FC868756

Overview
NameFC868756
Unique NameFC868756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_SALEP (Potassium-transporting ATPase B chain OS=Salmonella enteritidis PT4 (strain P125109) GN=kdpB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21
Identity = 55/141 (39.01%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            R+ +  +G   P  VE  V  +     T ++V     ++GV+ + D VK         L KMG++ VM+TGDN  TA A+A E G+ D +A+  P  K   +R +Q +G +VAM GDG ND+PALA ADV +A+ +GT  A
Sbjct:  402 RRHVESNGGHFPADVEQNVENVARLGATPLVVVEGARVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAA 542          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_SALDC (Potassium-transporting ATPase B chain OS=Salmonella dublin (strain CT_02021853) GN=kdpB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21
Identity = 55/141 (39.01%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            R+ +  +G   P  VE  V  +     T ++V     ++GV+ + D VK         L KMG++ VM+TGDN  TA A+A E G+ D +A+  P  K   +R +Q +G +VAM GDG ND+PALA ADV +A+ +GT  A
Sbjct:  402 RRHVESNGGHFPADVEQNVENVARLGATPLVVVEGARVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAA 542          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_AGRT5 (Potassium-transporting ATPase B chain OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=kdpB PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21
Identity = 55/152 (36.18%), Postives = 83/152 (54.61%), Query Frame = 1
Query:  250 IQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGT 705
            +  ++ G  +  GN  L  ++       + +   ++ ++  T + V  D  L+GV+ + D VK         L +MG+R VM+TGDN  TA A+A E G+ D +A   P  K + +R  Q  G +VAM GDG ND+PALA ADVG+A+  GT
Sbjct:  400 VLAYVDGGALQHGNAALALKTETDATRAIRAIAEDIAKAGGTPLAVVRDGKLLGVVQLKDIVKGGIRERFAELRRMGIRTVMITGDNPMTAAAIAAEAGVDDFLAQATPENKLELIREEQAKGKLVAMCGDGTNDAPALAQADVGVAMNTGT 551          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_THETN (Potassium-transporting ATPase B chain OS=Thermoanaerobacter tengcongensis GN=kdpB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 50/138 (36.23%), Postives = 84/138 (60.87%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGT 705
            ++ + E G +IPD ++  V ++     T ++V  D+ ++GV+ + D +K       + L  MG++ +M+TGDN  TA  +A E G+ + +A+  P  K + ++  Q  G +VAM GDG ND+PALA ADVG+A+ +GT
Sbjct:  401 KEYIGEKGGSIPDDLDKEVEKISLLGGTPLVVVKDNEVLGVIYLKDTIKPGMKERFKQLRAMGIKTIMITGDNPLTAKTIAEEAGVDEFIAESKPEDKINVIKREQAQGRLVAMTGDGTNDAPALAQADVGLAMNSGT 538          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_SERP5 (Potassium-transporting ATPase B chain OS=Serratia proteamaculans (strain 568) GN=kdpB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 52/130 (40.00%), Postives = 77/130 (59.23%), Query Frame = 1
Query:  325 PDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            P  V+  V  +  +  T ++VA    ++GV+ + D VK         L KMG++ VM+TGDN  TA A+A E G+ D +++  P  K   +R +Q +G +VAM GDG ND+PALA ADV +A+ +GT  A
Sbjct:  419 PQAVDDLVASVARTGGTPLVVAEGPRVLGVVALKDIVKGGIKERFVELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLSEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAA 548          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_ECO8A (Potassium-transporting ATPase B chain OS=Escherichia coli O8 (strain IAI1) GN=kdpB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 53/141 (37.59%), Postives = 81/141 (57.45%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            R+ +  +G   P  V+  V ++     T ++V     ++GV+ + D VK         L +MG++ VM+TGDN  TA A+A E G+ D +A+  P  K   +R +Q +G +VAM GDG ND+PALA ADV +A+ +GT  A
Sbjct:  402 RRHIEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKGGIKERFAQLRQMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAA 542          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_ECO55 (Potassium-transporting ATPase B chain OS=Escherichia coli (strain 55989 / EAEC) GN=kdpB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 53/141 (37.59%), Postives = 81/141 (57.45%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            R+ +  +G   P  V+  V ++     T ++V     ++GV+ + D VK         L +MG++ VM+TGDN  TA A+A E G+ D +A+  P  K   +R +Q +G +VAM GDG ND+PALA ADV +A+ +GT  A
Sbjct:  402 RRHIEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKGGIKERFAQLRQMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAA 542          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_BACHK (Potassium-transporting ATPase B chain OS=Bacillus thuringiensis subsp. konkukian GN=kdpB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 66/216 (30.56%), Postives = 109/216 (50.46%), Query Frame = 1
