FC868743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_XANOP (Homogentisate 1,2-dioxygenase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=hmgA PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.149e-50 Identity = 100/201 (49.75%), Postives = 133/201 (66.17%), Query Frame = 2 Query: 101 NYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 +Y +GFGN F++EA+ G+LP G NSP GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H F + +L ++F P Q+RW P+ +P +PTDF+DGLYT+ G GS G A+H+Y N SM F NADG+ L+VPQ GRL + TE G LE+ P +I V+P+G RF V L D +RGY+ E FG Sbjct: 6 HYMTGFGNEFATEAVAGSLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRIRPAAVHGRFS--LIEQSRLHNDF--GGGPVPPDQMRWSPLPLPATPTDFVDGLYTMAGNGSPEAMTGVAVHLYAANASMHGRFFYNADGELLLVPQLGRLRVCTELGVLELEPQQIGVIPRGVRFRVELLDSAARGYVCENFG 202
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_XANOM (Homogentisate 1,2-dioxygenase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=hmgA PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.149e-50 Identity = 100/201 (49.75%), Postives = 133/201 (66.17%), Query Frame = 2 Query: 101 NYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 +Y +GFGN F++EA+ G+LP G NSP GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H F + +L ++F P Q+RW P+ +P +PTDF+DGLYT+ G GS G A+H+Y N SM F NADG+ L+VPQ GRL + TE G LE+ P +I V+P+G RF V L D +RGY+ E FG Sbjct: 6 HYMTGFGNEFATEAVAGSLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRIRPAAVHGRFS--LIEQSRLHNDF--GGGPVPPDQMRWSPLPLPATPTDFVDGLYTMAGNGSPEAMTGVAVHLYAANASMHGRFFYNADGELLLVPQLGRLRVCTELGVLELEPQQIGVIPRGVRFRVELLDSAARGYVCENFG 202
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_XANOR (Homogentisate 1,2-dioxygenase OS=Xanthomonas oryzae pv. oryzae GN=hmgA PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.501e-50 Identity = 99/201 (49.25%), Postives = 133/201 (66.17%), Query Frame = 2 Query: 101 NYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 +Y +GFGN F++EA+ G+LP G NSP GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H F + +L ++F P Q+RW P+ +P +PTDF+DGLYT+ G GS G A+H+Y N SM F NADG+ L+VPQ GRL + TE G LE+ P ++ V+P+G RF V L D +RGY+ E FG Sbjct: 6 HYMTGFGNEFATEAVAGSLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRIRPAAVHGRFS--LIEQSRLHNDF--GGGPVPPDQMRWSPLPLPATPTDFVDGLYTMAGNGSPEAMTGVAVHLYAANASMHGRFFYNADGELLLVPQLGRLRVCTELGVLELEPQQVGVIPRGVRFRVELLDSAARGYVCENFG 202
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_XANC5 (Homogentisate 1,2-dioxygenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=hmgA PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.729e-50 Identity = 99/201 (49.25%), Postives = 133/201 (66.17%), Query Frame = 2 Query: 101 NYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 +Y +GFGN F++EA+ G+LP G NSP GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H F + +L ++F P Q+RW P+ +P + TDF+DGLYT+ G GS G A+H+Y N SM + F NADG+ L+VPQ GRL + TE G LE+ P +I V+P+G RF V L D +RGY+ E FG Sbjct: 8 SYMTGFGNEFATEAVAGSLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRIRPAAVHGRFS--LIEQSRLHNDF--GGGPVPPDQMRWSPLPLPATRTDFVDGLYTMAGNGSPEAMTGVAVHLYAANASMRDRFFYNADGELLLVPQLGRLRVCTELGVLELEPQQIGVIPRGLRFRVELLDSEARGYVCENFG 204
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_XANAC (Homogentisate 1,2-dioxygenase OS=Xanthomonas axonopodis pv. citri GN=hmgA PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.659e-49 Identity = 98/204 (48.04%), Postives = 129/204 (63.24%), Query Frame = 2 Query: 92 SDLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 +D Y +GFGN F++EA+ G+LP G NSP GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H F +H D P QLRW P+ +P PTDF+DGLYT+ G G G +H+Y N SM + F +ADG+ L+VPQ+GRL + TE G L + P +I V+P+G RF V L D +RGY+ E FG Sbjct: 24 NDQRYMTGFGNEFATEAVAGSLPIGQNSPQRVAHGLYAEQLSGTAFTAPRGQNRRSWLYRIRPAAVHGSFSLVEQSH----FHNDFGAGPVPPDQLRWSPLPLPSVPTDFVDGLYTMAGNGGPEAMSGVGVHVYAANASMQDRFFYDADGELLLVPQQGRLRVHTELGVLALEPQQIGVIPRGMRFRVELLDAAARGYVCENFG 223
