FC868742

Overview
NameFC868742
Unique NameFC868742
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3371 contig Ccv1_Contig3371:187..926. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA7_HORVU (Nitrate reductase [NAD(P)H] OS=Hordeum vulgare GN=NAR-7 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.016e-33
Identity = 84/213 (39.44%), Postives = 110/213 (51.64%), Query Frame = 3
Query:  102 RHPIL-QINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            RHP L ++  K PFN+EPP   L+S  ++TPV   Y RNHG +P  D   ++ V + GL++      M + +          TL CAGNRR   + VR   G  W   AI   VW G +L DVL   G+     +      +V F   +      G  Y  S+  S A +P  DV+LAY  NGEPL  DHG+P+RV+VPG IG R VKWL  I
Sbjct:   84 RHPALVRLTGKHPFNSEPPLPRLMSHGFITPVPLHYVRNHGAVPKAD-WSTWTVEVTGLVKRPVKFTMEELVTGFQAVEFPVTLVCAGNRRKEQNMVRQSSGFNWGPGAISTTVWRGVRLRDVLRRCGV-----MGAGAASNVCFEGAEDLPGGGGCKYGTSLRRSVAMDPARDVILAYMQNGEPLAPDHGFPVRVIVPGFIGGRMVKWLKRI 290          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.733e-33
Identity = 80/209 (38.28%), Postives = 109/209 (52.15%), Query Frame = 3
Query:  111 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDI-RMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            ++++  K PFN+EPP   L+   ++TPV   Y RNHGP+P     E + V + GL+       M  +    P     ATL CAGNRR   + V+   G  W  +AI  +VW G  L  +L+  GI   T     G  HV F   +      G  Y  SI    A +P  D++LAY  NGEPL+ DHG+P+R+++PG IG R VKWL  I
Sbjct:   89 LVRLTGKHPFNSEPPLPRLMHHGFITPVPLHYVRNHGPVPRAR-WEDWTVEVTGLVTRPTCFTMEQLLHDFPSREFPATLVCAGNRRKEQNMVKQSIGFNWGAAAISTSVWRGVPLRTLLKSCGIYTRTK----GALHVCFEGAEDLPGGGGSKYGTSILREVALDPSRDIILAYMQNGEPLSPDHGFPVRMIIPGFIGGRMVKWLKRI 292          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA2_BRANA (Nitrate reductase [NADH], clone PBNBR1412 OS=Brassica napus GN=NIA2 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.860e-33
Identity = 79/209 (37.80%), Postives = 110/209 (52.63%), Query Frame = 3
Query:  111 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            ++++  K PFNAEPP   L+   ++TPV   Y RNHG +P  D  E + V I GL++      M + I   P      TL CAGNRR   + V+   G  W  + +  ++W G  L+++L   GI +     R GG +V F   +      G  Y  SI    A +P  D++LAY  NGE L  DHG+P+R++VPG IG R VKWL  I
Sbjct:  111 MVRLTGKHPFNAEPPLPRLMHHGFITPVPLHYVRNHGTVPKADWSE-WTVEITGLVKRPAKFTMEELISEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGSAGVSTSLWKGVPLSEILGRCGIYS----RRGGGLNVCFEGAEDLPGGGGSKYGTSIKKEMAMDPARDIILAYMQNGELLTPDHGFPVRIIVPGFIGGRMVKWLKRI 314          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_CICIN (Nitrate reductase [NADH] OS=Cichorium intybus GN=NIA PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.042e-33
Identity = 77/213 (36.15%), Postives = 112/213 (52.58%), Query Frame = 3
Query:  102 RHP-ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            R+P ++++  K PFN+EPP + L+   ++TP    Y RNHGP+P     E + V ICGL++      M   +   P      TL CAGNRR   +  +   G  W  + I  +VW G  L  +L+  GI +     + G  +V F   +      G  Y  SI +  A +P  D++LAY  NGE L+ DHG+P+R+++PG IG R VKWL  I
Sbjct:  101 RNPSMVRLTGKHPFNSEPPLNKLMQHGFITPDPLHYVRNHGPVPNAT-WEDWTVEICGLVKRPARFSMTQLVNEFPSREFPVTLVCAGNRRKEQNLTKQTIGFNWGAAGISTSVWKGVPLVHILKRCGIYS----RKKGALNVCFEGAEDLPGGGGSKYGTSIKIEMAMDPARDIILAYMQNGEKLSPDHGFPVRMIIPGFIGGRMVKWLKRI 308          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA1_ORYSJ (Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. japonica GN=NIA1 PE=2 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 6.585e-33
