FC868756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPA_ECOLI (Copper-exporting P-type ATPase A OS=Escherichia coli (strain K12) GN=copA PE=1 SV=4) HSP 1 Score: 156.762 bits (395), Expect = 1.089e-37 Identity = 88/238 (36.97%), Postives = 133/238 (55.88%), Query Frame = 1 Query: 1 GRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 G+ V K F +D + L L A+ E S HPLA+A+++ A G L V+ F L G G+ G +L+GN+ LLNE + +E+ + T +L+A D + ++ + DP++ ++ ++ L K G R VM+TGDN TA+A+A+E GI +V+A V+P GKA+A++ Q +G VAMVGDGIND+PALA ADVG+A+G G+D+A Sbjct: 531 GKPQVVAVKTFADVDEAQALRLAAALEQGSSHPLARAILDKA-----------------------GDMQLPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVGTKA-IEAEITAQASQGATPVLLAVDGKAVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPDGKAEAIKHLQSEGRQVAMVGDGINDAPALAQADVGIAMGGGSDVA 744
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATCU1_RHIME (Copper-transporting ATPase 1 OS=Rhizobium meliloti GN=actP1 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.423e-37 Identity = 94/241 (39.00%), Postives = 135/241 (56.02%), Query Frame = 1 Query: 1 GRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTG---ILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 GR +T + E L+ VAS EA SEHP+A+A+V A+ S G L+ +DF A PG G++ +SG V VG + + GI V FVVE E +G + A D L ++ ++DP+K ++ L +G++ M+TGDN RTA A+AR++GI +V+A+V+P GK DAV+ ++ G VA +GDGIND+PAL ADVG+A+G GTDIA Sbjct: 522 GRPELTDIVPADGFEADEVLSFVASLEALSEHPIAEAIVSAAK--------------------SRGIA-LVPATDFEATPGFGVRGAVSGLPVQVGADRAFSGVGID----VSPFVVEAERLGNSGKSPLYAAIDGRLAAIIAVSDPIKDTTPQAIKALHDLGLKVAMITGDNRRTADAIARQLGIDEVVAEVLPDGKVDAVKRLREGGRKVAFIGDGINDAPALTEADVGIAVGTGTDIA 737
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPA_ECO57 (Copper-exporting P-type ATPase A OS=Escherichia coli O157:H7 GN=copA PE=3 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 9.222e-37 Identity = 86/238 (36.13%), Postives = 131/238 (55.04%), Query Frame = 1 Query: 1 GRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 G+ V K F D + L L A+ E S HPLA+A+++ A L V+ F L G G+ G +L+GN+ LLN+ + +E+ + T +L+A D + ++ + DP++ ++ ++ L K G R VM+TGDN TA+A+A+E GI +V+A V+P GKA+A++ Q +G VAMVGDGIND+PALA ADVG+A+G G+D+A Sbjct: 531 GKPQVVAVKTFADFDEAQALRLAAALEQGSSHPLARAILDKASDMQ-----------------------LPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNDQQVDTKA-IEADISAQASQGATPVLLAVDGKAVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPDGKAEAIKRLQSEGRQVAMVGDGINDAPALAQADVGIAMGGGSDVA 744
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATP7A_MOUSE (Copper-transporting ATPase 1 OS=Mus musculus GN=Atp7a PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.573e-36 Identity = 100/283 (35.34%), Postives = 147/283 (51.94%), Query Frame = 1 Query: 1 GRATVTTAKVFT---KMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSL-------------------NPDGQSHS-----------------------KESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 G V KV K+ R + L +V +AE++SEHPL AV +Y + D +L N +G H + ST S ++D +A+ + + VL+GNR+ + +G+ I + V+ ++E E RT +LV DD L G++ IAD VK EA + V L MG+ V++TGDN +TA ++A ++GI V A+V+P+ K V+ Q++G VAMVGDGINDSPALA A+VG+AIG GTD+A Sbjct: 1043 GTPVVNQVKVLVESNKISRNKILAIVGTAESNSEHPLGAAVTKYCKKE--LDTETLGTCTDFQVVPGCGISCKVTNIEGLLHKSNLKIEENNIKNASLVQIDAINEQSSTSSSMIIDAHLSNAVNTQQYK-------VLIGNREWMIRNGLVISNDVDESMIEHERRGRTAVLVTIDDELCGLIAIADTVKPEAELAVHILKSMGLEVVLMTGDNSKTARSIASQVGITKVFAEVLPSHKVAKVKQLQEEGKRVAMVGDGINDSPALAMANVGIAIGTGTDVA 1316
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATCU_RHILV (Copper-transporting P-type ATPase OS=Rhizobium leguminosarum bv. viciae GN=actP PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.573e-36 Identity = 88/238 (36.97%), Postives = 130/238 (54.62%), Query Frame = 1 Query: 1 GRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 G+ +T F ++ L+L AS E SEHPLA+A+V A E G ++ +V+ F A G+G+Q G V +GN +L + GI P + L +T + V +D L G++ +AD +K A ++ L G++ +M TGDN RTA AVA+ +GI +V ADV+P GK + + G+I+AM GDG+ND+PALAAADVG+A+G G D+A Sbjct: 538 GKPKLTDIAAFGRVGEDRLLSLAASLERGSEHPLAEAIVSGA--------------------EERGVPFV-EVTGFEAKTGKGVQGIADGTMVALGNSAMLADLGID-PAALSEKTEALRGDGKTVMFVVFDGALAGLVAVADRIKPTTAAAIQALHDSGLKIIMATGDNERTARAVAKSLGIDEVRADVLPEGKKALIDELRSKGAIIAMAGDGVNDAPALAAADVGIAMGTGADVA 753
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATP7A_RAT (Copper-transporting ATPase 1 OS=Rattus norvegicus GN=Atp7a PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.054e-36 Identity = 100/276 (36.23%), Postives = 144/276 (52.17%), Query Frame = 1 Query: 1 GRATVTTAKVFT---KMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSL-------------------NPDGQSHSKE--------STGSGWLLDVSDFSALPGRG--IQCFISGK------QVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 G V KV K+ R + L +V +AE++SEHPL AV +Y + D +L N +G H S +D + + P I +S +VL+GNR+ + +G+ I + V+ ++E E RT +LV DD L G++ IAD VK EA + V L MG+ V++TGDN +TA ++A ++GI V A+V+P+ K V+ Q++G VAMVGDGINDSPALA A VG+AIG GTD+A Sbjct: 1044 GTPVVNQVKVLVESNKISRNKILAIVGTAESNSEHPLGAAVTKYCKQE--LDTETLGTCTDFQVVPGCGISCKVTNIEGLLHKSNLKIEENNIKNASLVQIDAINEQSSPSSSMIIDAHLSNAVNTQQYKVLIGNREWMIRNGLVISNDVDESMIEHERRGRTAVLVTIDDELCGLIAIADTVKPEAELAVHILKSMGLEVVLMTGDNSKTARSIASQVGITKVFAEVLPSHKVAKVKQLQEEGKRVAMVGDGINDSPALAMASVGIAIGTGTDVA 1317
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPA_VIBCH (Copper-exporting P-type ATPase A OS=Vibrio cholerae GN=copA PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.504e-36 Identity = 86/224 (38.39%), Postives = 132/224 (58.93%), Query Frame = 1 Query: 43 DRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 D + L L + E SEHPLAKA+ +YA+ +++P +++S F+ GRG+ + VLVG+ + E GI + ES + + A T + VAY L GV+ IADP+K +A V L ++G+ VM+TGD+ A+A+A+E+GI V+A V+P KA +++ Q+ G VAM+GDGIND+PALA AD+G+A+G+G+D+A Sbjct: 619 DENQLLALAYALEQQSEHPLAKAICDYAKQ------RNISP---------------VEISQFTNQRGRGLLADYQNQTVLVGSLAFMQEQGIDL-SMAESTLEKFAAQAWTPVAVAYRGMLQGVLAIADPIKPTSAQAVRKLNELGIHTVMLTGDHTSVANAIAKELGISQVIAQVLPDQKAQHIQALQQQGRKVAMIGDGINDAPALALADIGIAMGSGSDVA 820
