FC868742

Overview
NameFC868742
Unique NameFC868742
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_USTMA (Nitrate reductase [NADPH] OS=Ustilago maydis GN=NAR1 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.051e-30
Identity = 85/258 (32.95%), Postives = 132/258 (51.16%), Query Frame = 3
Query:   27 Q*RREEEASTMPGLTA-----PSSYSQEPPRHPI------LQINSKEPFNAEPPRSALISS-YVTPVDFFYKRNHGPIPIV--DDIESYYVSICGLIENSKDLFMRDIR-MLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLE--------LVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            Q R++   + +P + A     P +     P H I      +++  K PFN+E P S L S  ++TP + FY R+HG  P V  +  E++ + + GL+E   +L ++D++   P   +  TL CAGNRR   + V    G  W  + +   +++G  LAD+L+        L   P+         +HV F   D+  +   G Y  S  L+ A +    +L+A+ +NGE L+ DHGYPLR+VVPG IG R VKWL+ I
Sbjct:   62 QPRKDYNENVLPAIPATEAVQPLTSDANTPDHWIARDERMIRLTGKHPFNSEAPLSELFSKGFLTPQNLFYVRSHGDTPRVTREQAENWKLKVHGLVEQEVELSIKDLKEKFPTVTLPITLVCAGNRRKEQNMVAKGLGFNWGAAGVSTGLFTGVYLADILDYCKPKNPLLSSFPSYDVAVPGRARHVVFEGADELPK---GKYGTSQRLNWALDRCKGMLIAWGLNGEDLSPDHGYPLRLVVPGQIGGRMVKWLERI 316          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_BETVE (Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN=NIA1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.342e-30
Identity = 73/209 (34.93%), Postives = 107/209 (51.20%), Query Frame = 3
Query:  111 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFM-RDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            ++++  K PFN+E P + L+   ++TP    Y RNHGP+P     E + V +CGL++      M R +          TL CAGNRR   + V+   G  W  + +  +VW G  L DVL+  GI +       G  +V F   +      G  Y  S+    A +P  D++L Y  NGE L+ DHG+P+R+++PG IG R VKWL  I
Sbjct:  100 MVRLTGKHPFNSEAPLTRLMHHGFITPAPLHYVRNHGPVPKAR-WEDWSVEVCGLVKRPARFTMDRLVTEFRSREFPVTLVCAGNRRKEQNMVKKTIGFNWGAAGVSTSVWRGVPLRDVLKRCGIFS----RGRGAFNVCFEGAEDLPGGGGSKYGTSVKYEMAMDPARDIILGYMQNGERLSPDHGFPVRMIIPGFIGGRMVKWLKRI 303          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA2_TOBAC (Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN=NIA2 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.059e-30
Identity = 71/209 (33.97%), Postives = 108/209 (51.67%), Query Frame = 3
Query:  111 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            ++++  K PFN+EPP + L+   ++TPV   Y RNHGP+P     + + V + GL++      M   +   P   +  TL CAGNRR   + V+   G  W  +A+   +W G  L  +L+  G+ +       G  +V F   D      G  Y  SI    A +P  D+++AY  NGE L  DHG+P+R+++PG IG R VKW+  I
Sbjct:  103 MIRLTGKHPFNSEPPLNRLMHHGFITPVPLHYVRNHGPVP-KGTWDDWTVEVTGLVKRPMKFTMDQLVNEFPCRELPVTLVCAGNRRKEQNMVKQTIGFNWGAAAVSTTIWRGVPLRALLKRCGVFS----KNKGALNVCFEGADVLPGGGGSKYGTSIKKEFAMDPARDIIVAYMQNGEKLAPDHGFPVRMIIPGFIGGRMVKWIKRI 306          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_LEPMC (Nitrate reductase [NADPH] OS=Leptosphaeria maculans GN=NIAD PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 6.814e-30
Identity = 79/215 (36.74%), Postives = 120/215 (55.81%), Query Frame = 3
Query:   99 PRHP-ILQINSKEPFNAEPPRSALISS-YVTPVDFFYKRNHGPIPIVDDIE--SYYVSICGLIENSKDLFMRDIRMLPKY-NIT--ATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWL 722
            PR P ++++    PFN EPP + L +  ++T  + FY RNHG +P V D E   +  SI G++ N   + +R  ++L +Y N+T   TL CAGNRR   + VR  KG  W  + +  A+++G  + DV+E               +  ++V ++   +   G Y  S+ L+   +P   ++LA++MNGE L+ DHG PLR VVPG IG RSVKWL
