FC868749 | Citrus Genome Database

Overview


Name	FC868749
Unique Name	FC868749
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	707

Libraries


Library Name	Type
AbioticL1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Ccv1_Contig10338	contig	Ccv1_Contig10338:2..706.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_ACECL (Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.529e-35
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVESSDT++NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.517 bits (371), Expect = 6.529e-35
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVESSDT++NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.8929 bits (224), Expect = 1.557e-19
Identity = 44/48 (91.67%), Postives = 47/48 (97.92%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVESSDT++NVK+KIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 24.6386 bits (52), Expect = 1.557e-19
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTLADY
Sbjct:   50 LEDGRTLADY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYCR (Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.528e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTI LEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.132 bits (370), Expect = 8.528e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTI LEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.5077 bits (223), Expect = 2.026e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTI LEVESSDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 24.6386 bits (52), Expect = 2.026e-19
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTLADY
Sbjct:   50 LEDGRTLADY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_ACACA (Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.528e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.132 bits (370), Expect = 8.528e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.5077 bits (223), Expect = 2.026e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 24.6386 bits (52), Expect = 2.026e-19
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTLADY
Sbjct:   50 LEDGRTLADY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_GEOCY (Ubiquitin OS=Geodia cydonium PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.114e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 146.747 bits (369), Expect = 1.114e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 91.2781 bits (225), Expect = 2.635e-19
Identity = 45/48 (93.75%), Postives = 47/48 (97.92%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 2.635e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_CAEEL (Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.114e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 146.747 bits (369), Expect = 1.114e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 91.2781 bits (225), Expect = 2.635e-19
Identity = 45/48 (93.75%), Postives = 47/48 (97.92%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 2.635e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_EUPEU (Ubiquitin OS=Euplotes eurystomus PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.455e-34
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 146.362 bits (368), Expect = 1.455e-34
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 89.7373 bits (221), Expect = 3.428e-19
Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 24.6386 bits (52), Expect = 3.428e-19
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTLADY
Sbjct:   50 LEDGRTLADY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_AGLNE (Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.455e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 146.362 bits (368), Expect = 1.455e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.8929 bits (224), Expect = 3.428e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVESSDTI+NVK KIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 3.428e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_XENLA (Ubiquitin OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_SPOFR (Ubiquitin OS=Spodoptera frugiperda PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

[Close]

BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_RAT (Ubiquitin OS=Rattus norvegicus GN=Rps27a PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 90.5077 bits (223), Expect = 4.460e-19
Identity = 45/48 (93.75%), Postives = 46/48 (95.83%), Query Frame = 1

Query:  526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48

HSP 4 Score: 23.483 bits (49), Expect = 4.460e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3

Query:  672 LEDGRTLADY 701
            LEDGRTL+DY
Sbjct:   50 LEDGRTLSDY 59

The following BLAST results are available for this feature:

BLAST of FC868749 vs. ExPASy Swiss-Prot

BLAST of FC868749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_ACECL	6.529e-35	96.05	Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1	[more]
UBIQ_TRYCR	8.528e-35	97.37	Ubiquitin OS=Trypanosoma cruzi PE=3 SV=1	[more]
UBIQ_ACACA	8.528e-35	97.37	Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1	[more]
UBIQ_GEOCY	1.114e-34	96.05	Ubiquitin OS=Geodia cydonium PE=3 SV=1	[more]
UBIQ_CAEEL	1.114e-34	96.05	Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 ...	[more]
UBIQ_EUPEU	1.455e-34	96.05	Ubiquitin OS=Euplotes eurystomus PE=3 SV=1	[more]
UBIQ_AGLNE	1.455e-34	96.05	Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1	[more]
UBIQ_XENLA	1.900e-34	96.05	Ubiquitin OS=Xenopus laevis PE=1 SV=1	[more]
UBIQ_SPOFR	1.900e-34	96.05	Ubiquitin OS=Spodoptera frugiperda PE=3 SV=1	[more]
UBIQ_RAT	1.900e-34	96.05	Ubiquitin OS=Rattus norvegicus GN=Rps27a PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	C31004C11EF AbioticL1 Citrus clementina cDNA clone C31004C11, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC868749 ID=FC868749; Name=FC868749; organism=Citrus clementina; type=EST; length=707bp
GAAAAATTCTCAGATTATCTTCTCCTTTAATTCGATAAAAGGCCTCCTTC
TGTTCTCTCTGTCAAGCAGATGCAAATCTTTGTGAAAACTCTCACCGGCA
AGACAATAACCCTTGAGGTTGAAAGCTCCGACACCATTGATAATGTAAAA
GCCAAGATCCAGGACAAGGAAGGGATCCCACCAGATCAGCAGAGGCTTAT
CTTTGCTGGTAAACAGCTCGAGGATGGTCGCACACTCGCTGACTATAATA
TCCAGAAGGAATCAACCCTCCACTTGGTCCTTCGACTTAGGGGTGGTATG
CAGATCTTTGTAAAGACCCTCACTGGCAAGACGATTACTCTTGAGGTGGA
AAGCTCCGACACCATTGACAATGTGAAAGCCAAGATTCAAGACAAGGAAG
GGATCCCACCAGACCAACAGAGGCTTATCTTTGCTGGTAAACAGCTTGAG
GATGGTCGCACACTTGCTGATTATAACATCCAGAAGGAGTCAACCCTCCA
CTTGGTCCTCCGTCTCCGTGGTGGTATGCAGATCTTTGTAAAGACCCTCA
CTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCCGACACCATTGACAAT
GTCAAAGCCAAAATTCAGGATAAGGAAGGGATCCCACCAGACCAGNCAAG
GCTCATCTTTGCCGGTAAACACTAGAGGATGGACGCACACTTGCAGACTA
CACATCC