FC868742

Overview
NameFC868742
Unique NameFC868742
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA3_MAIZE (Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.508e-32
Identity = 81/211 (38.39%), Postives = 114/211 (54.03%), Query Frame = 3
Query:  111 ILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDI-RMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGG---PYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            ++++  K   N E PR  +   ++TPV   Y RNHGP+P   D  ++ V + GL+   + L M ++ R  P   +  TL CAGNRR   + VR   G  W   A+  +VW GA+L+DVL   G     S++R GG    FV  +  ++  GG    Y  SI    A +P  DV+LAY+ NG PL  DHG+P+R++VPG    R VKWL  I
Sbjct:  103 LIRLTGKHSLNGELPR-LMRHGFITPVPRHYVRNHGPVPR-GDWATWTVEVTGLVRRPRALTMDELARDFPALELPVTLVCAGNRRKEQNMVRQTLGFNWGPGAVSTSVWRGARLSDVLRRCG-----SMSRKGG--ALFVCFEGAEDLPGGGGTKYGTSITREVALDPTMDVMLAYQQNGGPLLPDHGFPVRLIVPGCTAGRMVKWLKRI 304          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_NEUCR (Nitrate reductase [NADPH] OS=Neurospora crassa GN=nit-3 PE=1 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 1.242e-31
Identity = 78/224 (34.82%), Postives = 122/224 (54.46%), Query Frame = 3
Query:  111 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIV-------------DDIESYYVSICGLIENSKDLFMRDIRMLPKY-NIT--ATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            ++++    PFN EPP +AL    ++TP +  Y RNHGPIP               D + ++  ++ GL+E+   + +R++    K+ N+T   TL CAGNRR   + +R  KG  W    +  A+W+G  L+++L          +T+ GG    +V  +   +   G Y  S+ L+ A +P   +++A++MNGE L+ DHG P+RVVVPG IG RSVKWL  I
Sbjct:  144 LIRLTGSHPFNVEPPLTALFEHGFLTPQNLHYVRNHGPIPSSVATPPATINKEEDDSLLNWEFTVEGLVEHPLKISVRELMDASKWDNVTYPVTLVCAGNRRKEQNVLRKSKGFSWGAGGLSTALWTGVGLSEILA-----RAKPLTKKGGG-ARYVCFEGADQLPNGTYGTSVKLAWAMDPNKGIMVAHKMNGENLHPDHGRPVRVVVPGQIGGRSVKWLKRI 361          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA1_HORVU (Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.622e-31
Identity = 76/213 (35.68%), Postives = 112/213 (52.58%), Query Frame = 3
Query:  102 RHP-ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRM-LPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            R+P ++++  K P N EPP + L+   ++TP    Y RNHG +P   D  ++ V + GL+     L M ++    P   + ATL CAGNRR   + V+   G  W  + +  +VW GA+L DVL   G+ +     +    +V F   +      G  Y  S+    A +P  D++L Y  NGEPL  DHGYP+RV++PG IG R VKW+  I
Sbjct:  105 RNPSLIRLTGKHPLNCEPPLARLMHHGFITPAPLHYVRNHGAVPR-GDWATWTVEVTGLVRRPARLTMDELANGFPAAEVPATLVCAGNRRKEQNMVQQTVGFNWGAAGVSTSVWRGARLRDVLLRCGVMS----KKGQALNVCFEGAEDLPGGGGSKYGTSVSREWAMDPSRDIILPYAQNGEPLLPDHGYPVRVLIPGCIGGRMVKWVRRI 312          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA1_BRANA (Nitrate reductase [NADH], clone PBNBR1405 OS=Brassica napus GN=NIA1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.118e-31
Identity = 76/209 (36.36%), Postives = 107/209 (51.20%), Query Frame = 3
Query:  111 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            ++++  K PFNAE P   L+   ++TPV   Y RNHG +P  +    + V + GL++    L M   I   P      TL CAGNRR   + V+   G  W  + +  ++W G  L+DVL   G+ +     R G  +V F   +      G  Y  SI    A +P  D++LAY  NGE L  DHG+P+RV++PG IG R VKWL  I
Sbjct:  111 MVRLTGKHPFNAEAPLPRLMHHGFITPVPLHYVRNHGGVPKAE-WSDWSVEVTGLVKRPAGLTMEQLISEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGSAGVSTSLWRGVALSDVLRRCGVYS----KRGGALNVCFEGAEDLPGGGGSKYGTSIKKEMAMDPARDIILAYMQNGELLTPDHGFPVRVIIPGFIGGRMVKWLKRI 314          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA2_HORVU (Nitrate reductase [NADH] (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.766e-31