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_PSEPW (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain W619) GN=hmgA PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.659e-49 Identity = 104/205 (50.73%), Postives = 134/205 (65.37%), Query Frame = 2 Query: 95 DLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFK--PRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 DL Y SGFGN F+SEA+ GALP G NSP P+GLYAE +SGT+FT R +R+WLYRI+PSA H F+ R P +G L TP +LRW P +P PTDFI+G + ++ G ++++Y N+SM+ F NADG+ L+VP++GRL IATE G LEV P EIAV+P+G +F V LPDG +RGYIAE G Sbjct: 8 DLQYLSGFGNEFASEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSELRRTWLYRIRPSALHPRFERLARQPLNGPL--------GGVTPNRLRWNPQPLPTEPTDFIEGWLPMVANSAADKPAGVSVYIYCANRSMER-VFFNADGELLIVPEQGRLRIATELGLLEVEPQEIAVVPRGMKFRVELPDGQARGYIAENHG 203
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_PSEAE (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa GN=hmgA PE=3 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.405e-48 Identity = 104/208 (50.00%), Postives = 133/208 (63.94%), Query Frame = 2 Query: 86 DFSDLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFK--PRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 D + L Y+SGFGN FSSEA+ GALP G NSP P+GLYAE +SGT+FT R +R+WLYRI PSA H PF+ R A +L TP +LRW P+ +P+ PTDF+DGL + G +I+ Y N+SM+ C F +ADG+ L+VPQ GRL + TE G L+V P EIAV+P+G +F V L DG +RGYIAE G Sbjct: 4 DSTALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSEARRTWLYRITPSAKHPPFRRLERQIAGAEL--------DAPTPNRLRWDPLALPEQPTDFLDGLLRMAANAPGDKPAGVSIYQYLANRSMERC-FYDADGELLLVPQLGRLRLCTELGALQVEPLEIAVIPRGMKFRVELLDGEARGYIAENHG 202
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_PSEAB (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=hmgA PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.405e-48 Identity = 104/208 (50.00%), Postives = 133/208 (63.94%), Query Frame = 2 Query: 86 DFSDLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFK--PRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 D + L Y+SGFGN FSSEA+ GALP G NSP P+GLYAE +SGT+FT R +R+WLYRI PSA H PF+ R A +L TP +LRW P+ +P+ PTDF+DGL + G +I+ Y N+SM+ C F +ADG+ L+VPQ GRL + TE G L+V P EIAV+P+G +F V L DG +RGYIAE G Sbjct: 4 DSTALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSEARRTWLYRITPSAKHPPFRRLERQIAGAEL--------DAPTPNRLRWDPLALPEQPTDFLDGLLRMAANAPGDKPAGVSIYQYLANRSMERC-FYDADGELLLVPQLGRLRLCTELGALQVEPLEIAVIPRGMKFRVELLDGEARGYIAENHG 202
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_PSEA8 (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa (strain LESB58) GN=hmgA PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.405e-48 Identity = 104/208 (50.00%), Postives = 133/208 (63.94%), Query Frame = 2 Query: 86 DFSDLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFK--PRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 D + L Y+SGFGN FSSEA+ GALP G NSP P+GLYAE +SGT+FT R +R+WLYRI PSA H PF+ R A +L TP +LRW P+ +P+ PTDF+DGL + G +I+ Y N+SM+ C F +ADG+ L+VPQ GRL + TE G L+V P EIAV+P+G +F V L DG +RGYIAE G Sbjct: 4 DSTALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSEARRTWLYRITPSAKHPPFRRLERQIAGAEL--------DAPTPNRLRWDPLALPEQPTDFLDGLLRMAANAPGDKPAGVSIYQYLANRSMERC-FYDADGELLLVPQLGRLRLCTELGALQVEPLEIAVIPRGMKFRVELLDGEARGYIAENHG 202
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_PSEA7 (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa (strain PA7) GN=hmgA PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.405e-48 Identity = 104/208 (50.00%), Postives = 133/208 (63.94%), Query Frame = 2 Query: 86 DFSDLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFK--PRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 D + L Y+SGFGN FSSEA+ GALP G NSP P+GLYAE +SGT+FT R +R+WLYRI PSA H PF+ R A +L TP +LRW P+ +P+ PTDF+DGL + G +I+ Y N+SM+ C F +ADG+ L+VPQ GRL + TE G L+V P EIAV+P+G +F V L DG +RGYIAE G Sbjct: 4 DSTALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSEARRTWLYRITPSAKHPPFRRLERQIAGAEL--------DAPTPNRLRWDPLALPEQPTDFLDGLLRMAANAPGDKPAGVSIYQYLANRSMERC-FYDADGELLLVPQLGRLRLCTELGALQVEPLEIAVIPRGMKFRVELLDGEARGYIAENHG 202 The following BLAST results are available for this feature:
BLAST of FC868743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868743 ID=FC868743; Name=FC868743; organism=Citrus clementina; type=EST; length=724bpback to top |