FC868735

Overview
NameFC868735
Unique NameFC868735
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: CIAO1_DROSI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila simulans GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 48/153 (31.37%), Postives = 72/153 (47.06%), Query Frame = 3
Query:  219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT-ATADGGWDTTRIDQAHPVGSTSVSW 674
            +  GH+ T+ ++     G+ LA+AS D++  I   S+   +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I +F     D  WD T    +H    TS  W
Sbjct:   54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW--HPTKDVLASASYDNTIKMFAEEPIDNDWDCTATLTSH----TSTVW 198          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: CIAO1_DROSE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila sechellia GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 48/153 (31.37%), Postives = 72/153 (47.06%), Query Frame = 3
Query:  219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT-ATADGGWDTTRIDQAHPVGSTSVSW 674
            +  GH+ T+ ++     G+ LA+AS D++  I   S+   +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I +F     D  WD T    +H    TS  W
Sbjct:   54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW--HPTKDVLASASYDNTIKMFAEEPIDNDWDCTATLTSH----TSTVW 198          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: CIAO1_DROME (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila melanogaster GN=Ciao1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 48/153 (31.37%), Postives = 72/153 (47.06%), Query Frame = 3
Query:  219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT-ATADGGWDTTRIDQAHPVGSTSVSW 674
            +  GH+ T+ ++     G+ LA+AS D++  I   S+   +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I +F     D  WD T    +H    TS  W
Sbjct:   54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW--HPTKDILASASYDNTIKMFAEEPIDNDWDCTATLTSH----TSTVW 198          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: CIAO1_DROER (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila erecta GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 47/153 (30.72%), Postives = 72/153 (47.06%), Query Frame = 3
Query:  219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA-TADGGWDTTRIDQAHPVGSTSVSW 674
            +  GH+ T+ ++     G+ LA+AS D++  I   S+   +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I ++     D  WD T    +H    TS  W
Sbjct:   54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVW--HPTKEVLASASYDNTIKMYAEDPVDNDWDCTATLTSH----TSTIW 198          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: CIAO1_DROYA (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila yakuba GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 47/153 (30.72%), Postives = 72/153 (47.06%), Query Frame = 3
Query:  219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT-ATADGGWDTTRIDQAHPVGSTSVSW 674
            +  GH+ T+ ++     G+ LA+AS D++  I   S+   +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I ++     D  WD T    +H    TS  W
Sbjct:   54 LSDGHKRTIREIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVW--HPTKEILASASYDNTIKMYAEEPIDNDWDCTATLTSH----TSTIW 198          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: CIAO1_DROMO (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila mojavensis GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12
Identity = 49/154 (31.82%), Postives = 74/154 (48.05%), Query Frame = 3
Query:  219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAHPVGSTSVSWA 677
            +  GH+ T+ +V     G+ LA+AS D++  I     S  +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I ++  +A D  WD T    +H    TS  W+
Sbjct:   54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIW----SKHECTATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVW--HPTKEILASASYDNTIKMYAESALDSDWDCTATLSSH----TSTVWS 195          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: CIAO1_DROGR (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila grimshawi GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12
Identity = 49/154 (31.82%), Postives = 74/154 (48.05%), Query Frame = 3
Query:  219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAHPVGSTSVSWA 677
            +  GH+ T+ +V     G+ LA+AS D++  I     S  +  ATL+GH   V  V+W+    G +LA+CS D  V IW+    +++  A   N H   V  + W P +    LA  S D  I ++  +A D  WD T    +H    TS  W+