Identity = 78/213 (36.62%), Postives = 113/213 (53.05%), Query Frame = 3
Query:  102 RHP-ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            R+P ++++  K P N EPP + L+   ++TP    Y RNHG +P   D  ++ V + GL++    L M + +   P   I  TL CAGNRR   + V+   G  W  + +  +VW GA+L DVL   GI      ++ G  +V F   +      G  Y  SI    A +P  D++LAY  NGEPL  DHG+P+R ++PG IG R VKW+  I
Sbjct:  108 RNPSLIRLTGKHPLNCEPPLARLMHHGFITPAALHYVRNHGAVPR-GDWSTWTVDVTGLVKRPMRLTMDELVNGFPAVEIPVTLVCAGNRRKEQNMVQQTVGFNWGAAGVSTSVWRGARLRDVLRRCGI----MPSKGGALNVCFEGAEDLPGGGGSKYGTSITRQWALDPSRDIMLAYMQNGEPLLPDHGFPVRAIIPGCIGGRMVKWVKRI 315          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_PETHY (Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.600e-33
Identity = 77/211 (36.49%), Postives = 111/211 (52.61%), Query Frame = 3
Query:  111 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIP--IVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            ++++  K PFN+EPP + L+   ++TPV   Y RNHGP+P  + DD   + V + GL++      M   +   P   +  TL CAGNRR   + V+   G  W  +A+   VW G  L  +L+  GI + T     G  ++ F   D      G  Y  SI    A +P  D+++AY  NGE L  DHG+PLR+++PG IG R VKWL  I
Sbjct:  107 MIRLTGKHPFNSEPPLARLMHHGFITPVPLHYVRNHGPVPKGMWDD---WTVEVTGLVKRPMKFTMEQLVNEFPSRELPVTLVCAGNRRKEQNMVKQTIGFNWGAAAVSTTVWRGVPLRAILKRCGIYSRTK----GALNICFEGADVLPGGGGSKYGTSIKKEFAMDPSRDIIIAYMQNGEKLTPDHGFPLRMIIPGFIGGRMVKWLKRI 310          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_PICAN (Nitrate reductase [NADPH] OS=Pichia angusta GN=YNR1 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.467e-32
Identity = 78/208 (37.50%), Postives = 111/208 (53.37%), Query Frame = 3
Query:  111 ILQINSKEPFNAEPPRSALISS-YVTPVDFFYKRNHGPIPIVDD--IESYYVSICGLIENSKDLFMRDI-RMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWL 722
            +L++    PFN+EPP + L  S ++TPV   + RNHGP+P V D  I  + VSI G++E    + + DI      Y+   T+ CAGNRR   + V+   G  W  +    ++W+G  L DV+                K   FV ++       G Y+  I LS   +PE  +++AY+ NGE L+ DHG PLRVV+PG IG RSVKWL
Sbjct:   54 LLRLTGSHPFNSEPPLTKLYDSGFLTPVSLHFVRNHGPVPYVPDENILDWEVSIEGMVETPYKIKLSDIMEQFDIYSTPVTMVCAGNRRKEQNMVKKGAGFNWGAAGTSTSLWTGCMLGDVIGKA----------RPSKRARFVWMEGADNPANGAYRTCIRLSWCMDPERCIMIAYQQNGEWLHPDHGKPLRVVIPGVIGGRSVKWL 251          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_LOTJA (Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.574e-32
Identity = 81/210 (38.57%), Postives = 109/210 (51.90%), Query Frame = 3
Query:  111 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFM-RDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRS-GGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            ++++  K PFN+EPP   L+   ++TPV   Y RNHGP+P     + + V + GL++      M R +R  P   +  TL CAGNRR   + VR   G  W  + +  +VW G  L  +L    I      TRS G  HV F   +      G  Y  SI    A +P  DV+LAY  NGE L  DHG+P+RV++PG IG R VKWL  I
Sbjct:   92 MVRLTGKHPFNSEPPLPRLMHHGFITPVPLHYVRNHGPVPKAR-WDDWTVEVTGLVKTPTRFSMDRLVRDFPSRELPVTLVCAGNRRKEQNMVRQSIGFNWGSAGVSTSVWRGVSLRHILRRCRIQ-----TRSRGALHVCFEGDEDLPGGGGSKYSTSIRREVAMDPSRDVILAYMQNGEVLAPDHGFPVRVIIPGFIGGRMVKWLKRI 295          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_SOLLC (Nitrate reductase [NADH] OS=Solanum lycopersicum GN=NIA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.280e-32
Identity = 74/209 (35.41%), Postives = 108/209 (51.67%), Query Frame = 3