Sbjct:   82 PRDPRLIRLTGVHPFNTEPPLTDLYNEGFLTSPELFYVRNHGAVPEVQDEECLDWEFSIEGMVANPLKITLR--QLLEEYENVTYPVTLVCAGNRRKEQNVVRKSKGFAWGAAGVSTALFTGVVMKDVIERA----------KPLRKAKYVCMEGADKLPNGYYGTSVKLNWVMDPNRGIMLAHKMNGENLSLDHGKPLRAVVPGQIGGRSVKWL 284          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_CUCMA (Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.814e-30
Identity = 73/209 (34.93%), Postives = 110/209 (52.63%), Query Frame = 3
Query:  111 ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLPKYN-ITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            ++++  K PFN+EPP + L+   ++TPV   Y RNHG +P     + + V +CGL++      M  +    ++    ATL CAGNRR   + V+   G  W  + +  +VW    L D+L+  GI +     + G  +V F   +      G  Y  SI    A +P  D++LAY  NGE L  DHG+P+R+++PG IG R VKWL  I
Sbjct:  115 MVRLTGKHPFNSEPPLNRLMHHGFITPVPLHYVRNHGVVPKAKWAD-WTVEVCGLVKRPAKFTMDQLLNEFRFREFPATLVCAGNRRKEQNMVKQSIGFNWGAAGVSTSVWRRVPLCDLLKRCGILS----RKKGALNVCFEGAEDLPGGGGSKYGTSIKKELAMDPARDIILAYMQNGEQLAPDHGFPVRMIIPGFIGGRMVKWLKRI 318          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_VOLCA (Nitrate reductase [NADH] OS=Volvox carteri GN=NITA PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.899e-30
Identity = 77/225 (34.22%), Postives = 116/225 (51.56%), Query Frame = 3
Query:   75 PSSYSQEPPRHPILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEE----NGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTIT 734
            P ++ +  PR  IL++  + P N EPP   L+   ++TP    + RNHG  P +   E + + I GL++    L M ++  LP      TL CAGNRR   + ++   G  W   A     W+G +L D+L L GI       +S  +   FV     K E    + G Y  S+  ++A +P +DV++AY+ N   L  DHG+P+R+++PG IG R VKWL  IT
Sbjct:   50 PDNWVRRDPR--ILRLTGRHPLNCEPPMDVLMEYGFITPPAVHFVRNHGAAPRIPWAE-HRIEINGLVDKPLFLTMDELVALPSITFPCTLVCAGNRRKEENMLKKSIGFNWGPCATSTTYWTGVRLRDLLLLAGI-------KSPEQGANFVCFRGPKGELPRGSDGSYGTSLTYAKAMDPSSDVIIAYKQNHRWLTPDHGFPVRMIIPGFIGGRMVKWLSEIT 264          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_BEABA (Nitrate reductase [NADPH] OS=Beauveria bassiana GN=NIA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.983e-29
Identity = 75/227 (33.04%), Postives = 118/227 (51.98%), Query Frame = 3
Query:   66 LTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISS-YVTPVDFFYKRNHGPIPIVDDIES--YYVSICGLIENSKDLFMRD-IRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTIT 734
            L  P       PR  ++++    PFN EPP + L    ++   +  Y RNHGP+P   D ES  +  ++ GL+E    + +RD I+   ++    TL CAGNRR   + VR  KG  W  + +  A+W+G  +  +L +       +  +   K+V F   DK      G Y  S+ L+   +    +++A++MNG+ L+ DHG P+R+++PG IG RSVKWL  IT
Sbjct:   73 LKTPDHRVNRDPR--LIRLTGVHPFNVEPPLTDLYDEGFLNSENLHYVRNHGPVPHCPDDESLNWTFTVDGLVEKPFTIAVRDLIQKYDQFTYPVTLVCAGNRRKEQNVVRKSKGFSWGAAGLSTALWTGVPIGALLRM-------AKPKRAAKYVCFEGADKLPN---GYYGTSVKLNWCMDENRGIMVAHKMNGQSLHPDHGKPVRIIIPGQIGGRSVKWLKKIT 287          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA2_ARATH (Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana GN=NIA2 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.382e-29
Identity = 84/248 (33.87%), Postives = 122/248 (49.19%), Query Frame = 3
Query:   36 REEEASTMPGLTAP-SSYSQEP--PRHP-ILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLPKYN-ITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEEN----------GGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            R+  A   P +  P   Y+ +    R+P ++++  K PFN+E P + L+   ++TPV   Y RNHG +P     E + V + G ++      M  +     Y    ATL CAGNRR   + V+  KG  W  + +  +VW G  L DVL   GI      +R GG      +++ C E +          G  Y  SI    A +P  D++LAY  NGE L  DHG+P+R+++PG IG R VKWL  I
