FC868749
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.100e-33 Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1 Query: 70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297 MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 142.51 bits (358), Expect = 2.100e-33 Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1 Query: 298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525 MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 88.5817 bits (218), Expect = 4.753e-18 Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 1 Query: 526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669 MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK Sbjct: 1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 48 HSP 4 Score: 21.9422 bits (45), Expect = 4.753e-18 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 672 LEDGRTLADY 701 LE+GRTL+DY Sbjct: 50 LEEGRTLSDY 59
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.757e-32 Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 1 Query: 70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297 MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 137.502 bits (345), Expect = 6.757e-32 Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 1 Query: 298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525 MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 3 Score: 83.5741 bits (205), Expect = 1.447e-16 Identity = 42/48 (87.50%), Postives = 43/48 (89.58%), Query Frame = 1 Query: 526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669 MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQ RLIFA K Sbjct: 1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADK 48 HSP 4 Score: 21.9422 bits (45), Expect = 1.447e-16 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 672 LEDGRTLADY 701 LE+GRTL+DY Sbjct: 50 LEEGRTLSDY 59
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28 Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 1 Query: 70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297 MQIFVKTLTGKTIT+E E DT+ VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG Sbjct: 1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76 HSP 2 Score: 125.176 bits (313), Expect = 3.470e-28 Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 1 Query: 298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525 MQIFVKTLTGKTIT+E E DT+ VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG Sbjct: 1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76 HSP 3 Score: 73.1738 bits (178), Expect = 3.784e-13 Identity = 35/48 (72.92%), Postives = 39/48 (81.25%), Query Frame = 1 Query: 526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669 MQIFVKTLTGKTIT+E E DT+ VK KI DKEG+P DQ RLI+AGK Sbjct: 1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGK 48 HSP 4 Score: 20.7866 bits (42), Expect = 3.784e-13 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 672 LEDGRTLADY 701 LED +TLADY Sbjct: 50 LEDAQTLADY 59
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.249e-27 Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = 1 Query: 70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297 MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG Sbjct: 1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76 HSP 2 Score: 122.479 bits (306), Expect = 2.249e-27 Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = 1 Query: 298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525 MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG Sbjct: 1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76 HSP 3 Score: 70.8626 bits (172), Expect = 2.366e-12 Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = 1 Query: 526 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669 MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQ RLIFAGK Sbjct: 1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK 48 HSP 4 Score: 20.4014 bits (41), Expect = 2.366e-12 Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 672 LEDGRTLADY 701 LED +T+ADY Sbjct: 50 LEDSKTMADY 59
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 8.547e-27 Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 1 Query: 103 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 291 TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63 HSP 2 Score: 120.553 bits (301), Expect = 8.547e-27 Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 1 Query: 331 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 519 TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63 HSP 3 Score: 69.707 bits (169), Expect = 6.389e-13 Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 1 Query: 559 TITLEVESSDTIDNVKAKIQDKEGIPPDQXRLIFAGK 669 TITLEVE SDTI+NVKAKIQDKEGIPPDQ RLIFAGK Sbjct: 1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 37 HSP 4 Score: 23.483 bits (49), Expect = 6.389e-13 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 672 LEDGRTLADY 701 LEDGRTL+DY Sbjct: 39 LEDGRTLSDY 48
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20 Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 1 Query: 76 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297 I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76 HSP 2 Score: 99.3673 bits (246), Expect = 2.039e-20 Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 1 Query: 304 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525 I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.663e-20 Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1 Query: 76 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76 HSP 2 Score: 98.9821 bits (245), Expect = 2.663e-20 Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1 Query: 304 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.663e-20 Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1 Query: 76 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76 HSP 2 Score: 98.9821 bits (245), Expect = 2.663e-20 Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1 Query: 304 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.663e-20 Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1 Query: 76 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 297 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76 HSP 2 Score: 98.9821 bits (245), Expect = 2.663e-20 Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1 Query: 304 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 525 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
BLAST of FC868749 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.663e-20 Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 1 Query: 70 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 306 M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q S LHLVL LRGG I Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79 HSP 2 Score: 98.9821 bits (245), Expect = 2.663e-20 Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 1 Query: 298 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 534 M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q S LHLVL LRGG I Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79 The following BLAST results are available for this feature:
BLAST of FC868749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868749 ID=FC868749; Name=FC868749; organism=Citrus clementina; type=EST; length=707bpback to top |