FC868732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868732 vs. ExPASy Swiss-Prot
Match: RS4_XENTR (40S ribosomal protein S4 OS=Xenopus tropicalis GN=rps4 PE=2 SV=3) HSP 1 Score: 291.967 bits (746), Expect = 2.056e-78 Identity = 140/194 (72.16%), Postives = 160/194 (82.47%), Query Frame = 1 Query: 109 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGI 690 MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCKVR G KGIP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR+G+ Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
BLAST of FC868732 vs. ExPASy Swiss-Prot
Match: RS4X_DANRE (40S ribosomal protein S4, X isoform OS=Danio rerio GN=rps4x PE=2 SV=3) HSP 1 Score: 291.582 bits (745), Expect = 2.685e-78 Identity = 138/194 (71.13%), Postives = 160/194 (82.47%), Query Frame = 1 Query: 109 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGI 690 MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRTD TYP GFMDVVSI KT ENFRL+YD KGRF +H I +EEAK+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDTI++DL+T KIT+FIKF+ GN+ MVTGG N GR+G+ Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPTGFMDVVSIEKTGENFRLIYDVKGRFTVHRITNEEAKYKLCKVRKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFETGNMCMVTGGANLGRIGV 194
BLAST of FC868732 vs. ExPASy Swiss-Prot
Match: RS4_YEAST (40S ribosomal protein S4 OS=Saccharomyces cerevisiae GN=RPS4A PE=1 SV=3) HSP 1 Score: 290.812 bits (743), Expect = 4.580e-78 Identity = 138/193 (71.50%), Postives = 160/193 (82.90%), Query Frame = 1 Query: 109 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVG 687 MARG KKHLKRL AP HW+LDKL G +AP+PS+GPHK RE LPLI+ LRNRLKYAL REV AILMQRHV VD KVRTD TYPAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KIT+FIKFD G +V VTGGRN GR+G Sbjct: 1 MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIG 193
BLAST of FC868732 vs. ExPASy Swiss-Prot
Match: RS4_BOMMO (40S ribosomal protein S4 OS=Bombyx mori GN=RpS4 PE=2 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 7.812e-78 Identity = 138/193 (71.50%), Postives = 160/193 (82.90%), Query Frame = 1 Query: 109 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVG 687 MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+ QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV+ V G K +PY+ T+DGRTIRYPDPLIK ND+I+LD+ T KI +FIKF+ GN+ M+TGGRN GRVG Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 193
BLAST of FC868732 vs. ExPASy Swiss-Prot
Match: RS4C_SCHPO (40S ribosomal protein S4-C OS=Schizosaccharomyces pombe GN=rps4c PE=1 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.020e-77 Identity = 139/193 (72.02%), Postives = 158/193 (81.87%), Query Frame = 1 Query: 109 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVG 687 M RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL REV AILMQR + VD KVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H I EEAK+KLCKV+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LETNKI FIKFD VMVTGGRN GRVG Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRTDSTFPTGFMDVISVDKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVG 193
BLAST of FC868732 vs. ExPASy Swiss-Prot
Match: RS4B_SCHPO (40S ribosomal protein S4-B OS=Schizosaccharomyces pombe GN=rps4b PE=1 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.020e-77 Identity = 139/193 (72.02%), Postives = 158/193 (81.87%), Query Frame = 1 Query: 109 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVG 687 M RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL REV AILMQR + VD KVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H I EEAK+KLCKV+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LETNKI FIKFD VMVTGGRN GRVG Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIQVDGKVRTDSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVG 193
BLAST of FC868732 vs. ExPASy Swiss-Prot
Match: RS4A_SCHPO (40S ribosomal protein S4-A OS=Schizosaccharomyces pombe GN=rps4a PE=2 SV=2) HSP 1 Score: 289.656 bits (740), Expect = 1.020e-77 Identity = 139/193 (72.02%), Postives = 158/193 (81.87%), Query Frame = 1 Query: 109 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVG 687 M RG KKHLKR+ AP HW+LDKL G +APKPS GPHK+RECLPLI+ LRNRLKYAL REV AILMQR + VD KVRTD T+P GFMDV+S+ KT E+FRL+YD KGRF +H I EEAK+KLCKV+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LETNKI FIKFD VMVTGGRN GRVG Sbjct: 1 MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRTDSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVG 193
BLAST of FC868732 vs. ExPASy Swiss-Prot
Match: RS4_SPOFR (40S ribosomal protein S4 OS=Spodoptera frugiperda GN=RpS4 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.273e-77 Identity = 136/193 (70.47%), Postives = 161/193 (83.42%), Query Frame = 1 Query: 109 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVG 687 MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV+ I+ QR + VD KVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCKV+ V G K +P++ T+DGRTIRYPDPLIK ND+++LD+ T+KI +FIKF+ GN+ M+TGGRN GRVG Sbjct: 1 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTVHRITPEEAKYKLCKVKRVSTGPKNVPFLVTHDGRTIRYPDPLIKVNDSVQLDIATSKIMDFIKFESGNLCMITGGRNLGRVG 193
BLAST of FC868732 vs. ExPASy Swiss-Prot
Match: RS4Y1_MONDO (40S ribosomal protein S4, Y isoform 1 OS=Monodelphis domestica GN=RPS4Y1 PE=2 SV=3) HSP 1 Score: 288.115 bits (736), Expect = 2.968e-77 Identity = 137/194 (70.62%), Postives = 160/194 (82.47%), Query Frame = 1 Query: 109 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGI 690 MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRTD TYPAGFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCKVR + KGIP++ T+D RTIRYPDPLIK NDT++++LET KIT+FIKFD GN+ MVTGG N GR+G+ Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVATKGIPHLVTHDARTIRYPDPLIKVNDTVQINLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
BLAST of FC868732 vs. ExPASy Swiss-Prot
Match: RS4X_MONDO (40S ribosomal protein S4, X isoform OS=Monodelphis domestica GN=RPS4X PE=2 SV=3) HSP 1 Score: 288.115 bits (736), Expect = 2.968e-77 Identity = 138/194 (71.13%), Postives = 158/194 (81.44%), Query Frame = 1 Query: 109 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITEFIKFDVGNVVMVTGGRNRGRVGI 690 MARG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLI+ LRNRLKYALT EV I MQR + +D KVRTD TYP GFMDV+SI KT E+FRL+YDTKGRF +H I EEAK+KLCKVR G K IP++ T+D RTIRYPDPLIK NDTI++DLET KIT+FIKFD GN+ MVTGG N GR+G+ Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDTTYPVGFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTFVGTKAIPHLVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFIKFDTGNMCMVTGGANLGRIGV 194 The following BLAST results are available for this feature:
BLAST of FC868732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868732 ID=FC868732; Name=FC868732; organism=Citrus clementina; type=EST; length=692bpback to top |