FC868735

Overview
NameFC868735
Unique NameFC868735
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_YEAST (Protein transport protein SEC13 OS=Saccharomyces cerevisiae GN=SEC13 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.410e-40
Identity = 80/154 (51.95%), Postives = 98/154 (63.64%), Query Frame = 3
Query:  219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAP 680
            I   H + +HD  +D+YGKRLAT SSD +IKI  +     + + TL GH GPVW+V WAHPKFG+ILASCSYDG+V+IWKE N   W+Q      H +SVNS+ WAPHE G  L   SSDG +SV     +G      ID AH +G  S SWAP
Sbjct:    4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN-GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAP 155          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_KLULA (Protein transport protein SEC13 OS=Kluyveromyces lactis GN=SEC13 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.371e-40
Identity = 79/154 (51.30%), Postives = 98/154 (63.64%), Query Frame = 3
Query:  219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAP 680
            I   H + +HD  +D+YGKRLAT SSD ++KI  +     + + TL+GH GPVWQV WAHPKFG ILASCSYDG+V+IWKE N   W+Q      H +SVNSI WAPHE G  L   SSDG +SV     +G      ID AH +G+ +  WAP
Sbjct:    4 INNAHSELIHDAVLDYYGKRLATCSSDHTVKIFEVEGETHKLVDTLQGHEGPVWQVDWAHPKFGVILASCSYDGKVLIWKEVN-GRWSQIAAHEVHSASVNSIQWAPHEYGPLLLAASSDGKVSVVEFKENGTTSPIIID-AHSIGANTACWAP 155          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_CRYNE (Protein transport protein SEC13 OS=Cryptococcus neoformans GN=SEC13 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.371e-40
Identity = 83/168 (49.40%), Postives = 104/168 (61.90%), Query Frame = 3
Query:  219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIG-LSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGN-----------QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAPGM 686
            +ET HED +HD  +D+YGKRLAT SSD +I+I   +   A      LKGH   VWQV+WAHP FGSILASCSYDG+V IWKE             Q+ W +      H +SVNSIAWAP++LG  LAC SSDG +SV +   DG  +   I  AH  G+ ++SWAP +
Sbjct:   18 VETQHEDMIHDAQLDYYGKRLATCSSDRTIRIFNVIKGEAKGEPVILKGHTAAVWQVSWAHPSFGSILASCSYDGRVFIWKEVGQGQGKGSGGELQDGWERIKEHTLHTASVNSIAWAPYDLGPILACASSDGKVSVLSFQNDGSIE-VNIFPAHGTGANAISWAPSV 184          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_ASPFU (Protein transport protein sec13 OS=Aspergillus fumigatus GN=sec13 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.093e-39
Identity = 80/153 (52.29%), Postives = 102/153 (66.67%), Query Frame = 3
Query:  246 HDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN--------DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAP 680
            HD  +D+YG+RLAT SSD +IKI  +     + + TLKGH G VW VAWAHPKFG+ILAS SYDG+V+IW+E +QN         WT+   F+ H +SVN ++WAPHE G  LAC SSDG++SV     D  W T +I  AH +G  S+SWAP
Sbjct:   14 HDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQNATSPVAGSTWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVL-EFRDNSW-THQIFHAHGMGVNSISWAP 164          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_ASPOR (Protein transport protein sec13 OS=Aspergillus oryzae GN=sec13 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.428e-39
