FC868744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868744 vs. ExPASy Swiss-Prot
Match: G3P_RAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus GN=Gapdh PE=1 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 1.826e-34 Identity = 71/139 (51.08%), Postives = 95/139 (68.35%), Query Frame = 3 Query: 9 IKIGISGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 425 +K+G++GFGRIGRLV R A D V++VA+NDPFI +YM YMF+YDS HG++ + +K ++ K ++ G KP+ +F R+P I W GAEYVVESTGVFT V+ISAPS DAPMFV+GVN ++Y Sbjct: 2 VKVGVNGFGRIGRLVTRAAFSCDKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138
BLAST of FC868744 vs. ExPASy Swiss-Prot
Match: G3P_PICCI (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia ciferrii GN=GPD PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.826e-34 Identity = 71/142 (50.00%), Postives = 97/142 (68.31%), Query Frame = 3 Query: 9 IKIGISGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 434 I +GI+GFGRIGRLV R+AL R D+++VA+NDPFI+ +Y +YMFKYDS HG++ E+ + E ++ G+K + V+ R+P IPW K G +YV++STGVF VVI+APS APMFVVGVNE +Y P+ Sbjct: 3 ITVGINGFGRIGRLVLRIALSRKDIQIVAINDPFIAPEYASYMFKYDSTHGRYS-GEVSHEGENIVIDGKK-IRVYQERDPVNIPWGKDGVDYVIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKYTPD 142
BLAST of FC868744 vs. ExPASy Swiss-Prot
Match: G3P_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus GN=Gapdh PE=1 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 2.385e-34 Identity = 71/139 (51.08%), Postives = 96/139 (69.06%), Query Frame = 3 Query: 9 IKIGISGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 425 +K+G++GFGRIGRLV R A+ VE+VA+NDPFI +YM YMF+YDS HG++ + +K ++ K ++ G KP+ +F R+P I W + GAEYVVESTGVFT V+ISAPS DAPMFV+GVN ++Y Sbjct: 2 VKVGVNGFGRIGRLVTRAAICSGKVEIVAINDPFIDLNYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KPITIFQERDPTNIKWGEAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138
BLAST of FC868744 vs. ExPASy Swiss-Prot
Match: G3P_HOMAM (Glyceraldehyde-3-phosphate dehydrogenase OS=Homarus americanus PE=1 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 2.385e-34 Identity = 78/141 (55.32%), Postives = 96/141 (68.09%), Query Frame = 3 Query: 12 KIGISGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 434 KIGI+GFGRIGRLV R AL ++VAVNDPFI+ +YM YMFKYDS HG +K E+K++D ++ G+K + VF PE IPW+K GAEY+VESTGVFT VVISAPS DAPMFV GVN ++Y + Sbjct: 2 KIGINGFGRIGRLVLRAALSCG-AQVVAVNDPFIALEYMVYMFKYDSTHGVFK-GEVKMEDGALVVDGKK-ITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVVISAPSADAPMFVCGVNLEKYSKD 139
BLAST of FC868744 vs. ExPASy Swiss-Prot
Match: G3P_BRUMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia malayi GN=G3PD PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.385e-34 Identity = 75/143 (52.45%), Postives = 95/143 (66.43%), Query Frame = 3 Query: 6 KIKIGISGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKP---VAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 425 K K+GI+GFGRIGRLV R A+++D V++VAVNDPFI+ DYM YMFKYDS HG++K + + K ++ K ++V ++P EIPW GAEYVVESTGVFT V+ISAPS DAPMFV+GVN Y Sbjct: 3 KPKVGINGFGRIGRLVLRAAVEKDTVDVVAVNDPFINIDYMVYMFKYDSTHGRFK-GSVSAEGGKLIVTNGKTTHHISVHNSKDPAEIPWGVDGAEYVVESTGVFTTTDKASAHLKGGAKKVIISAPSADAPMFVMGVNNDMY 144
BLAST of FC868744 vs. ExPASy Swiss-Prot