Sbjct:   82 RKSNAELEPSVLDPRDEYTADSWIERNPSMVRLTGKHPFNSEAPLNRLMHHGFITPVPLHYVRNHGHVPKAQWAE-WTVEVTGFVKRPMKFTMDQLVSEFAYREFAATLVCAGNRRKEQNMVKKSKGFNWGSAGVSTSVWRGVPLCDVLRRCGI-----FSRKGG------ALNVCFEGSEDLPGGAGTAGSKYGTSIKKEYAMDPSRDIILAYMQNGEYLTPDHGFPVRIIIPGFIGGRMVKWLKRI 317          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_PHYIN (Nitrate reductase [NADPH] OS=Phytophthora infestans GN=NIAA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.768e-29
Identity = 75/215 (34.88%), Postives = 116/215 (53.95%), Query Frame = 3
Query:   99 PRHP-ILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD-IRMLPKYNIT--ATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            PRHP ++++  + PFN+EPP     S+++TP+   Y RNHGP+P ++  +++  SI GL++  +   M + +    +  +T    L CAGNRR   + ++   G  W  +    A W+G  L  +L   G      V R   + V F  I+    +    Y   I  S   +PE DVL+A++ NGE L  DHG+P+R++VPG IG R VKWL+ I
Sbjct:   97 PRHPELIRLTGRHPFNSEPPLK-YASTFITPMALHYVRNHGPVPRLE-WDTHTFSIDGLVKKPRTFGMNELVTTFEQETVTFPVLLVCAGNRRKEQNMIKKTIGFSWGAAGCSTAEWTGVPLHVLLTACG------VDREKAQWVWFEGIEDLPHDK---YGTCIRASTELDPECDVLVAWKANGELLGPDHGFPVRLIVPGHIGGRMVKWLERI 300          
The following BLAST results are available for this feature:
BLAST of FC868742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
NIA_USTMA1.051e-3032.95Nitrate reductase [NADPH] OS=Ustilago maydis GN=NA... [more]
NIA_BETVE2.342e-3034.93Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN... [more]
NIA2_TOBAC3.059e-3033.97Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN... [more]
NIA_LEPMC6.814e-3036.74Nitrate reductase [NADPH] OS=Leptosphaeria maculan... [more]
NIA_CUCMA6.814e-3034.93Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 ... [more]
NIA_VOLCA8.899e-3034.22Nitrate reductase [NADH] OS=Volvox carteri GN=NITA... [more]
NIA_BEABA1.983e-2933.04Nitrate reductase [NADPH] OS=Beauveria bassiana GN... [more]
NIA2_ARATH3.382e-2933.87Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana... [more]
NIA_PHYIN5.768e-2934.88Nitrate reductase [NADPH] OS=Phytophthora infestan... [more]

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Properties
Property NameValue
Genbank descriptionC31004C04EF AbioticL1 Citrus clementina cDNA clone C31004C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868742 ID=FC868742; Name=FC868742; organism=Citrus clementina; type=EST; length=740bp
GGCATACTTAAGAAAGCTTTCGACTCCAGTGAAGGAGAGAAGAAGAAGCT
TCGACTATGCCGGGACTAACAGCACCATCAAGTTACTCTCAAGAGCCGCC
TCGTCATCCTATCCTTCAAATTAATTCCAAGGAACCATTCAATGCGGAGC
CGCCGCGGTCGGCCTTGATTTCATCTTACGTGACGCCTGTTGATTTTTTC
TACAAGAGAAATCATGGCCCAATTCCGATAGTTGATGATATTGAAAGCTA
TTATGTCTCAATATGTGGTTTAATTGAAAATTCCAAAGACCTGTTTATGA
GGGATATTCGGATGCTCCCAAAATACAACATCACTGCCACTTTGCAGTGT
GCGGGTAACCGAAGGACAGCGATGAGCAATGTCAGAACGGTGAAGGGAGT
TGGCTGGGATGTTTCTGCTATAGGAAATGCTGTCTGGAGTGGTGCCAAAT
TGGCTGATGTTCTTGAACTGGTTGGGATACCAAACTTGACAAGTGTCACT
AGGTCAGGTGGAAAACATGTTGAATTTGTAAGCATTGACAAGTGTAAGGA
GGAGAATGGGGGTCCATATAAAGCATCAATTCCACTTAGTCAAGCTACAA
ACCCAGAAGCTGATGTTTTACTTGCGTATGAGATGAATGGAGAGCCTCTT
AATAGAGATCATGGTTATCCTCTTCGGGTAGTTGTACCGGGTGGTATAGG
TGCTCGTTCTGTCAAATGGTTGGATACCATCACATCCTTG
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