FC868750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868750 vs. ExPASy Swiss-Prot
Match: CHM2B_HUMAN (Charged multivesicular body protein 2b OS=Homo sapiens GN=CHMP2B PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13 Identity = 47/172 (27.33%), Postives = 83/172 (48.26%), Query Frame = 3 Query: 207 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVXDCIAGETAAQL 722 K ++++ R+LR R I R ++++EK ++ IK AK + + K LA++LV RK R + +++ S+S + + G ++ +A+ M+ VN M + TMQ F KE K + EE +ND +D D V++V D I E + ++ Sbjct: 7 KKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKM 178
BLAST of FC868750 vs. ExPASy Swiss-Prot
Match: CHM2B_MOUSE (Charged multivesicular body protein 2b OS=Mus musculus GN=Chmp2b PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12 Identity = 46/172 (26.74%), Postives = 83/172 (48.26%), Query Frame = 3 Query: 207 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVXDCIAGETAAQL 722 K ++++ R+LR R I R ++++EK ++ IK AK + + + LA++LV RK R + +++ S+S + + G ++ +A+ M+ VN M + TMQ F KE K + EE +ND +D D V++V D I E + ++ Sbjct: 7 KKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKM 178
BLAST of FC868750 vs. ExPASy Swiss-Prot
Match: CHM2B_DANRE (Charged multivesicular body protein 2b OS=Danio rerio GN=chmp2b PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12 Identity = 45/178 (25.28%), Postives = 84/178 (47.19%), Query Frame = 3 Query: 189 MNMIKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVXDCIAGETAAQL 722 M + K ++++ ++LR R I R ++++EK ++ IK AK + + K LA++LV+ RK R Y +++ S+S + + G + + + M+ VN M + T+Q F KE K + EE +ND +D + V++V D I E + ++ Sbjct: 1 MTSLFKKKTVDDVIKEQNKELRGTQRQIARDRTALEKQEKQLEMEIKKMAKTGNRDACKVLAKQLVQVRKQKTRTYAVSSKVTSMSTQTKLMNSQMKMAGAMATTTKTMQAVNKKMDPKKTMQTLQNFQKETAKMDMTEEMMNDTLDEIFEDSGDEEESQDIVNQVLDEIGIEISGKM 178
BLAST of FC868750 vs. ExPASy Swiss-Prot
Match: CHM2B_BOVIN (Charged multivesicular body protein 2b OS=Bos taurus GN=CHMP2B PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12 Identity = 46/172 (26.74%), Postives = 83/172 (48.26%), Query Frame = 3 Query: 207 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMSSAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVXDCIAGETAAQL 722 K ++++ R+LR R I R ++++EK ++ IK AK + + + LA++LV RK R + +++ S+S + + G ++ +A+ M+ VN M + TMQ F KE K + EE +ND +D D V++V D I E + ++ Sbjct: 7 KKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKM 178 The following BLAST results are available for this feature:
BLAST of FC868750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868750 ID=FC868750; Name=FC868750; organism=Citrus clementina; type=EST; length=727bpback to top |