FC868740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB10_RAT (Proteasome subunit beta type-10 OS=Rattus norvegicus GN=Psmb10 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.242e-57 Identity = 106/197 (53.81%), Postives = 143/197 (72.59%), Query Frame = 1 Query: 118 VPSRGGFSFDLCRRNDMLAK--KGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV*AALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGI 702 V RGGFSF+ C+RN L G+ +P RKTGTTI GL+F+DGVILGADTRAT +V DK+CEKIH++AP IYCCGAG AADTE T M +S+++LH TGRE RV T +L++ LF YQG+V A+L++GGVD GP L++++PHGS LPF +GSG AA+A+ E +++ +T + +L+V+AI +GI Sbjct: 6 VEHRGGFSFENCQRNASLEHVLPGLRVPLARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVDLNGPQLYSVHPHGSYSRLPFTALGSGQDAAVALLEDRFQPNMTLEAAQELLVEAITAGI 202
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB7_YEAST (Proteasome component PUP1 OS=Saccharomyces cerevisiae GN=PUP1 PE=1 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.816e-56 Identity = 106/191 (55.50%), Postives = 143/191 (74.87%), Query Frame = 1 Query: 133 GFSFDLCRRNDMLAKKGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV*AALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIF 705 G SFD +RN+ LA+ P TGTTIVG+ F +GV++ ADTR+T+GPIV DKNC K+H ++P I+C GAGTAADTEAVT ++ S ++LH +T RE RVV+AL +LK+HLF YQG++ A L++ GVD TG HL +I+ HGSTD + ++GSGSLAAMA+ ES +K+ LTK+E I+L DAI +GI+ Sbjct: 3 GLSFDNYQRNNFLAENSHTQPKATSTGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIW 193
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB10_MOUSE (Proteasome subunit beta type-10 OS=Mus musculus GN=Psmb10 PE=1 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.098e-56 Identity = 106/197 (53.81%), Postives = 141/197 (71.57%), Query Frame = 1 Query: 118 VPSRGGFSFDLCRRNDMLAK--KGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV*AALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGI 702 V GGFSF+ C+RN L G+ +P RKTGTTI GL+F+DGVILGADTRAT +V DK+CEKIH++AP IYCCGAG AADTE T M +S+++LH TGRE RV T +L++ LF YQG+V A+LV+GGVD GP L+ ++PHGS LPF +GSG AA+A+ E +++ +T + +L+V+AI +GI Sbjct: 6 VEPTGGFSFENCQRNASLEHVLPGLRVPHARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLVVGGVDLNGPQLYEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGI 202
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB10_BOVIN (Proteasome subunit beta type-10 OS=Bos taurus GN=PSMB10 PE=1 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 4.046e-56 Identity = 106/192 (55.21%), Postives = 138/192 (71.88%), Query Frame = 1 Query: 133 GFSFDLCRRNDML--AKKGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV*AALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGI 702 GFSF+ C RN L A G+ +P RKTGTTI GL+FQDGVILGADTRAT +V DK CEKIH++AP IYCCGAG AAD E T M +S ++LH TGRE RV T +L++ LF YQGYV A+L++GGVD TGP L++++PHGS LPF +GSG AA+A+ E +++ +T + +L+V+AI +GI Sbjct: 11 GFSFENCERNAALQRALPGLRVPHARKTGTTIAGLVFQDGVILGADTRATNDSVVADKICEKIHFIAPKIYCCGAGVAADAEMTTRMAASNMELHALSTGRECRVATVTRMLRQTLFRYQGYVGASLIVGGVDFTGPQLYSVHPHGSYSRLPFTALGSGQDAAIAVLEDRFQPNMTLEAAQELLVEAITAGI 202
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB7_ENCCU (Probable proteasome subunit beta type-7 OS=Encephalitozoon cuniculi GN=PUP1 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.804e-38 Identity = 82/166 (49.40%), Postives = 110/166 (66.27%), Query Frame = 1 Query: 205 KTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV*AALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGI 702 KTGTTIVG+ ++ GVIL ADTR+T+GP+V DKNC KIH + I CCGAGTAAD V M S +L+L + R V + +HL Y G + AAL++GG+D G HL+ I+PHGS ++ F ++GSGSL A+A ES+Y+ + KDE I L DA+ +GI Sbjct: 4 KTGTTIVGMKYKTGVILAADTRSTQGPVVSDKNCVKIHQITDKIMCCGAGTAADASRVARMASRELRLFQNKYLRLPLVSHFRKVCTQHLHKYGGGIGAALIVGGIDSEGCHLYEIHPHGSENSALFVSLGSGSLGAIATLESRYR-AMDKDEAIDLACDAVKAGI 168
