FC868730

Overview
NameFC868730
Unique NameFC868730
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: AK1CN_HORSE (Aldo-keto reductase family 1 member C23 OS=Equus caballus GN=AKR1C23 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.913e-38
Identity = 93/206 (45.15%), Postives = 127/206 (61.65%), Query Frame = 2
Query:   71 GKTIPLVGFGTA---QFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPG-TGFPYNKED---IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            G  I  +GFGT    + P   A EA K     AI+ G+RH D A +Y +E+ +G AI   ++ G +K R+++F TSKLW      QLV PAL+ SLKNL L+Y+DLY+IHFPV++KPG    P +++     + +D    WEAME+C++ GLTKSIGVSNF  ++LE +L     K  P  NQVE +P   Q KL DFC+ K  +L
Sbjct:   13 GHFIHALGFGTYAPNEVPKSKAVEATKS----AIDAGFRHIDCAHLYDNEKEVGLAIRSKIQDGTVK-REDIFCTSKLWATSLRLQLVRPALEKSLKNLQLDYVDLYIIHFPVAVKPGEEHLPQDEQGRMIFDTVDLCATWEAMEKCKDAGLTKSIGVSNFNRRQLEMILNKPGLKHKPVCNQVECHPYLNQSKLLDFCKSKDIVL 213          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: PE2R_RABIT (Prostaglandin-E(2) 9-reductase OS=Oryctolagus cuniculus GN=AKR1C5 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.969e-38
Identity = 91/208 (43.75%), Postives = 126/208 (60.58%), Query Frame = 2
Query:   65 STGKTIPLVGFGT---AQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGTGF----PYNKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            S G  IP++GFGT    + P   A EA K     AI+ G+RH D+A  Y++E+ +G AI   +  G +K R+++F TSKLW      +LV P+L+ SLKNL L+Y+DLY+IHFP +LKPG        + K   + +D    WEAME+C++ GL KSIGVSNF  ++LE +L     K  P  NQVE +P   Q KL +FC+ K  +L
Sbjct:   11 SDGHFIPVLGFGTYAPEEVPKSKAMEATKI----AIDAGFRHIDSAYFYKNEKEVGLAIRSKIADGTVK-REDIFYTSKLWCTFHRPELVRPSLEDSLKNLQLDYVDLYIIHFPTALKPGVEIIPTDEHGKAIFDTVDICATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQGKLLEFCKSKGIVL 213          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: DIDH_RAT (3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus GN=Akr1c9 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.489e-38
Identity = 88/203 (43.35%), Postives = 127/203 (62.56%), Query Frame = 2
Query:   71 GKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGTGF----PYNKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            G  IP++GFGT      A  E +K + + AI+ G+RHFD+A +Y+ EE +G+AI   +  G +K R+++F TSKLW      +LV   L+ +LK+  L+Y+DLY+IHFP++L+PG  F     + K   E +D    WEAME+C++ GL KSIGVSNF C++LER+L     K  P  NQVE +    Q K+ D+C+ K  IL
Sbjct:   13 GNFIPVLGFGTTVPEKVAKDEVIKATKI-AIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTVK-REDIFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQSKMLDYCKSKDIIL 213          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: AK1C3_PONAB (Aldo-keto reductase family 1 member C3 homolog OS=Pongo abelii GN=AKR1C3 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.466e-37
Identity = 91/210 (43.33%), Postives = 127/210 (60.48%), Query Frame = 2
Query:   71 GKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGTGFPYNKEDIEPLDYEG-----------VWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            G  +P++GFGT   P    ++A++ + + AIE G+RH D+A +Y +EE +G AI   +  G +K R+++F TSKLW      +LV PAL+ SLK   L+Y+DLYLIH P+SLKPG       E++ P D  G            WEAMEEC++ GL KSIGVSNF  ++LE +L     K  P  NQVE +P + + KL DFC+ K  +L
Sbjct:   13 GHFMPVLGFGTYAPPEVPRSKALEVTKL-AIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVK-REDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPG-------EELSPTDENGKVIFDIVDLCTTWEAMEECKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVL 213          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: ALDR_PIG (Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 7.175e-37