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATCS_SYNE7 (Cation-transporting ATPase pacS OS=Synechococcus elongatus (strain PCC 7942) GN=pacS PE=3 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 1.020e-35 Identity = 94/227 (41.41%), Postives = 133/227 (58.59%), Query Frame = 1 Query: 43 DRGEFLTLV---ASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 DR + TL+ AS E SEHPLA+A+V Y E+ G L V+DF A+PG G+Q + G + +G ++ L E GI +++ + E + +T + VA D +L ++ IAD +K + VV L ++G++ VM+TGDN RTA A+A+ +GI V+A+V P KA V Q G +VAMVGDGIND+PALA ADVG+AIG GTD+A Sbjct: 454 DRDQQQTLLGWAASLENYSEHPLAEAIVRYG--------------------EAQGIT-LSTVTDFEAIPGSGVQGQVEGIWLQIGTQRWLGELGIET-SALQNQWEDWEAAGKTVVGVAADGHLQAILSIADQLKPSSVAVVRSLQRLGLQVVMLTGDNRRTADAIAQAVGITQVLAEVRPDQKAAQVAQLQSRGQVVAMVGDGINDAPALAQADVGIAIGTGTDVA 658
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: ATCS_SYNY3 (Cation-transporting ATPase pacS OS=Synechocystis sp. (strain PCC 6803) GN=pacS PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.332e-35 Identity = 95/243 (39.09%), Postives = 134/243 (55.14%), Query Frame = 1 Query: 1 GRATVTTAKVFTKMDRGEFLTLV---ASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHV--ESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 G+ +VT + E L L+ AS E SEHPLA+AVV Y GQS LL++ +F A+ G G+ G+ + +G L + G+T +H +S + E+ +T I +A D + ++ IAD +K + VV+ L K+G+ M+TGDN TA A+A +GI+ V+A V P KA V Q+ G+IVAMVGDGIND+PALA ADVG+AIG GTD+A Sbjct: 436 GKPSVTNFFTLSPTSTEESLQLIQWAASVEQYSEHPLAEAVVNY---------------GQSQQVS------LLEIDNFQAIAGCGVAGQWQGQWIRLGTSNWLTDLGVTGTEHQPWQSQAQQWEKEQKTVIWLAVDTEVKALLAIADAIKPSSPQVVQALKKLGLSVYMLTGDNQATAQAIADTVGIRHVLAQVRPGDKAQQVEQLQQKGNIVAMVGDGINDAPALAQADVGIAIGTGTDVA 657
BLAST of FC868756 vs. ExPASy Swiss-Prot
Match: COPA_BACSU (Copper-exporting P-type ATPase A OS=Bacillus subtilis GN=copA PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.739e-35 Identity = 90/240 (37.50%), Postives = 134/240 (55.83%), Query Frame = 1 Query: 1 GRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDH--VESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREIGIQDVMADVMPAGKADAVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIA 714 G+ +T A F + + + L A+AE SEHPL +A++ + D L + ++ F A G GI GK +LVG RKL+ + +H + + + ELE +T +LV+ D G++ +AD +K + V L ++G+ +M+TGDN RTA A+A+E GI +++A+V+P KA + QK+G AMVGDGIND+PALA AD+GMAIG GTDIA Sbjct: 507 GKPRLTDAIPFGRFEEKDLLQFAAAAETGSEHPLGEAIIAGVK------DKGLE---------------IPKLTRFEAKVGAGILAEAGGKSILVGTRKLMESEQV---EHGALLAQMEELEAEGKTVMLVSIDGEAAGLVAVADTIKDTSRKAVARLKELGLDVIMMTGDNRRTAEAIAKEAGIANIIAEVLPEQKAAEIARLQKEGRQTAMVGDGINDAPALATADIGMAIGTGTDIA 722 The following BLAST results are available for this feature:
BLAST of FC868756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868756 ID=FC868756; Name=FC868756; organism=Citrus clementina; type=EST; length=715bpback to top |