Query:   70 ASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNR-KLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            A +    E P  ++V+EY +               S+++E    G  +     + + G  +Q     ++  VG+  + +   G TIP  V      + +   T ++VA D+ + G++ + D VK       E L +MG++ VM TGDN  TA  +A+E G+ + +A+  P  K   +++ Q  G +VAM GDG ND+PALA ADVG+A+ +GT  A
Sbjct:  355 AISSVLDETPEGRSVIEYVQ-----------AKSISYNRELAEQGEFIPFKAETRMSGVDLQDGTKVRKGAVGSVIEWVRSQGGTIPKDVNQKADFISKEGGTPLVVAVDNRIYGLIYLKDTVKPGMRERFEQLRQMGIKTVMCTGDNPLTAATIAKEAGVDEFVAECKPEDKIAVIKAEQDKGKLVAMTGDGTNDAPALAQADVGLAMNSGTTAA 559          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_BACC3 (Potassium-transporting ATPase B chain OS=Bacillus cereus (strain 03BB102) GN=kdpB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 66/216 (30.56%), Postives = 109/216 (50.46%), Query Frame = 1
Query:   70 ASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNR-KLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            A +    E P  ++V+EY +               S+++E    G  +     + + G  +Q     ++  VG+  + +   G TIP  V      + +   T ++VA D+ + G++ + D VK       E L +MG++ VM TGDN  TA  +A+E G+ + +A+  P  K   +++ Q  G +VAM GDG ND+PALA ADVG+A+ +GT  A
Sbjct:  350 AISSVLDETPEGRSVIEYVK-----------TKSISYNREIAEQGEFVPFKAETRMSGVDLQDGTKVRKGAVGSVIEWVRSQGGTIPKDVNQKADFISKEGGTPLVVAVDNRIYGLIYLKDTVKPGMRERFEQLRQMGIKTVMCTGDNPLTAATIAKEAGVDEFVAECKPEDKIAVIKAEQDKGKLVAMTGDGTNDAPALAQADVGLAMNSGTTAA 554          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_BACAH (Potassium-transporting ATPase B chain OS=Bacillus thuringiensis (strain Al Hakam) GN=kdpB PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 66/216 (30.56%), Postives = 109/216 (50.46%), Query Frame = 1
Query:   70 ASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNR-KLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            A +    E P  ++V+EY +               S+++E    G  +     + + G  +Q     ++  VG+  + +   G TIP  V      + +   T ++VA D+ + G++ + D VK       E L +MG++ VM TGDN  TA  +A+E G+ + +A+  P  K   +++ Q  G +VAM GDG ND+PALA ADVG+A+ +GT  A
Sbjct:  350 AISSVLDETPEGRSVIEYVQ-----------AKSISYNRELAEQGEFIPFKAETRMSGVDLQDGTKVRKGAVGSVIEWVRSQGGTIPKDVNQKADFISKEGGTPLVVAVDNRIYGLIYLKDTVKPGMRERFEQLRQMGIKTVMCTGDNPLTAATIAKEAGVDEFVAECKPEDKIAVIKAEQDKGKLVAMTGDGTNDAPALAQADVGLAMNSGTTAA 554          
The following BLAST results are available for this feature:
BLAST of FC868756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
ATKB_SALEP3.184e-2139.01Potassium-transporting ATPase B chain OS=Salmonell... [more]
ATKB_SALDC3.184e-2139.01Potassium-transporting ATPase B chain OS=Salmonell... [more]
ATKB_AGRT53.184e-2136.18Potassium-transporting ATPase B chain OS=Agrobacte... [more]
ATKB_THETN4.159e-2136.23Potassium-transporting ATPase B chain OS=Thermoana... [more]
ATKB_SERP54.159e-2140.00Potassium-transporting ATPase B chain OS=Serratia ... [more]
ATKB_ECO8A4.159e-2137.59Potassium-transporting ATPase B chain OS=Escherich... [more]
ATKB_ECO554.159e-2137.59Potassium-transporting ATPase B chain OS=Escherich... [more]
ATKB_BACHK4.159e-2130.56Potassium-transporting ATPase B chain OS=Bacillus ... [more]
ATKB_BACC34.159e-2130.56Potassium-transporting ATPase B chain OS=Bacillus ... [more]
ATKB_BACAH4.159e-2130.56Potassium-transporting ATPase B chain OS=Bacillus ... [more]

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Properties
Property NameValue
Genbank descriptionC31004D06EF AbioticL1 Citrus clementina cDNA clone C31004D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868756 ID=FC868756; Name=FC868756; organism=Citrus clementina; type=EST; length=715bp
GGGAGAGCTACTGTTACAACTGCTAAGGTTTTCACGAAAATGGATCGTGG
TGAATTTCTTACATTGGTGGCTTCAGCAGAGGCTAGCAGTGAACATCCAT
TGGCCAAAGCAGTTGTGGAGTATGCACGTCATTTCCATTTCTTTGATGAT
CCCTCTTTGAACCCCGATGGCCAAAGCCACAGCAAAGAGTCCACTGGTTC
TGGATGGCTTCTTGATGTCTCGGATTTCTCTGCTCTGCCTGGAAGAGGTA
TCCAGTGCTTTATAAGTGGAAAACAGGTTTTGGTGGGTAACCGGAAGTTG
CTGAATGAAAGTGGAATCACCATTCCAGACCATGTAGAAAGTTTTGTTGT
GGAACTGGAGGAAAGTGCTAGGACGGGCATACTTGTTGCGTATGATGATA
ACTTGATCGGTGTTATGGGAATTGCTGACCCAGTTAAGAGGGAAGCTGCT
GTAGTTGTAGAGGGCCTTTTAAAAATGGGTGTGAGACCCGTCATGGTAAC
TGGAGATAATTGGAGGACAGCGCATGCTGTTGCTAGAGAGATCGGCATTC
AAGATGTGATGGCAGATGTAATGCCAGCAGGAAAAGCTGATGCCGTCCGC
TCATTTCAGAAAGACGGAAGCATAGTAGCTATGGTTGGGGATGGAATCAA
TGATTCTCCAGCTCTAGCTGCGGCTGATGTTGGTATGGCTATTGGGGCAG
GTACAGATATTGCCA
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