Identity = 88/204 (43.14%), Postives = 130/204 (63.73%), Query Frame = 2
Query:   68 TGKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGTG-FPYNKE-DIEP--LDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            TG  +P++G GT + P G  TEAVK     AI++GYRH D A +YQ+E  +G  + + L+ G +  R++LFI SKLW     + LV  A QT+L++L L+Y+DLYLIH+P   KPG   FP + + ++ P   D+   WEAMEE  + GL K+IGVSNF   ++E++L     K  PAVNQ+E++P   Q+KL ++C+ K  ++
Sbjct:    9 TGAKMPILGLGTWKSPPGKVTEAVKV----AIDLGYRHIDCAHVYQNENEVGLGLQEKLQ-GQVVKREDLFIVSKLWCTDHEKNLVKGACQTTLRDLKLDYLDLYLIHWPTGFKPGKDPFPLDGDGNVVPDESDFVETWEAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVNQIEVHPYLTQEKLIEYCKSKGIVV 207          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: AK1C3_HUMAN (Aldo-keto reductase family 1 member C3 OS=Homo sapiens GN=AKR1C3 PE=1 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 7.175e-37
Identity = 90/210 (42.86%), Postives = 127/210 (60.48%), Query Frame = 2
Query:   71 GKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGTGFPYNKEDIEPLDYEG-----------VWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            G  +P++GFGT   P    ++A++ + + AIE G+RH D+A +Y +EE +G AI   +  G +K R+++F TSKLW      +LV PAL+ SLK   L+Y+DLYLIH P+SLKPG       E++ P D  G            WEAME+C++ GL KSIGVSNF  ++LE +L     K  P  NQVE +P + + KL DFC+ K  +L
Sbjct:   13 GHFMPVLGFGTYAPPEVPRSKALEVTKL-AIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVK-REDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPG-------EELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVL 213          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: AKC1H_RAT (Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus GN=Akr1c18 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.370e-37
Identity = 87/203 (42.86%), Postives = 125/203 (61.58%), Query Frame = 2
Query:   71 GKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGTGFPYNKED----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            G +IP++GFGT         +++ ES   AI+VG+RH D + +YQ+EE +G+AI   +  G +K R+++F TSKLW      +LV P+L+ SL+ L L+Y+DLYLIHFPVSLKPG       E     ++ +D    WEAME+C++ GL KSIGVSNF  ++LE++L     K  P  NQVE +    Q KL  +C+    +L
Sbjct:   13 GHSIPVLGFGTYATEENLRKKSM-ESTKIAIDVGFRHIDCSHLYQNEEEIGQAIVSKIEDGTVK-REDIFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVDLYLIHFPVSLKPGDELLPQDEHGNLILDTVDLCDTWEAMEKCKDAGLAKSIGVSNFNRRQLEKILNKPGLKHRPVCNQVECHLYLNQSKLLAYCKMNDIVL 213          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: ALRA_DICDI (Aldose reductase A OS=Dictyostelium discoideum GN=alrA PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36
Identity = 86/201 (42.79%), Postives = 122/201 (60.70%), Query Frame = 2
Query:   65 STGKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGTGFPYNKEDI-------EPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLLATAKIPPAVNQVELNPVWQQKKLRDFCEK 646
            S+G  IPLVGFGT    + A T  V ++V  A++ GYRH D AA+Y +E+ +GEA  +         R+++FITSKLW     ++ V PAL+ +L +LGL+Y+DLYL+H+PV+      F Y   DI       E +     WE ME+  + GL KSIG+SNF  + L  +L+ A+I PA NQVEL+P   Q +L+ FC+K
Sbjct:    8 SSGHKIPLVGFGT----WKAETTLVGKAVEVALDAGYRHIDCAAVYLNEKEVGEAFTKKFTTEATVKREDVFITSKLWNTFHKKEHVRPALERTLSDLGLQYLDLYLVHWPVA------FEYTSNDIQTSGSTQEFVSIRETWEEMEKLVDAGLVKSIGLSNFNVQGLMEVLSYARIKPAANQVELHPFLSQPELKKFCDK 198          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: AKC1H_MOUSE (Aldo-keto reductase family 1 member C18 OS=Mus musculus GN=Akr1c18 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.353e-35