Query:  111 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            ++++  K PFN+EPP S L+   ++TPV   Y RNHGP+P       + V + GL++      M   +   P      TL CAGNRR   + V+   G  W  +A+   VW G  L  +L+  G+ +     + G  +V F   D      G  Y  SI    A +P  D+++AY  NGE L+ DHG+P+R+++PG IG R VKWL  I
Sbjct:  108 LIRLTGKHPFNSEPPLSRLMHHGFITPVPLHYVRNHGPVPKAS-WSDWTVEVTGLVKRPMKFTMDQLVNEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGAAAVSTTVWRGVPLRALLKRCGVQS----KKKGALNVCFEGSDVLPGGGGSKYGTSIKKEFAMDPSRDIIVAYMQNGEMLSPDHGFPVRMIIPGFIGGRMVKWLKRI 311          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_FUSOX (Nitrate reductase [NADPH] OS=Fusarium oxysporum GN=NIA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.508e-32
Identity = 81/227 (35.68%), Postives = 118/227 (51.98%), Query Frame = 3
Query:   66 LTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISS-YVTPVDFFYKRNHGPIPIV--DDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTIT 734
            L  P ++ +  PR  ++++    PFN E P S L    ++T  +  Y RNHG +P    DDI  +   I GL+EN   + +RD I    +     T  CAGNRR   + VR  KG  W  + +  A+W+G  + D+L         +  + G ++V F   DK      G Y  SI L+   +P   V++A++MNG PL  DHG P+R+V+PG IG RS+KWL  IT
Sbjct:   83 LKTPDNFVERDPR--LIRLTGVHPFNVEAPLSDLYDEGFLTSENLHYVRNHGHVPRCEDDDILDWEFEISGLVENPIKMNVRDLINDYQQLTYPVTFVCAGNRRKEQNIVRKTKGFSWGPAGLSTALWTGVAIGDLLS-------AAKPKRGARYVCFEGADKLPN---GYYGTSIKLNWCMDPNRGVMVAHKMNGNPLPPDHGKPVRIVIPGQIGGRSIKWLKKIT 297          
The following BLAST results are available for this feature:
BLAST of FC868742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
NIA7_HORVU1.016e-3339.44Nitrate reductase [NAD(P)H] OS=Hordeum vulgare GN=... [more]
NIA2_SOYBN1.733e-3338.28Inducible nitrate reductase [NADH] 2 OS=Glycine ma... [more]
NIA2_BRANA3.860e-3337.80Nitrate reductase [NADH], clone PBNBR1412 OS=Brass... [more]
NIA_CICIN5.042e-3336.15Nitrate reductase [NADH] OS=Cichorium intybus GN=N... [more]
NIA1_ORYSJ6.585e-3336.62Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. ... [more]
NIA_PETHY8.600e-3336.49Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA... [more]
NIA_PICAN1.467e-3237.50Nitrate reductase [NADPH] OS=Pichia angusta GN=YNR... [more]
NIA_LOTJA5.574e-3238.57Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA... [more]
NIA_SOLLC7.280e-3235.41Nitrate reductase [NADH] OS=Solanum lycopersicum G... [more]
NIA_FUSOX9.508e-3235.68Nitrate reductase [NADPH] OS=Fusarium oxysporum GN... [more]

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Properties
Property NameValue
Genbank descriptionC31004C04EF AbioticL1 Citrus clementina cDNA clone C31004C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868742 ID=FC868742; Name=FC868742; organism=Citrus clementina; type=EST; length=740bp
GGCATACTTAAGAAAGCTTTCGACTCCAGTGAAGGAGAGAAGAAGAAGCT
TCGACTATGCCGGGACTAACAGCACCATCAAGTTACTCTCAAGAGCCGCC
TCGTCATCCTATCCTTCAAATTAATTCCAAGGAACCATTCAATGCGGAGC
CGCCGCGGTCGGCCTTGATTTCATCTTACGTGACGCCTGTTGATTTTTTC
TACAAGAGAAATCATGGCCCAATTCCGATAGTTGATGATATTGAAAGCTA
TTATGTCTCAATATGTGGTTTAATTGAAAATTCCAAAGACCTGTTTATGA
GGGATATTCGGATGCTCCCAAAATACAACATCACTGCCACTTTGCAGTGT
GCGGGTAACCGAAGGACAGCGATGAGCAATGTCAGAACGGTGAAGGGAGT
TGGCTGGGATGTTTCTGCTATAGGAAATGCTGTCTGGAGTGGTGCCAAAT
TGGCTGATGTTCTTGAACTGGTTGGGATACCAAACTTGACAAGTGTCACT
AGGTCAGGTGGAAAACATGTTGAATTTGTAAGCATTGACAAGTGTAAGGA
GGAGAATGGGGGTCCATATAAAGCATCAATTCCACTTAGTCAAGCTACAA
ACCCAGAAGCTGATGTTTTACTTGCGTATGAGATGAATGGAGAGCCTCTT
AATAGAGATCATGGTTATCCTCTTCGGGTAGTTGTACCGGGTGGTATAGG
TGCTCGTTCTGTCAAATGGTTGGATACCATCACATCCTTG
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