FC868728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: PROSC_CAEEL (Proline synthetase co-transcribed bacterial homolog protein OS=Caenorhabditis elegans GN=F09E5.8 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.046e-32 Identity = 92/220 (41.82%), Postives = 125/220 (56.82%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK--PLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYT-STPEN--FXTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGST 752 L ++I+ V A +S+ R R+VAVSKTK +I Y R FGENYVQE+ EK+ L D+ WHFIG +QSNK+ + P L VE+V+ EK A ++ G PL+VLVQVNTSGE++K G+E +L + + + C NL+F G MTIG D + ++ EN F L K R + G + +LSMGMS DF AI G+T Sbjct: 10 LFNIIEAVADAVT-ASQATKRCRLVAVSKTKSADLIEACYSQNQRHFGENYVQELEEKSDVLASKCLDIRWHFIGQVQSNKIGKI-CNSPGLWCVETVETEKHARIFDKEWSKHGANLSPLRVLVQVNTSGEDNKGGIEIGEAPKLAEFIRKECQNLKFDGFMTIGSFDNSHASGENPDFEKLFKVRQTWAEQTGESADSVELSMGMSDDFLQAIHQGAT 227
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: Y274_AQUAE (UPF0001 protein aq_274 OS=Aquifex aeolicus GN=aq_274 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.673e-32 Identity = 87/218 (39.91%), Postives = 126/218 (57.80%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPEN----FXTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTM 755 L V++R+ +A ER+ R + +++ SKT P VIR+ Y G + +GEN VQE ++K L D DLEWHFIG LQ+NKVK L+ V ++ S+D + +A + + VL++VN GEE+K GVEP EL ++ + PN++ GLMTI P Y PE+ F L + R E+ + + LSMGMS DFE+AIE G+T+ Sbjct: 7 LSRVLERIQKACERAGRGENCAKLLGASKTVPPEVIREFYNCGLKVYGENRVQEFLKKYEALKDLDLEWHFIGRLQTNKVKYLMGKV---VLIHSLDRKNLADEIQKRA-FKNNIVQDVLIEVNVGGEETKGGVEPENLKELFEYTLE-LPNVKVLGLMTI--PPYLENPEDVRPYFRKLRELRDELQREYNVALPH--LSMGMSHDFEVAIEEGATI 215
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: Y394_PSEAE (UPF0001 protein PA0394 OS=Pseudomonas aeruginosa GN=PA0394 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.598e-31 Identity = 90/214 (42.06%), Postives = 118/214 (55.14%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPENFXTLAKCRSEVCKA-LGIPEEQCDLSMGMSGDFELAIEMGST 752 + V R+ +AA+ + R P + ++AVSKTKP + +R+ + AG R FGENY+QE + K A+L D L WHFIG +QSNK +P+ + V SVD KIA RL+ G PL V +QVN SGE SKSG P L + V Q PNL GLM I P ++ A+ R + LG+ LSMGMS D E AI G+T Sbjct: 8 IAKVAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELADLPLNWHFIGPIQSNKTRPI---AEHFQWVHSVDRLKIAQRLSEQ-RPAGLPPLNVCLQVNVSGEASKSGCAPEDLPALAEAVKQ-LPNLRLRGLMAIPEPTAERAAQH-AAFARLRELLLDLNLGLD----TLSMGMSDDLEAAIGEGAT 211
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: YBD6_YEAST (UPF0001 protein YBL036C OS=Saccharomyces cerevisiae GN=YBL036C PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.506e-30 Identity = 86/199 (43.22%), Postives = 119/199 (59.80%), Query Frame = 3 Query: 177 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEESKSGV-EPSGCLELVK-HVSQNCPNLEFCGLMTIGM--PDYTSTPEN--FXTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGS 749 +I ++ VSK KP S I+ +Y+ G R FGENYVQE++EKA LPDD++WHFIG LQ+NK K LA VPNL VE++D+ K A +LN R P+ VQ+NTS E+ KSG+ + E++ +S+ C ++ GLMTIG + + EN F TL + + ++ G LSMGMS DF AI G+ Sbjct: 41 KILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCKD-LAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHEDQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNVSHEDSKENRDFATLVEWKKKIDAKFG---TSLKLSMGMSADFREAIRQGT 235
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: Y395_HELPY (UPF0001 protein HP_0395 OS=Helicobacter pylori GN=HP_0395 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.416e-27 Identity = 82/214 (38.32%), Postives = 118/214 (55.14%), Query Frame = 3 Query: 123 SVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIG--MPDYTSTPENFXTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTM 755 ++I ++ +A SR ++IVAVSK I+ Y R FGEN VQ++ K L LEWH IG+LQ NK+ LL+ P A++ S+D+ K+A ++ + E +G L L+QVN++ EESKSGV P LE+ +S+ C +L+ GLM IG D ++F T K ++ A LSMGMS DFELAI G+ + Sbjct: 10 ALITKIEKARTAYSRH-HIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKINALLSLKP--ALLHSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNA-------SVLSMGMSDDFELAIACGANL 212