Identity = 76/213 (35.68%), Postives = 112/213 (52.58%), Query Frame = 3
Query:  102 RHP-ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRM-LPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            R+P ++++  K P N EPP + L+   ++TP    Y RNHG +P   D  ++ V + GL+     L M ++    P   + ATL CAGNRR   + V+   G  W  + +  +VW GA+L DVL   G+ +     +    +V F   +      G  Y  S+    A +P  D++L Y  NGEPL  DHGYP+RV++PG IG R VKW+  I
Sbjct:  102 RNPSLIRLTGKHPLNCEPPLARLMHHGFITPAPLHYVRNHGAVPR-GDWATWTVEVTGLVRRPARLTMDELANGFPAAEVPATLVCAGNRRKEQNMVQQTVGFNWGAAGVSTSVWRGARLRDVLLRCGVMS----KKGQALNVCFEGAEDLPGGGGSKYGTSMSREWAMDPSRDIILPYAQNGEPLLPDHGYPVRVLIPGCIGGRMVKWVRRI 309          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA1_PHAVU (Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris GN=NIA1 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.766e-31
Identity = 84/249 (33.73%), Postives = 118/249 (47.39%), Query Frame = 3
Query:   39 EEEASTMPGLTAPSSYSQEP----PRHP------------ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            +EEA+    L   SS   EP    PR              ++++  K PFNAEPP   L+   ++TP    Y R+HGP+P     E + V + GL+       M   +   P +   ATL CAGNRR   + V+   G  W    +  +VW G  L  +L+  GI +       G  HV F   +      G  Y  S+    A +P  D++LAY  NGE L+ DHG+P+R+++PG IG R VKWL  I
Sbjct:   47 DEEAAVWKELVLKSSAGVEPSIFDPRDDGTSDQWIKRNASMIRLTGKHPFNAEPPLPRLMQHGFITPSPIHYVRSHGPVPHAR-WEDWTVEVTGLVTRPTCFTMEQLVNDFPSHEFPATLVCAGNRRKEQNMVKQSIGFNWGAGGVSTSVWRGVSLRSLLKRCGIYSRAK----GALHVCFEGAEDLPGGGGSNYGTSLMREVALDPSRDIILAYMQNGELLSPDHGFPVRMIIPGFIGGRMVKWLKRI 290          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA1_ARATH (Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana GN=NIA1 PE=1 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 3.613e-31
Identity = 76/209 (36.36%), Postives = 107/209 (51.20%), Query Frame = 3
Query:  111 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            +L++  K PFNAE P   L+   ++TPV   Y RNHG +P  +    + + I GL++      M + I   P      TL CAGNRR   + V+   G  W  + +  ++W G  L+++L   GI +     R G  +V F   +      G  Y  SI    A +P  D++LAY  NGE L  DHG+P+RV+VPG IG R VKWL  I
Sbjct:  117 MLRLTGKHPFNAEAPLPRLMHHGFITPVPLHYVRNHGAVPKAN-WSDWSIEITGLVKRPAKFTMEELISEFPSREFPVTLVCAGNRRKEQNMVKQTIGFNWGSAGVSTSLWKGIPLSEILRRCGIYS----RRGGALNVCFEGAEDLPGGGGSKYGTSIKKEMAMDPARDIILAYMQNGELLTPDHGFPVRVIVPGFIGGRMVKWLKRI 320          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_SPIOL (Nitrate reductase [NADH] OS=Spinacia oleracea GN=NIA PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.719e-31
Identity = 77/216 (35.65%), Postives = 115/216 (53.24%), Query Frame = 3
Query:  102 RHP-ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIEN----SKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            R+P ++++  K PFN+EPP + L+   ++TPV   Y RNHGP+P     E + V + GL++     + D  + D +         TL CAGNRR   +  +   G  W  +A+  +VW G  L DVL+  G+ +    +  G  +V F   +      G  Y  S+    A +P  D++LAY  NGE L+ DHGYP+R+++PG IG R VKWL  I
Sbjct:  120 RNPSMIRLTGKHPFNSEPPLTRLMHHGFLTPVPLHYVRNHGPVPNAK-WEDWTVEVTGLVKRPIRFTMDQLVNDFQ---SREFPVTLVCAGNRRKEQNMTKQSIGFNWGSAAVSTSVWRGVPLRDVLKRCGVMS----SLKGALNVCFEGAEDLPGGGGSKYGTSVKREFAMDPARDIILAYMQNGEKLSPDHGYPVRMIIPGFIGGRMVKWLKRI 327          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.163e-31
Identity = 72/209 (34.45%), Postives = 108/209 (51.67%), Query Frame = 3