Identity = 89/207 (43.00%), Postives = 123/207 (59.42%), Query Frame = 2
Query:   71 GKTIPLVGFGTAQFPFGAATEAVK----ESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGTGFPYNKED----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            G +IP++GFGT      A  E +K    ES   AI+VG+ H D + +YQ+EE +G+AI   +  G +K R+++F TSKLW      +LV P+L+ SL+ L L+Y+DLYLIHFPVSLKPG       E      + +D    WEAME+C++ GL KSIGVSNF  ++LE +L     K  P  NQVE +    Q KL  +C+    +L
Sbjct:   13 GHSIPVLGFGTY-----ATEEHLKKKSMESTKIAIDVGFCHIDCSHLYQNEEEIGQAILSKIEDGTVK-REDIFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVDLYLIHFPVSLKPGNELLPKDEHGNLIFDTVDLCDTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHLYLNQSKLLAYCKMNDIVL 213          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: ALDR_HUMAN (Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 2.308e-35
Identity = 89/205 (43.41%), Postives = 125/205 (60.98%), Query Frame = 2
Query:   65 STGKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGTG-FPYNKE-DIEPLDYE--GVWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            + G  +P++G GT + P G  TEAVK     AI+VGYRH D A +YQ+E  +G AI + LR  ++K R+ELFI SKLW     + LV  A Q +L +L L+Y+DLYLIH+P   KPG   FP ++  ++ P D      W AMEE  + GL K+IG+SNF   ++E +L     K  PAVNQ+E +P   Q+KL  +C+ K  ++
Sbjct:    8 NNGAKMPILGLGTWKSPPGQVTEAVKV----AIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVK-REELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVV 207          
The following BLAST results are available for this feature:
BLAST of FC868730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
AK1CN_HORSE2.913e-3845.15Aldo-keto reductase family 1 member C23 OS=Equus c... [more]
PE2R_RABIT4.969e-3843.75Prostaglandin-E(2) 9-reductase OS=Oryctolagus cuni... [more]
DIDH_RAT6.489e-3843.353-alpha-hydroxysteroid dehydrogenase OS=Rattus nor... [more]
AK1C3_PONAB2.466e-3743.33Aldo-keto reductase family 1 member C3 homolog OS=... [more]
ALDR_PIG7.175e-3743.14Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2[more]
AK1C3_HUMAN7.175e-3742.86Aldo-keto reductase family 1 member C3 OS=Homo sap... [more]
AKC1H_RAT9.370e-3742.86Aldo-keto reductase family 1 member C18 OS=Rattus ... [more]
ALRA_DICDI2.087e-3642.79Aldose reductase A OS=Dictyostelium discoideum GN=... [more]
AKC1H_MOUSE1.353e-3543.00Aldo-keto reductase family 1 member C18 OS=Mus mus... [more]
ALDR_HUMAN2.308e-3543.41Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC31004B03EF AbioticL1 Citrus clementina cDNA clone C31004B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868730 ID=FC868730; Name=FC868730; organism=Citrus clementina; type=EST; length=722bp
GGCACCTTGATTCCTCTTCGTTGTCAATGAAACAATGGTAAGCATCCCAG
AGGCTCCTTTGGGCTCCACCGGCAAAACCATACCTCTTGTTGGCTTCGGC
ACGGCCCAATTTCCGTTCGGAGCAGCCACTGAAGCAGTAAAAGAATCCGT
TGTGCATGCAATAGAAGTCGGCTACAGACACTTCGACACCGCCGCAATAT
ACCAGTCCGAGGAGCCTCTTGGGGAAGCAATAGCCCAAGCGTTGCGTCTT
GGGCTCATCAAATCACGCGATGAGCTCTTTATCACTTCAAAGCTTTGGTT
CGGCCGCGCACACCGTCAACTTGTCCTCCCTGCGCTGCAAACTTCTCTCA
AGAATCTGGGGTTGGAGTATATTGATTTGTATCTGATTCATTTTCCGGTA
AGCTTGAAGCCTGGAACAGGGTTCCCATACAATAAAGAAGATATTGAGCC
ACTTGATTATGAGGGTGTTTGGGAGGCCATGGAGGAGTGTCAAAATCTCG
GCCTCACTAAATCCATTGGAGTCAGCAACTTTGCTTGCAAGAAACTTGAG
AGGTTACTTGCTACTGCAAAAATCCCTCCTGCTGTCAATCAAGTGGAGTT
GAACCCAGTTTGGCAGCAAAAGAAGCTGAGAGATTTCTGTGAGAAGAAGG
CATTCATATTACAGCCTACTCGCCGTTAGGAGCCAAAGAACAGTATGGGG
AACTAATCGAGTCATGGAATGT
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