Match: G3P1_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces lactis GN=GAP1 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.385e-34 Identity = 74/142 (52.11%), Postives = 94/142 (66.20%), Query Frame = 3 Query: 9 IKIGISGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 434 +K+ I+GFGRIGRLV R+ALQR +E+VAVNDPFIS DY YMFKYDS HG++K E+ ++ G K +AVF ++P +PW K G + V++STGVF VVI+APSK APMFVVGVNE +Y E Sbjct: 2 VKVAINGFGRIGRLVLRIALQRKALEVVAVNDPFISVDYAAYMFKYDSTHGRYK-GEVTTSGNDLVIDGHK-IAVFQEKDPANLPWGKLGVDIVIDSTGVFKELDSAQKHLDAGAKKVVITAPSKTAPMFVVGVNEDKYNGE 141
BLAST of FC868744 vs. ExPASy Swiss-Prot
Match: G3P_CURLU (Glyceraldehyde-3-phosphate dehydrogenase OS=Curvularia lunata GN=GPD PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 3.115e-34 Identity = 76/142 (53.52%), Postives = 94/142 (66.20%), Query Frame = 3 Query: 9 IKIGISGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 434 +K+GI+GFGRIGR+V R A++ +DVE+VAVNDPFI Y YM KYDS HGQ+K ++KV D L K V ++P IPW++TGA YVVESTGVFT VVISAPS DAPMFV+GVN + YK + Sbjct: 3 VKVGINGFGRIGRIVFRNAIEHNDVEIVAVNDPFIEPHYAAYMLKYDSTHGQFK-GDIKV-DGNNLTVNGKTVRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSADAPMFVMGVNHETYKSD 142
BLAST of FC868744 vs. ExPASy Swiss-Prot
Match: G3P_COCIM (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides immitis GN=GPD PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 3.115e-34 Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 3 Query: 9 IKIGISGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 434 +K+GI+GFGRIGR+V R A++ +VE+VAVNDPFI T Y YM KYDS HG++K ++K D + G K V + R+P IPWA+TGA+YV+ESTGVFT V+ISAPS DAPMFV+GVN + YK + Sbjct: 3 VKVGINGFGRIGRIVFRNAVEHPEVEIVAVNDPFIETHYAAYMLKYDSTHGRFK-GDVKFSDNGLDVDG-KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYKSD 142
BLAST of FC868744 vs. ExPASy Swiss-Prot
Match: G3P1_GLORO (Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragment) OS=Globodera rostochiensis GN=GPD-1 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 3.115e-34 Identity = 75/148 (50.68%), Postives = 94/148 (63.51%), Query Frame = 3 Query: 6 KIKIGISGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEK------PVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKP 431 K K+GI+GFGRIGRL R A+++D V++VA+NDPFI DYM YMF YDS HG++ K+ L EK + VF ++P EI WA+ GAEYV+ESTGVFT VVISAPS DAPM+V+GVNE +Y P Sbjct: 3 KPKVGINGFGRIGRLALRAAVEKDTVQVVAINDPFIELDYMVYMFNYDSTHGRFNG---KISTSAGNLVVEKEGKATHTIKVFNLKDPAEIKWAEVGAEYVIESTGVFTTIEKASAHLKGGAKKVVISAPSADAPMYVMGVNEDKYDP 147
BLAST of FC868744 vs. ExPASy Swiss-Prot
Match: G3P_COLLN (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum lindemuthianum GN=GPDA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 5.313e-34 Identity = 75/139 (53.96%), Postives = 91/139 (65.47%), Query Frame = 3 Query: 9 IKIGISGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 425 IK+GI+GFGRIGR+V R A++ DVE+VAVNDPFI T Y YM KYDS HG + N +D L+ K V + R+P IPW +TGA+YVVESTGVFT V+ISAPS DAPM+V+GVNEK Y Sbjct: 4 IKVGINGFGRIGRIVFRNAVEHPDVEIVAVNDPFIETKYAAYMLKYDSTHGIF--NGEIAQDGNDLVINGKKVKFYTERDPAVIPWKETGADYVVESTGVFTTIDKAKAHLQGGAKKVIISAPSADAPMYVMGVNEKSY 140 The following BLAST results are available for this feature:
BLAST of FC868744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 249
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868744 ID=FC868744; Name=FC868744; organism=Citrus clementina; type=EST; length=436bpback to top |