FC868740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB9_MUSPL (Proteasome subunit beta type-9 OS=Mus platythrix GN=Psmb9 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14 Identity = 49/161 (30.43%), Postives = 82/161 (50.93%), Query Frame = 1 Query: 208 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV*AALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAI 690 TGTTI+ + F GV++G+D+R + G V ++ +K+ + I+C +G+AAD +A+ DM + QL+LH V+ A ++K + Y+ + A L++ G D G PF GSGS ++ YK G+T +E + +AI Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTSEECRRFTTNAI 179
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB9_MUSSI (Proteasome subunit beta type-9 OS=Mus spicilegus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-14 Identity = 49/161 (30.43%), Postives = 82/161 (50.93%), Query Frame = 1 Query: 208 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV*AALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAI 690 TGTTI+ + F GV++G+D+R + G V ++ +K+ + I+C +G+AAD +A+ DM + QL+LH V+ A ++K + Y+ + A L++ G D G PF GSGS ++ YK G+T +E + +AI Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAI 179
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB9_MUSDU (Proteasome subunit beta type-9 OS=Mus dunni GN=Psmb9 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-14 Identity = 49/161 (30.43%), Postives = 82/161 (50.93%), Query Frame = 1 Query: 208 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV*AALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAI 690 TGTTI+ + F GV++G+D+R + G V ++ +K+ + I+C +G+AAD +A+ DM + QL+LH V+ A ++K + Y+ + A L++ G D G PF GSGS ++ YK G+T +E + +AI Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAI 179
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB9_MOUSE (Proteasome subunit beta type-9 OS=Mus musculus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-14 Identity = 49/161 (30.43%), Postives = 82/161 (50.93%), Query Frame = 1 Query: 208 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV*AALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAI 690 TGTTI+ + F GV++G+D+R + G V ++ +K+ + I+C +G+AAD +A+ DM + QL+LH V+ A ++K + Y+ + A L++ G D G PF GSGS ++ YK G+T +E + +AI Sbjct: 19 TGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAI 179
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14 Identity = 47/165 (28.48%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 211 GTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-V*AALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGI 702 GTT VG+ +DGV+ + RA+ G ++ K +KI + +I AG+ AD +++ + ++ L+R + + A L L + + Y +LGGVD G ++++ P G F + GSGS A + E +Y + L DE + + + AI S + Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGVDENGAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAM 173
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB6_ENCCU (Probable proteasome subunit beta type-6 OS=Encephalitozoon cuniculi GN=PRE3 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13 Identity = 46/165 (27.88%), Postives = 84/165 (50.91%), Query Frame = 1 Query: 208 TGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYV*AALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGI 702 TGTTI+ + + DGV++GAD+R + G V + +K+ + I+ C +G++ADT+ ++ + L ++ +V A L K ++ + A L++ G D P + I GS +A GSGS + ++ G++ +EGI+ V +A+ I Sbjct: 9 TGTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADTQMISSYLRMYLSMYSQLEDSIPQVQRAAALASKIIYENPSLL-AGLIVAGYD-DKPRVFNISLGGSLTERDWAIGGSGSAFIYGYCDVNWRSGMSLEEGIRFVRNAVSCAI 171
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13 Identity = 51/167 (30.54%), Postives = 82/167 (49.10%), Query Frame = 1 Query: 205 KTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRV---VTALTLLKKHLFNYQGY--V*AALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAI 690 K GTT +G+ ++GV+LG D R T ++ ++ EK++ + +I AG AD + + + Q +RY G V V A+ LK+ + G AL++ GVD G L P G+ +G G A+ +FE +Y+E +T E I+L V A+ Sbjct: 34 KRGTTALGIKVEEGVVLGVDKRVTS-KLIEPESIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTKGCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYREDMTLQEAIELAVRAL 199
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB5B_ARATH (Proteasome subunit beta type-5-B OS=Arabidopsis thaliana GN=PBE2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12 Identity = 59/192 (30.73%), Postives = 94/192 (48.96%), Query Frame = 1 Query: 139 SFDLCRRNDM--LAKKGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-V*AALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIF 705 SFDL R D KK V + K GTT + IF++GV++ AD+RA+ G + ++ +KI + P + AG AAD + + + +LH R V A LL L++Y+G + ++ G D TGP L+ + G ++GSGS A + +S YK ++ +E +L +I F Sbjct: 32 SFDLPRTTDFDGFQKKAVEMVKPAK-GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATF 222
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSB5_SPIOL (Proteasome subunit beta type-5 OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12 Identity = 58/187 (31.02%), Postives = 91/187 (48.66%), Query Frame = 1 Query: 139 SFDLCRRNDM--LAKKGVNLPSFRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGY-V*AALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAI 690 SFDL D K+ V + K GTT + IF+ GV++ AD+RA+ G + ++ +KI + P + AG AAD + + + +LH R V A LL L+NY+G + ++ G D TGP L+ + G ++GSGS A + ++ YK +T +E +L AI Sbjct: 30 SFDLPNPTDFDGFQKEAVQMVKPAK-GTTTLAFIFKHGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYNYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGMRFSVGSGSPYAYGVLDNGYKYDMTVEEASELARRAI 215
BLAST of FC868740 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12 Identity = 52/167 (31.14%), Postives = 84/167 (50.30%), Query Frame = 1 Query: 205 KTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESR---VVTALTLLKKHLFNYQGY--V*AALVLGGVDCTGPHLHTIYPHGSTDTLPFANMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAI 690 K G T VG+ +DGV+L + R T ++ ++ EKI + +I +G AD + + + Q+HR G + +V + LK+ Y G AAL++ GV+ P L+ P G+ +GSG AMA+FE KY++ +T DE I+L + A+ Sbjct: 34 KRGATAVGVKCKDGVVLAVEKRITSR-LIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVN-DKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAIKLAIFAL 198 The following BLAST results are available for this feature:
BLAST of FC868740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868740 ID=FC868740; Name=FC868740; organism=Citrus clementina; type=EST; length=721bpback to top |