +S+ PNL GLM+I +PDY + F LA+ + ++ + Q D LSMGMSGD + AIE GST+ Sbjct: 8 IEHITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLSEQ-RPVNMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELISR-LPNLTLRGLMSIPENVPDYPAQLAAFTQLAELQQQLAQKY----PQIDTLSMGMSGDMQAAIEAGSTI 219
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: YPI1_VIBAL (UPF0001 protein in pilT-proC intergenic region OS=Vibrio alginolyticus PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.085e-33 Identity = 95/220 (43.18%), Postives = 126/220 (57.27%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----AAQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTI--GMPDYTSTPENFXTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTM 755 + + ++ ++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K A PD+ +EWHFIG +QSNK + + + V ++D KIA RLN KPL+VL+QVNTSGE SKSGV + EL + +S+ PNL GLM+I + DY S F LA + + PE LSMGMSGD AIE GSTM Sbjct: 8 IEHITSQIRYDEQKCGRTPESVQLLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFAEHYPDNRIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRTKIAQRLNDQ-RPSELKPLQVLIQVNTSGEASKSGVTEAEVFELAELISR-LPNLTLRGLMSIPANVSDYESQLHEFQKLATLKQTL--EAQFPEID-TLSMGMSGDMTAAIEAGSTM 219 The following BLAST results are available for this feature:
BLAST of FC868728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868728 ID=FC868728; Name=FC868728; organism=Citrus clementina; type=EST; length=767bpback to top |