Query:  111 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            ++++  K PFN+EPP + L+   ++TPV   Y RNHGP+P     + + V + GL++      M   +   P   +  TL CAGNRR   + V+   G  W  +A+   VW G  L  +L+  G+ +       G  +V F   D      G  Y  SI    A +P  D+++AY  NGE L  DHG+P+R+++PG IG R VKW+  I
Sbjct:  103 LIRLTGKHPFNSEPPLNRLMHHGFITPVPLHYVRNHGPVP-KGTWDDWTVEVTGLVKRPMKFTMDQLVNEFPSRELPVTLVCAGNRRKEQNMVKQTIGFNWGAAAVSTTVWRGVPLRALLKRYGVFS----KNKGALNVCFEGADVLPGGGGSKYGTSIKKEFAMDPARDIIIAYMQNGEKLAPDHGFPVRMIIPGFIGGRMVKWIKRI 306          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA1_SOYBN (Inducible nitrate reductase [NADH] 1 OS=Glycine max GN=INR1 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.163e-31
Identity = 79/233 (33.91%), Postives = 113/233 (48.50%), Query Frame = 3
Query:   39 EEEASTMPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDI-RMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            E EAS +      ++    P    +++   K PFN E P   L+   ++TP    Y RNHGP+P +   + + V + GL++ S    M  + R  P     ATL CAGNRR   + V+   G  W  +    +VW G  L  VL+  GI         G  +V F   +      G  Y  S+    A +P  D++LA+  NGEPL  DHG+P+R+++PG IG R VKWL  I
Sbjct:   61 ETEASLLDPRDEGTADQWIPRNASMVRFTGKHPFNGEGPLPRLMHHGFITPSPLRYVRNHGPVPKIK-WDEWTVEVTGLVKRSTHFTMEKLMREFPHREFPATLVCAGNRRKEHNMVKQSIGFNWGAAGGSTSVWRGVPLRHVLKRCGI----LARMKGAMYVSFEGAEDLPGGGGSKYGTSVKREMAMDPSRDIILAFMQNGEPLAPDHGFPVRMIIPGFIGGRMVKWLKRI 288          
The following BLAST results are available for this feature:
BLAST of FC868742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
NIA3_MAIZE9.508e-3238.39Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1[more]
NIA_NEUCR1.242e-3134.82Nitrate reductase [NADPH] OS=Neurospora crassa GN=... [more]
NIA1_HORVU1.622e-3135.68Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 S... [more]
NIA1_BRANA2.118e-3136.36Nitrate reductase [NADH], clone PBNBR1405 OS=Brass... [more]
NIA2_HORVU2.766e-3135.68Nitrate reductase [NADH] (Fragment) OS=Hordeum vul... [more]
NIA1_PHAVU2.766e-3133.73Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris G... [more]
NIA1_ARATH3.613e-3136.36Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana... [more]
NIA_SPIOL4.719e-3135.65Nitrate reductase [NADH] OS=Spinacia oleracea GN=N... [more]
NIA1_TOBAC6.163e-3134.45Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN... [more]
NIA1_SOYBN6.163e-3133.91Inducible nitrate reductase [NADH] 1 OS=Glycine ma... [more]

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Properties
Property NameValue
Genbank descriptionC31004C04EF AbioticL1 Citrus clementina cDNA clone C31004C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868742 ID=FC868742; Name=FC868742; organism=Citrus clementina; type=EST; length=740bp
GGCATACTTAAGAAAGCTTTCGACTCCAGTGAAGGAGAGAAGAAGAAGCT
TCGACTATGCCGGGACTAACAGCACCATCAAGTTACTCTCAAGAGCCGCC
TCGTCATCCTATCCTTCAAATTAATTCCAAGGAACCATTCAATGCGGAGC
CGCCGCGGTCGGCCTTGATTTCATCTTACGTGACGCCTGTTGATTTTTTC
TACAAGAGAAATCATGGCCCAATTCCGATAGTTGATGATATTGAAAGCTA
TTATGTCTCAATATGTGGTTTAATTGAAAATTCCAAAGACCTGTTTATGA
GGGATATTCGGATGCTCCCAAAATACAACATCACTGCCACTTTGCAGTGT
GCGGGTAACCGAAGGACAGCGATGAGCAATGTCAGAACGGTGAAGGGAGT
TGGCTGGGATGTTTCTGCTATAGGAAATGCTGTCTGGAGTGGTGCCAAAT
TGGCTGATGTTCTTGAACTGGTTGGGATACCAAACTTGACAAGTGTCACT
AGGTCAGGTGGAAAACATGTTGAATTTGTAAGCATTGACAAGTGTAAGGA
GGAGAATGGGGGTCCATATAAAGCATCAATTCCACTTAGTCAAGCTACAA
ACCCAGAAGCTGATGTTTTACTTGCGTATGAGATGAATGGAGAGCCTCTT
AATAGAGATCATGGTTATCCTCTTCGGGTAGTTGTACCGGGTGGTATAGG
TGCTCGTTCTGTCAAATGGTTGGATACCATCACATCCTTG
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