FC868753
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL4A_HUMAN (Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3) HSP 1 Score: 122.094 bits (305), Expect = 3.189e-27 Identity = 69/218 (31.65%), Postives = 116/218 (53.21%), Query Frame = 2 Query: 68 IEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVTTMTFHLTEICKSI--EAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKTP-VHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDLGSFVYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYL 712 I+ F+ R + Y + TW+ L A+ + + + + EELY+ N+ HK LY L H+ ++ LFL+++N W DH + + MIR I +++DRT++ P + ++GL L+R +I +Q++ D +L L++RERSGE ++R L+R++ ML DL VY+D FE FLE + Y E Q ++ + +YL Sbjct: 45 IKNFRDRPRLPDNYTQDTWRKLHEAVRAVQSSTSIRYNLEELYQAVENLCSHKVSPMLYKQLRQACEDHVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSTLPSIWDMGLELFRTHIISDKMVQSKTIDGILLLIERERSGEAVDRSLLRSLLGMLSDLQ--VYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYL 260
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL4_DICDI (Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.932e-20 Identity = 65/229 (28.38%), Postives = 108/229 (47.16%), Query Frame = 2 Query: 47 PKKRTFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKF-GEKLYSGLVTTMTFHLTEICKSIEAAQGG---LFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKT--PVHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDLGSFVYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYLK 715 P K+ I+ K Y + +W L AI I A+ L+ EELY+ N+ K LY+ + + H+T K + +FL+ +N W DH + MIR I +Y+DRT++ T + +LGL + + + S ++ + D+LL ++ ER G+ I+R L+ ++ KML L + FE F++ + FY +E I + YLK Sbjct: 46 PAKKILVIKNLKQIPKTPDNYEDSSWNKLSSAITSINMKQATTLTQEELYKMVENLCFDKILASNLYNKISVQIEKHITLTIKHLVLTMSSDPIIFLKSINSIWKDHTNQMIMIRSIFLYLDRTYVIQNSNTVKSIWDLGLFYFGNNLSQQSNLERKTIDSLLYSIRCEREGDEIDRDLIHSLVKMLSSLNIYT---KFEIEFIKETNRFYDMEGNSKINEIETPMYLK 271
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.291e-17 Identity = 47/187 (25.13%), Postives = 99/187 (52.94%), Query Frame = 2 Query: 191 LYRNAYNMVL----HKFGEKLYSGLVTTMTFHLTE-ICKSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKTPVHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDLGSFV---YQDDFEKHFLEVSADFYRLESQEFIESCDCGDYLKKLKD 727 LY YNM H + ++LY ++ + ++ L EL ++W++H ++ + Y+DR FI P++E+GL +RD+V +++ ++++ ++ LV +ER GE I+R L++N+ + +++G Y++DFE L+ ++ +Y ++ +I+ C DY+ K ++ Sbjct: 42 LYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYFIARRSLPPLNEVGLTCFRDLVY--NELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVEIGMGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEE 226
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL1_DICDI (Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 52/181 (28.73%), Postives = 91/181 (50.28%), Query Frame = 2 Query: 230 GEKLYSGLVTTMTFHLTEICKSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIP---STHKTPVHE---LGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDLGSF----------VYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYLKKLK 724 GE LY+ L + H++++ K E L +W + A++ I +I YM+R +I K V+E L L +WRD + + ++ RL ++LL++++ ER+G IN L++ + + LG VY+ FE+ FL + ++Y ES +FI DY+KK++ Sbjct: 78 GEDLYNRLNLFLKKHMSQLLKLTETKMDEPLLNYYYTEWDRYTSAMKYINNIFQYMNRYWIKREIDDGKKEVYEIFILSLVIWRDCLF--TPLKQRLTNSLLDIIESERNGYQINTHLIKGVINGYVSLGLNREKPKETILQVYKSGFEELFLTATENYYTNESAKFISENSVADYMKKVE 256
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL1_PONAB (Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.438e-11 Identity = 56/248 (22.58%), Postives = 106/248 (42.74%), Query Frame = 2 Query: 113 EKTWKILEHAIHEIYNHNASGLS-FEELYRNAYNMV--LHK-------------------------FGEKLYSGLVTTMTFHLTEICKSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKT------PVHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDLGS------------FVYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYLKK 718 ++ W L I ++Y + S + ELY + YN +H+ G +LY L + +LT + K E L+ ++W D+ + +++ I Y++R ++ ++ L L WRD + + ++ + +L+L+++ER+GE IN L+ + + ++LG VY++ FE FL + FY ES EF++ +Y+KK Sbjct: 18 DQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSNQARGAGVPPSKSKKGQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKK 263
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL1_MOUSE (Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.438e-11 Identity = 56/248 (22.58%), Postives = 106/248 (42.74%), Query Frame = 2 Query: 113 EKTWKILEHAIHEIYNHNASGLS-FEELYRNAYNMV--LHK-------------------------FGEKLYSGLVTTMTFHLTEICKSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKT------PVHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDLGS------------FVYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYLKK 718 ++ W L I ++Y + S + ELY + YN +H+ G +LY L + +LT + K E L+ ++W D+ + +++ I Y++R ++ ++ L L WRD + + ++ + +L+L+++ER+GE IN L+ + + ++LG VY++ FE FL + FY ES EF++ +Y+KK Sbjct: 18 DQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSNQARGAGVPPSKSKKGQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKK 263
BLAST of FC868753 vs. ExPASy Swiss-Prot
Match: CUL1_HUMAN (Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.438e-11 Identity = 56/248 (22.58%), Postives = 106/248 (42.74%), Query Frame = 2 Query: 113 EKTWKILEHAIHEIYNHNASGLS-FEELYRNAYNMV--LHK-------------------------FGEKLYSGLVTTMTFHLTEICKSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYMDRTFIPSTHKT------PVHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNITKMLMDLGS------------FVYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYLKK 718 ++ W L I ++Y + S + ELY + YN +H+ G +LY L + +LT + K E L+ ++W D+ + +++ I Y++R ++ ++ L L WRD + + ++ + +L+L+++ER+GE IN L+ + + ++LG VY++ FE FL + FY ES EF++ +Y+KK Sbjct: 18 DQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSNQARGAGVPPSKSKKGQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRP--LNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKK 263 The following BLAST results are available for this feature:
BLAST of FC868753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868753 ID=FC868753; Name=FC868753; organism=Citrus clementina; type=EST; length=742bpback to top |