Identity = 79/154 (51.30%), Postives = 103/154 (66.88%), Query Frame = 3
Query:  243 VHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ--------NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAP 680
            +HD  +D+YG+RLAT SSD +IKI  +     + + TLKGH G VW +AWAHPKFG+ILAS SYDG+V+IW+E +Q        N WT+   F+ H +SVN ++WAPHE G  LAC SSDG++SV     D  W T +I  AH +G  S+SWAP
Sbjct:    1 MHDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLVETLKGHEGAVWCIAWAHPKFGTILASSSYDGKVLIWREQHQNTTSPVAVNTWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVL-EFQDNSW-THQIFHAHGMGVNSISWAP 152          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_ASHGO (Protein transport protein SEC13 OS=Ashbya gossypii GN=SEC13 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.428e-39
Identity = 78/154 (50.65%), Postives = 98/154 (63.64%), Query Frame = 3
Query:  219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAP 680
            I   H + +HD  +D+YGKRLAT SSD +I+I  +   + + + +L GH GPVWQV WAHPKFG ILASCSYDG+V+IWKE N   W+Q   +  H +SVNS+ WAPHE G  L C SSDG  SV     +G      ID AH +G  +  WAP
Sbjct:    4 ITNAHTELIHDAVLDYYGKRLATCSSDKTIQIFEVDGDSHKLVDSLHGHEGPVWQVDWAHPKFGVILASCSYDGKVLIWKEEN-GRWSQIAAYEVHSASVNSVKWAPHEYGPLLLCSSSDGKFSVVEFKENGTTSPIIID-AHAIGVNAACWAP 155          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_ASPCL (Protein transport protein sec13 OS=Aspergillus clavatus GN=sec13 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.865e-39
Identity = 80/157 (50.96%), Postives = 103/157 (65.61%), Query Frame = 3
Query:  243 VHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND--------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAPGMA 689
            +HD  +D+YG+RLAT SSD +IKI  +     +   TLKGH G VW VAWAHPKFG+ILAS SYDG+V+IW+E +Q+         WT+   F+ H +SVN ++WAPHE G  LAC SSDG++SV     D  W T +I  AH +G  S+SWAP  A
Sbjct:    2 IHDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLAETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQSPTSPAAGSAWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVL-EFRDNSW-THQIFHAHGMGVNSISWAPAAA 156          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_CHAGB (Protein transport protein SEC13 OS=Chaetomium globosum GN=SEC13 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.181e-39
Identity = 75/146 (51.37%), Postives = 100/146 (68.49%), Query Frame = 3
Query:  243 VHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAP 680
            +HD  +D+YG+RLAT SSD +IKI  +     +   TLKGH G VW V+WAHPK+G+ILAS  YDG+V+IW+E N   W + + F+ HK+SVN ++W+PHE G  LAC SSDGN+SV     +  W+ + I  AH +G  SVSWAP
Sbjct:    2 IHDAVLDYYGRRLATCSSDRTIKIFEIEGETQRLTETLKGHDGAVWCVSWAHPKYGNILASAGYDGKVLIWREQN-GAWQRIYDFSLHKASVNVVSWSPHEAGCVLACASSDGNVSVLEFKDNNSWEHS-IFHAHGLGVNSVSWAP 145          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_PHANO (Protein transport protein SEC13 OS=Phaeosphaeria nodorum GN=SEC13 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.835e-38
Identity = 79/148 (53.38%), Postives = 98/148 (66.22%), Query Frame = 3
Query:  246 HDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAPGMA 689
