FC868743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURCM (Homogentisate 1,2-dioxygenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=hmgA PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.379e-61 Identity = 115/202 (56.93%), Postives = 149/202 (73.76%), Query Frame = 2 Query: 104 YESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 Y SGF N F++EA+ GALP G NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P +LVSEF S T P QLRW P+ +P PTDF++GL T+ G GS+ +G AIH+Y N+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RF+V+LPDG +RGYI E FG Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPFTGPQ-RLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVEGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFSVALPDGDARGYICENFG 213
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_DICDI (Homogentisate 1,2-dioxygenase OS=Dictyostelium discoideum GN=hgd PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 6.079e-60 Identity = 116/207 (56.04%), Postives = 146/207 (70.53%), Query Frame = 2 Query: 95 DLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDI-PDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHF 712 D Y+SGFGNSF SEAI G LP+G N+P CP LYAEQ+SG +FT+PR QRSWLYRI+PS H P K P LV D +N + P QLRWKP I D P DF++GL TI GAG + +RHG AIH+YT KSM+N +F N+DGDFL+VPQ+G L I TE G ++V GEI V+ +G F+V++ +GP+RGYI E+FG+HF Sbjct: 7 DYEYQSGFGNSFESEAIKGTLPKGRNAPQNCPLDLYAEQLSGNAFTAPRHTQQRSWLYRIRPSVCHTPLK---PIDSGLVC--DLNNLHVDPNQLRWKPFPITEDKPHDFVEGLITIAGAGHASVRHGLAIHIYTATKSMENKSFYNSDGDFLIVPQQGTLDIQTEFGFMKVKSGEICVIQRGITFSVNV-EGPTRGYICEVFGSHF 207
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURPS (Homogentisate 1,2-dioxygenase OS=Burkholderia pseudomallei GN=hmgA PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.017e-59 Identity = 114/211 (54.03%), Postives = 149/211 (70.62%), Query Frame = 2 Query: 86 DFS---DLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 DFS + Y+SGF N F++EA+ GALP NSP P+GLYAEQ SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V+EF S+ T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y N+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RGY+ E FG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQFSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVAEFGDSDDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARGYVCENFG 219
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURP1 (Homogentisate 1,2-dioxygenase OS=Burkholderia pseudomallei (strain 1710b) GN=hmgA PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.017e-59 Identity = 114/211 (54.03%), Postives = 149/211 (70.62%), Query Frame = 2 Query: 86 DFS---DLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 DFS + Y+SGF N F++EA+ GALP NSP P+GLYAEQ SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V+EF S+ T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y N+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RGY+ E FG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQFSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVAEFGDSDDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARGYVCENFG 219
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURP0 (Homogentisate 1,2-dioxygenase OS=Burkholderia pseudomallei (strain 1106a) GN=hmgA PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.017e-59 Identity = 114/211 (54.03%), Postives = 149/211 (70.62%), Query Frame = 2 Query: 86 DFS---DLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 DFS + Y+SGF N F++EA+ GALP NSP P+GLYAEQ SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V+EF S+ T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y N+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RGY+ E FG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQFSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVAEFGDSDDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARGYVCENFG 219
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURMS (Homogentisate 1,2-dioxygenase OS=Burkholderia mallei (strain SAVP1) GN=hmgA PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.017e-59 Identity = 114/211 (54.03%), Postives = 149/211 (70.62%), Query Frame = 2 Query: 86 DFS---DLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 DFS + Y+SGF N F++EA+ GALP NSP P+GLYAEQ SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V+EF S+ T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y N+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RGY+ E FG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQFSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVAEFGDSDDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARGYVCENFG 219
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURMA (Homogentisate 1,2-dioxygenase OS=Burkholderia mallei GN=hmgA PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.017e-59 Identity = 114/211 (54.03%), Postives = 149/211 (70.62%), Query Frame = 2 Query: 86 DFS---DLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 DFS + Y+SGF N F++EA+ GALP NSP P+GLYAEQ SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V+EF S+ T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y N+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RGY+ E FG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQFSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVAEFGDSDDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARGYVCENFG 219
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURM9 (Homogentisate 1,2-dioxygenase OS=Burkholderia mallei (strain NCTC 10229) GN=hmgA PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.017e-59 Identity = 114/211 (54.03%), Postives = 149/211 (70.62%), Query Frame = 2 Query: 86 DFS---DLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 DFS + Y+SGF N F++EA+ GALP NSP P+GLYAEQ SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V+EF S+ T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y N+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RGY+ E FG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQFSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVAEFGDSDDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARGYVCENFG 219
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURM7 (Homogentisate 1,2-dioxygenase OS=Burkholderia mallei (strain NCTC 10247) GN=hmgA PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.017e-59 Identity = 114/211 (54.03%), Postives = 149/211 (70.62%), Query Frame = 2 Query: 86 DFS---DLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 DFS + Y+SGF N F++EA+ GALP NSP P+GLYAEQ SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V+EF S+ T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y N+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RGY+ E FG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQFSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVAEFGDSDDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARGYVCENFG 219
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURTA (Homogentisate 1,2-dioxygenase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=hmgA PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.147e-59 Identity = 113/211 (53.55%), Postives = 149/211 (70.62%), Query Frame = 2 Query: 86 DFS---DLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 DFS + Y+SGF N F++EA+ GALP NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+ V ++V++F S T P QLRW P+ +P PTDF+DG T+ G GS+ G AIH+Y N+SM F +ADG+ L+VPQ+GRL+I TE G+L+V P EIAV+P+G RFAV+LPDG +RGY+ E FG Sbjct: 10 DFSKPGEAGYQSGFANEFATEALPGALPHARNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFE-LVSGERRIVADFGDSGDVPPTPPNQLRWDPLPMPAQPTDFVDGWVTMAGNGSAAAMSGCAIHLYAANRSMRERFFYSADGELLIVPQEGRLFIMTELGRLDVEPFEIAVIPRGVRFAVALPDGRARGYVCENFG 219 The following BLAST results are available for this feature:
BLAST of FC868743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868743 ID=FC868743; Name=FC868743; organism=Citrus clementina; type=EST; length=724bpback to top |