FC868756

Overview
NameFC868756
Unique NameFC868756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_SALCH (Potassium-transporting ATPase B chain OS=Salmonella choleraesuis GN=kdpB PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.431e-21
Identity = 55/141 (39.01%), Postives = 79/141 (56.03%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            R+ +  +G   P  VE  V  +     T ++V     ++GV+ + D VK         L KMG++ VM+TGDN  TA A A E G+ D +A+  P  K   +R +Q +G +VAM GDG ND+PALA ADV +A+ +GT  A
Sbjct:  402 RRHVESNGGHFPADVEQNVENVARLGATPLVVVEGARVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAEAFAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAA 542          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_SALA4 (Potassium-transporting ATPase B chain OS=Salmonella agona (strain SL483) GN=kdpB PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.431e-21
Identity = 55/141 (39.01%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            R+ +  +G   P  VE  V  +     T ++V     ++GV+ + D VK         L KMG++ VM+TGDN  TA A+A E G+ D +A+  P  K   +R +Q +G +VAM GDG ND+PALA ADV +A+ +GT  A
Sbjct:  402 RRHVESNGGHFPADVEQNVENVARLGATPLVVVEGARVLGVITLKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAA 542          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_ESCF3 (Potassium-transporting ATPase B chain OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=kdpB PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.431e-21
Identity = 53/141 (37.59%), Postives = 81/141 (57.45%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            R+ +  +G   P  V+  V ++     T ++V     ++GV+ + D VK         L +MG++ VM+TGDN  TA A+A E G+ D +A+  P  K   +R +Q +G +VAM GDG ND+PALA ADV +A+ +GT  A
Sbjct:  402 RRHIEANGGHFPADVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKGGIKERFAQLRQMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAA 542          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_ENT38 (Potassium-transporting ATPase B chain OS=Enterobacter sp. (strain 638) GN=kdpB PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.431e-21
Identity = 52/130 (40.00%), Postives = 76/130 (58.46%), Query Frame = 1
Query:  325 PDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            P  V+  V  +     T ++VA    ++GV+ + D VK         L KMG++ VM+TGDN  TA A+A E G+ D +++  P  K   +R +Q +G +VAM GDG ND+PALA ADV +A+ +GT  A
Sbjct:  413 PPEVDRLVENVARQGATPLVVAEGATVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLSEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAA 542          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_BACC0 (Potassium-transporting ATPase B chain OS=Bacillus cereus (strain AH820) GN=kdpB PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.431e-21
Identity = 61/181 (33.70%), Postives = 98/181 (54.14%), Query Frame = 1
Query:  175 SHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNR-KLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            S++KE    G  +     + + G  +Q     ++  VG+  + +   G TIP  V      + +   T ++VA D+ + G++ + D VK       E L +MG++ VM TGDN  TA  +A+E G+ + +A+  P  K   +++ Q  G +VAM GDG ND+PALA ADVG+A+ +GT  A
Sbjct:  379 SYNKELAEQGEFIPFKAETRMSGVDLQDGTKVRKGAVGSVIEWVKSQGGTIPKDVNQKADFISKEGGTPLVVAVDNRIYGLIYLKDTVKPGMRERFEQLRQMGIKTVMCTGDNPLTAATIAKEAGVDEFVAECKPEDKIAVIKAEQDKGKLVAMTGDGTNDAPALAQADVGLAMNSGTTAA 559          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_TOLAT (Potassium-transporting ATPase B chain OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=kdpB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.264e-21
Identity = 52/130 (40.00%), Postives = 79/130 (60.77%), Query Frame = 1
Query:  325 PDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            P  VE  V ++ ++  T ++V+    ++GV+ + D VK         L +MG++ VM+TGDN  TA A+A E G+ D +A+  P  K   +R +Q +G +VAM GDG ND+PALA ADV +A+ +GT  A
Sbjct:  419 PPEVEKQVEDVAKTGGTPLVVSEGACVLGVVALKDIVKGGIKERFAELRRMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAA 548          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_RHILO (Potassium-transporting ATPase B chain OS=Rhizobium loti GN=kdpB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.210e-20
Identity = 57/129 (44.19%), Postives = 76/129 (58.91%), Query Frame = 1
Query:  319 TIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGT 705
            TI D +++   E+ +S  T + V  D  L+GV+ + D VK         L KMG+R VM+TGDN  TA A+A E G+ D +A   P  K   +R  Q  G +VAM GDG ND+PALA ADVG+A+  GT