            HD  +D+YG+RLAT SSD +IKI  +       + TL+GH GPVW VAWAHPK+G+ILAS SYDG+VIIW+E   + W + +    H +SVN +AWAPHE+G  LAC SSDGN+SV     D  W    I QA   G  SVSWAP +A
Sbjct:   20 HDAVLDYYGRRLATCSSDKTIKIFEVEGDKHTLVETLRGHEGPVWCVAWAHPKYGNILASSSYDGKVIIWRE-QSSTWQKIYEVALHTASVNIVAWAPHEVGCLLACASSDGNVSVL-EFKDNAWSHV-IFQACGSGVNSVSWAPAVA 164          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SC132_CANGA (Protein transport protein SEC13-2 OS=Candida glabrata GN=SEC132 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.251e-35
Identity = 80/164 (48.78%), Postives = 101/164 (61.59%), Query Frame = 3
Query:  216 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLS--NSASQHLATLKGHRGPVWQVAWAHPKFG-SILASCSYDGQVIIWKEGNQNDWTQA---HTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRI-DQAHPVGSTSVSWAPGM 686
            KIE  HE  +H  A+++YG RLAT SSD ++KI  ++  N++S  L TL GH GPVW   W HP  G ++LA+C YDG+V+IWKE       Q    H    H +SVN + WAPHE GL L CGS+DG ISV     DG   +T+I D AH  G  S+SWAP M
Sbjct:    3 KIENAHEGVIHHAALNYYGTRLATCSSDKTVKIFEINDVNNSSSLLETLVGHEGPVWYADWCHPSLGENLLATCGYDGKVLIWKESGHGGKMQIIGKHAV--HSASVNCVKWAPHEYGLILLCGSADGKISV-VELKDGQIASTKILDNAHKFGVNSISWAPLM 163          
The following BLAST results are available for this feature:
BLAST of FC868735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
SEC13_YEAST6.410e-4051.95Protein transport protein SEC13 OS=Saccharomyces c... [more]
SEC13_KLULA8.371e-4051.30Protein transport protein SEC13 OS=Kluyveromyces l... [more]
SEC13_CRYNE8.371e-4049.40Protein transport protein SEC13 OS=Cryptococcus ne... [more]
SEC13_ASPFU1.093e-3952.29Protein transport protein sec13 OS=Aspergillus fum... [more]
SEC13_ASPOR1.428e-3951.30Protein transport protein sec13 OS=Aspergillus ory... [more]
SEC13_ASHGO1.428e-3950.65Protein transport protein SEC13 OS=Ashbya gossypii... [more]
SEC13_ASPCL1.865e-3950.96Protein transport protein sec13 OS=Aspergillus cla... [more]
SEC13_CHAGB3.181e-3951.37Protein transport protein SEC13 OS=Chaetomium glob... [more]
SEC13_PHANO7.835e-3853.38Protein transport protein SEC13 OS=Phaeosphaeria n... [more]
SC132_CANGA1.251e-3548.78Protein transport protein SEC13-2 OS=Candida glabr... [more]

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Properties
Property NameValue
Genbank descriptionC31004B08EF AbioticL1 Citrus clementina cDNA clone C31004B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868735 ID=FC868735; Name=FC868735; organism=Citrus clementina; type=EST; length=690bp
GAGGAAAGAAGCTTTTTTAAGTTCCGACCACCACGGAAAAAGCCTAAAAA
CGTTTATTACTCTCAGCCGGTGCTACTGGTCGGTCTTCGAATCCGCTCCT
CTCTTAAGAAATTTGGAGCTGAGAACATAAGATAAAAAGGAGCTACGAAC
TAGTGATCAAGGAGTTGAAGTTTGAGGGGTAAAATAAAGAAATATAAAGT
AAGATGCCTGCACAAAAAATTGAAACTGGTCATGAAGACACTGTCCATGA
TGTAGCCATGGATTTCTATGGAAAACGTTTAGCCACAGCTTCGTCTGACT
CCAGCATTAAGATAATTGGTTTAAGCAACTCTGCTTCCCAGCACCTTGCT
ACATTGAAAGGCCATAGAGGTCCTGTTTGGCAAGTTGCATGGGCACACCC
CAAGTTTGGGTCAATCCTTGCTTCCTGTTCCTATGATGGCCAAGTTATTA
TCTGGAAGGAAGGTAATCAAAATGATTGGACACAGGCTCATACTTTTAAT
GATCATAAATCATCTGTCAACTCCATTGCGTGGGCACCTCATGAACTTGG
TCTCTCCTTGGCTTGTGGATCTTCTGATGGGAACATCTCAGTCTTTACTG
CTACAGCTGATGGTGGCTGGGATACTACCAGGATAGACCAGGCCCATCCA
GTCGGAAGTACATCTGTTTCATGGGCCCCCGGCATGGCTC
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