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: Y395_HELPJ (UPF0001 protein jhp_0986 OS=Helicobacter pylori J99 GN=jhp_0986 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.767e-27 Identity = 79/195 (40.51%), Postives = 108/195 (55.38%), Query Frame = 3 Query: 180 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIG--MPDYTSTPENFXTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTM 755 ++IVAVSK I+ Y R FGEN VQ++ K L LEWH IG+LQ NK+ LL+ P A++ S+D+ K+A ++ + E +G L L+QVN++ EESKSGV P LE +S+ C L+ GLM IG D T ++F T K ++ A LSMGMS DFELAI G+ + Sbjct: 28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKIKMHSLEHLPLEWHMIGSLQENKINALLSLKP--ALLHSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALETYSQISETCKRLKLKGLMCIGAHTDDETKIEKSFTTTKKLFDQIKNA-------SVLSMGMSDDFELAIACGANL 212
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: YGGS_ECOLI (UPF0001 protein yggS OS=Escherichia coli (strain K12) GN=yggS PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.837e-27 Identity = 87/218 (39.91%), Postives = 114/218 (52.29%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPENFXTLAKCRSEVCKALGIPEEQCD-LSMGMSGDFELAIEMGSTM 755 L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K + LEWHFIG LQSNK + + + ++D +IA RLN PL VL+Q+N S E SKSG++ + EL V++ P L GLM I P+ S +A+ + L D LS+GMS D E AI GSTM Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAE-LPRLRLRGLMAIPAPE--SEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTM 218
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: YGGS_ECOL6 (UPF0001 protein yggS OS=Escherichia coli O6 GN=yggS PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.837e-27 Identity = 87/218 (39.91%), Postives = 114/218 (52.29%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPENFXTLAKCRSEVCKALGIPEEQCD-LSMGMSGDFELAIEMGSTM 755 L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K + LEWHFIG LQSNK + + + ++D +IA RLN PL VL+Q+N S E SKSG++ + EL V++ P L GLM I P+ S +A+ + L D LS+GMS D E AI GSTM Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAE-LPRLRLRGLMAIPAPE--SEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTM 218
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: YGGS_ECO57 (UPF0001 protein yggS OS=Escherichia coli O157:H7 GN=yggS PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.837e-27 Identity = 87/218 (39.91%), Postives = 114/218 (52.29%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPENFXTLAKCRSEVCKALGIPEEQCD-LSMGMSGDFELAIEMGSTM 755 L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K + LEWHFIG LQSNK + + + ++D +IA RLN PL VL+Q+N S E SKSG++ + EL V++ P L GLM I P+ S +A+ + L D LS+GMS D E AI GSTM Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAE-LPRLRLRGLMAIPAPE--SEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTM 218
BLAST of FC868728 vs. ExPASy Swiss-Prot
Match: YLME_BACSU (UPF0001 protein ylmE OS=Bacillus subtilis GN=ylmE PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 73/215 (33.95%), Postives = 116/215 (53.95%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIG--MPDYTSTPENFXTLAKCRSEVCKALGIPEEQC-DLSMGMSGDFELAIEMGST 752 LR + +R+++A RS R D + ++AV+K ++ +AG C GEN E++ K + + EWHFIG+LQS K K + V +++ + S+D +A + +E ++ VQVNTS E SK G++ + ++ +S ++ GLMT+ D F +L + R +V K L P C +LSMGMS DFE+AIE G+T Sbjct: 7 LRHINERINEACNRSGRSSDEVTVIAVTKYVSPERAQEAVDAGITCLGENRDAELLRKQELMKGNPEWHFIGSLQSRKAKSV---VNSVSYIHSLDRLSLA----KEIEKRAEGTVRCFVQVNTSLEPSKHGMKKEEVIPFIQELS-GFEHILVAGLMTMAPLTDDQDQIRSCFRSLRELRDQVQK-LNQPNAPCTELSMGMSNDFEIAIEEGAT 212 The following BLAST results are available for this feature:
BLAST of FC868728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868728 ID=FC868728; Name=FC868728; organism=Citrus clementina; type=EST; length=767bpback to top |