Sbjct:  420 TIRD-LQAIADEVAKSGGTPLAVERDGRLLGVVHLKDIVKGGIRERFAELRKMGIRTVMITGDNPMTAAAIAAEAGVDDFLAQATPEDKLKLIRDEQAKGKLVAMCGDGTNDAPALAQADVGVAMNTGT 547          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_CLOAB (Potassium-transporting ATPase B chain OS=Clostridium acetobutylicum GN=kdpB PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.580e-20
Identity = 52/141 (36.88%), Postives = 84/141 (59.57%), Query Frame = 1
Query:  292 RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            +K + E    IP  ++  V ++ +   T ++V  D+ + GV+ + D VK       E L ++G++ +M TGDN  TA  +A+E G+   +A+  P  K +A++  Q +G +VAM GDG ND+PALA ADVG+A+ +GT  A
Sbjct:  401 KKRVQELKGVIPKDLDEAVNKVAKLGGTPLVVCVDNKIYGVIYLKDTVKPGLVERFERLREIGIKTIMCTGDNPLTAATIAKEAGVDGFIAECKPEDKIEAIKKEQDEGKLVAMTGDGTNDAPALAQADVGLAMNSGTTAA 541          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_BACCZ (Potassium-transporting ATPase B chain OS=Bacillus cereus (strain ZK / E33L) GN=kdpB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.580e-20
Identity = 53/138 (38.41%), Postives = 81/138 (58.70%), Query Frame = 1
Query:  301 LNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            +   G TIP  V      + +   T ++VA +D++ G++ + D VK       E L +MG++ VM TGDN  TA  +A+E G+ + +A+  P  K   +++ Q  G +VAM GDG ND+PALA ADVG+A+ +GT  A
Sbjct:  422 VQSQGGTIPKDVNQKADFISKEGGTPLVVAVNDHIYGLIYLKDTVKPGMRERFEQLRQMGIKTVMCTGDNPLTAATIAKEAGVDEFVAECKPEDKIAVIKAEQDKGKLVAMTGDGTNDAPALAQADVGLAMNSGTTAA 559          
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATKB_BACC2 (Potassium-transporting ATPase B chain OS=Bacillus cereus (strain G9842) GN=kdpB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.580e-20
Identity = 66/216 (30.56%), Postives = 108/216 (50.00%), Query Frame = 1
Query:   70 ASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNR-KLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714
            A +    E P  ++V+EY +               S+++E    G  +     + + G  +Q     ++  VG   + +   G TIP  V      + +   T ++VA D+ + G++ + D VK       E L +MG++ VM TGDN  TA  +A+E G+ + +A+  P  K   +++ Q  G +VAM GDG ND+PALA ADVG+A+ +GT  A
Sbjct:  355 AISSVLDETPEGRSVIEYVQGKSI-----------SYNRELAEQGEFVPFKAETRMSGVDLQDGTKVRKGAVGAVIEWVESQGGTIPKDVNQKADLISKEGGTPLVVAVDNRIYGLIYLKDTVKPGMRERFEQLRQMGIKTVMCTGDNPLTAATIAKEAGVDEFVAECKPEDKIAVIKAEQDKGKLVAMTGDGTNDAPALAQADVGLAMNSGTTAA 559          
The following BLAST results are available for this feature:
BLAST of FC868756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
ATKB_SALCH5.431e-2139.01Potassium-transporting ATPase B chain OS=Salmonell... [more]
ATKB_SALA45.431e-2139.01Potassium-transporting ATPase B chain OS=Salmonell... [more]
ATKB_ESCF35.431e-2137.59Potassium-transporting ATPase B chain OS=Escherich... [more]
ATKB_ENT385.431e-2140.00Potassium-transporting ATPase B chain OS=Enterobac... [more]
ATKB_BACC05.431e-2133.70Potassium-transporting ATPase B chain OS=Bacillus ... [more]
ATKB_TOLAT9.264e-2140.00Potassium-transporting ATPase B chain OS=Tolumonas... [more]
ATKB_RHILO1.210e-2044.19Potassium-transporting ATPase B chain OS=Rhizobium... [more]
ATKB_CLOAB1.580e-2036.88Potassium-transporting ATPase B chain OS=Clostridi... [more]
ATKB_BACCZ1.580e-2038.41Potassium-transporting ATPase B chain OS=Bacillus ... [more]
ATKB_BACC21.580e-2030.56Potassium-transporting ATPase B chain OS=Bacillus ... [more]

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Properties
Property NameValue
Genbank descriptionC31004D06EF AbioticL1 Citrus clementina cDNA clone C31004D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868756 ID=FC868756; Name=FC868756; organism=Citrus clementina; type=EST; length=715bp
GGGAGAGCTACTGTTACAACTGCTAAGGTTTTCACGAAAATGGATCGTGG
TGAATTTCTTACATTGGTGGCTTCAGCAGAGGCTAGCAGTGAACATCCAT
TGGCCAAAGCAGTTGTGGAGTATGCACGTCATTTCCATTTCTTTGATGAT
CCCTCTTTGAACCCCGATGGCCAAAGCCACAGCAAAGAGTCCACTGGTTC
TGGATGGCTTCTTGATGTCTCGGATTTCTCTGCTCTGCCTGGAAGAGGTA
TCCAGTGCTTTATAAGTGGAAAACAGGTTTTGGTGGGTAACCGGAAGTTG
CTGAATGAAAGTGGAATCACCATTCCAGACCATGTAGAAAGTTTTGTTGT
GGAACTGGAGGAAAGTGCTAGGACGGGCATACTTGTTGCGTATGATGATA
ACTTGATCGGTGTTATGGGAATTGCTGACCCAGTTAAGAGGGAAGCTGCT
GTAGTTGTAGAGGGCCTTTTAAAAATGGGTGTGAGACCCGTCATGGTAAC
TGGAGATAATTGGAGGACAGCGCATGCTGTTGCTAGAGAGATCGGCATTC
AAGATGTGATGGCAGATGTAATGCCAGCAGGAAAAGCTGATGCCGTCCGC
TCATTTCAGAAAGACGGAAGCATAGTAGCTATGGTTGGGGATGGAATCAA
TGATTCTCCAGCTCTAGCTGCGGCTGATGTTGGTATGGCTATTGGGGCAG
GTACAGATATTGCCA
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