Sbjct:   54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIW----SKHECNATLEGHENEVKSVSWSQS--GGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSK--EILASASYDNTIKMYAESALDSDWDCTATLSSH----TSTVWS 195          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: CIAO1_DANRE (Probable cytosolic iron-sulfur protein assembly protein ciao1 OS=Danio rerio GN=ciao1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 50/155 (32.26%), Postives = 74/155 (47.74%), Query Frame = 3
Query:  219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAP 680
            +  GH+ TV  VA    GK LA+AS D++  I   ++   + L  L+GH   V  VAWA    GS+LA+CS D  V IW+   ++++      N H   V  + W P  EL   LA  S D  I ++    D  W+     + H     S+++ P
Sbjct:   56 LSDGHQRTVRKVAWSPCGKYLASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWA--PSGSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQEL---LASASYDNKICIY-KEEDDDWECRATLEGHESTVWSLTFDP 204          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: CIO1A_SALSA (Probable cytosolic iron-sulfur protein assembly protein ciao1-A OS=Salmo salar GN=ciao1a PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.252e-11
Identity = 51/153 (33.33%), Postives = 71/153 (46.41%), Query Frame = 3
Query:  219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSW 674
            ++ GH+  V  VA    G  LA+AS D++  I    N   + L  L+GH   V  VAWA    G+ LA+CS D  V IW+   ++++      N H   V  + W P  EL   LA  S D N+ V+    D  W+     +A   G TS  W
Sbjct:   56 LQDGHQRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWA--PSGNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQEL---LASCSYDNNVCVY-KEEDDDWEC----RATLEGHTSTVW 198          
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: CIAO1_RAT (Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Rattus norvegicus GN=Ciao1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.252e-11
Identity = 44/154 (28.57%), Postives = 71/154 (46.10%), Query Frame = 3
Query:  219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAP 680
            +  GH+ TV  VA    G  LA+AS D++  I   +    + + TL+GH   V  VAWA    G++LA+CS D  V +W+   ++++      N H   V  + W P +    LA  S D  + ++    D  W      + H     S+++ P
Sbjct:   56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWA--PSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ--ELLASASYDDTVKLYQEEGD-DWVCCATLEGHESTVWSIAFDP 204          
The following BLAST results are available for this feature:
BLAST of FC868735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
CIAO1_DROSI1.139e-1231.37Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROSE1.139e-1231.37Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROME1.139e-1231.37Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROER1.139e-1230.72Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROYA1.488e-1230.72Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROMO2.538e-1231.82Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROGR5.654e-1231.82Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DANRE7.385e-1232.26Probable cytosolic iron-sulfur protein assembly pr... [more]
CIO1A_SALSA6.252e-1133.33Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_RAT6.252e-1128.57Probable cytosolic iron-sulfur protein assembly pr... [more]

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Properties
Property NameValue
Genbank descriptionC31004B08EF AbioticL1 Citrus clementina cDNA clone C31004B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868735 ID=FC868735; Name=FC868735; organism=Citrus clementina; type=EST; length=690bp
GAGGAAAGAAGCTTTTTTAAGTTCCGACCACCACGGAAAAAGCCTAAAAA
CGTTTATTACTCTCAGCCGGTGCTACTGGTCGGTCTTCGAATCCGCTCCT
CTCTTAAGAAATTTGGAGCTGAGAACATAAGATAAAAAGGAGCTACGAAC
TAGTGATCAAGGAGTTGAAGTTTGAGGGGTAAAATAAAGAAATATAAAGT
AAGATGCCTGCACAAAAAATTGAAACTGGTCATGAAGACACTGTCCATGA
TGTAGCCATGGATTTCTATGGAAAACGTTTAGCCACAGCTTCGTCTGACT
CCAGCATTAAGATAATTGGTTTAAGCAACTCTGCTTCCCAGCACCTTGCT
ACATTGAAAGGCCATAGAGGTCCTGTTTGGCAAGTTGCATGGGCACACCC
CAAGTTTGGGTCAATCCTTGCTTCCTGTTCCTATGATGGCCAAGTTATTA
TCTGGAAGGAAGGTAATCAAAATGATTGGACACAGGCTCATACTTTTAAT
GATCATAAATCATCTGTCAACTCCATTGCGTGGGCACCTCATGAACTTGG
TCTCTCCTTGGCTTGTGGATCTTCTGATGGGAACATCTCAGTCTTTACTG
CTACAGCTGATGGTGGCTGGGATACTACCAGGATAGACCAGGCCCATCCA
GTCGGAAGTACATCTGTTTCATGGGCCCCCGGCATGGCTC
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