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB6_ARATH (Proteasome subunit beta type-6 OS=Arabidopsis thaliana GN=PBA1 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.519e-22 Identity = 59/174 (33.91%), Postives = 96/174 (55.17%), Query Frame = 1 Query: 184 VNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV*AALVLGGVD-CTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGI 702 +NL + GTTI+G+ + GV+LGAD+R + G V ++ +KI + N+Y C +G+AAD++ V+D V L H G+ + V + L++ +N + + L++GG D G ++ I G+ PFA GSGS F+ +K+ +TK+E QLVV A+ I Sbjct: 3 LNLDAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAI 176
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB6_TOBAC (Proteasome subunit beta type-6 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.515e-22 Identity = 58/165 (35.15%), Postives = 93/165 (56.36%), Query Frame = 1 Query: 211 GTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV*AALVLGGVD-CTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGI 702 GTTI+G+ + GV+LGAD+R + G V ++ +KI + N+Y C +G+AAD++ V+D V L H G+ + V A L + +N + + +++GG D G ++ I P G+ PFA GSGS F+ +KEG+T++E +LVV A+ I Sbjct: 13 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDRLQTGMIIGGWDKYEGGKIYGIPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAI 177
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB6_SCHPO (Probable proteasome subunit beta type-6 OS=Schizosaccharomyces pombe GN=SPBC4C3.10c PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.112e-21 Identity = 54/163 (33.13%), Postives = 94/163 (57.67%), Query Frame = 1 Query: 205 KTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV*AALVLGGVD-CTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAI 690 + GTTI L ++DGVIL AD+R T G + ++ +K+ + NI+CC +G+AADT+ V D++ L ++R G + V TA TL + + + + A L++ G D TG +++I GS P A GSGS ++ ++E +T++E ++ + +A+ Sbjct: 22 RMGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGLIVAGYDEKTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAV 184
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB6_BOVIN (Proteasome subunit beta type-6 OS=Bos taurus GN=PSMB6 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.112e-21 Identity = 57/162 (35.19%), Postives = 92/162 (56.79%), Query Frame = 1 Query: 208 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV*AALVLGGVD-CTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAI 690 TGTTI+ + F GV+LGAD+R T G + ++ +K+ + I+CC +G+AADT+AV D V+ QL H V TA +L K+ + Y+ + A +++ G D G ++++ G PFA GSGS ++ Y+EG+TK+E +Q +A+ Sbjct: 33 TGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANAL 194
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB6_RAT (Proteasome subunit beta type-6 OS=Rattus norvegicus GN=Psmb6 PE=1 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 2.477e-21 Identity = 57/162 (35.19%), Postives = 92/162 (56.79%), Query Frame = 1 Query: 208 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV*AALVLGGVD-CTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAI 690 TGTTI+ + F GV+LGAD+R T G + ++ +K+ + +I+CC +G+AADT+AV D V+ QL H V TA +L K+ + Y+ + A +++ G D G ++++ G FA GSGS ++ Y+EG+TKDE +Q +A+ Sbjct: 32 TGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANAL 193 The following BLAST results are available for this feature:
BLAST of FC868740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868740 ID=FC868740; Name=FC868740; organism=Citrus clementina; type=EST; length=721bpback to top |