FC868763

Overview
NameFC868763
Unique NameFC868763
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC868763_ssr497 microsatellite FC868763_ssr497:497..508. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig7230 contig Ccv1_Contig7230:57..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868763 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12
Identity = 51/190 (26.84%), Postives = 88/190 (46.32%), Query Frame = 2
Query:  155 LGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNNNKICKPIDIGELSISTLVCAMQNMLWGEALELKEKGTT-ILGVELKFKLAELMVLLGTPNISDIFPMLSWLDI 721
            LGT   H     ++  YGP+  L +G+    V S+P   K  ++  D  F+ R P        +   D+ +++YGP W+ LRK     ++   +L     +RK+E+   +  +   + +  +P+ + E+    L  AM NML    L  +  G+      E K  + ELM + G  NI D  P ++W+D+
Sbjct:   53 LGTMP-HVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAM-AESGRHGQPVVVSEM----LTYAMANMLGQVMLSKRVFGSQGSESNEFKDMVVELMTVAGYFNIGDFIPSIAWMDL 236          
BLAST of FC868763 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.745e-12
Identity = 56/235 (23.83%), Postives = 103/235 (43.83%), Query Frame = 2
Query:   26 IITCLVSVLAVVYFAWNVKKSRKANAKXXXXXXXXXXXXXXXFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYR---DPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNNNKICKPIDIGELSISTLVCAMQNMLWGEALELKEKGTTILGVELKFKLAELMVLLGTPNISDIFPMLSWLDI 721
            ++ CLVS +   Y  W     RK + K                L +   H+ F +LS  +GPI +L+LG+  CVV S+    K+ ++  +  F+ R   +  + GL         A++ +GP W+ ++K  + +++S   +D    +R+QE K  I  ++       + +D G+     L+    N++    L  K         E+K  ++ +  L+G  N+SD    L   D+
Sbjct:    6 LLICLVSTIVFAYILW-----RKQSKKNLPPSPKALPIIGHLHLVSPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVF-RKGVAGEAVDFGD----ELMTLSNNIVSRMTLSQKTSENDNQAEEMKKLVSNIAELMGKFNVSDFIWYLKPFDL 230          
BLAST of FC868763 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12
Identity = 35/107 (32.71%), Postives = 60/107 (56.07%), Query Frame = 2
Query:  182 FTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNN 502
            F E +  YGPI  +W G+ L V+VS+  L K+V+++ D   A R    +    +  G D+ W++YGP + K+RK    ++ S   L+A   +R+ EV + +  +YN+
Sbjct:   52 FAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNH 158          
BLAST of FC868763 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12
Identity = 46/166 (27.71%), Postives = 86/166 (51.81%), Query Frame = 2
Query:  170 LHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNNNKICKPIDIGELSISTLVCAMQNMLWGEALELKEKGTTILGVELKFKLAELMVL 667
            LH+ F  LS  YGP+F L  G+ LCVV S+P   KQ+++  +  F  R    A    T+  + +A++ YG  WR ++K  + +++ + S++    LR QE    +R L +N  +  + ++I E  +      +  M+ GEA E ++    +  +  +F +++ + L
Sbjct:   53 LHQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAFNCRIESTAVKKLTY-ESSLAFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLR-LLSNRARAFEAVNITEELLKLTNNVISIMMVGEAEEARDVVRDVTEIFGEFNVSDFIWL 216          
BLAST of FC868763 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12
Identity = 52/187 (27.81%), Postives = 91/187 (48.66%), Query Frame = 2
Query:  173 HKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGL-VATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNNN---KICKPIDIGELSISTLVCAMQNMLWGEALELKEKGTTILGVELKFKLAELMVLLGTPNISDIFPMLSWLDI 721
            H    +L+  YGP+  L +G    +V SSP + +++ R  D  FA R   +    + ++  +D+  S YG  WR+LRK  + +++S  S+ +  ++R++EV N I+ + +       + K I +    I+T         +GE    K K T     E    L +L   +  PNI+D+FP L +L +
Sbjct:   48 HHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSKEGTRINLSKEISLLIYGITT------RAAFGE----KNKNTE----EFIRLLDQLTKAVAEPNIADMFPSLKFLQL 220          
BLAST of FC868763 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12
Identity = 50/183 (27.32%), Postives = 80/183 (43.72%), Query Frame = 2
Query:  173 HKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNNNKICKPIDIGELSISTLVCAMQNMLWGEALELKEKGTTILGVELKFKLAELMVLLGTPNISDIFPMLSWLDI 721
            H+     S  YGPI  L LG    VV+SSP   K+ +R  D   + R    A        + I W      WR L+K     ++S  +LDA  +LR ++V+  +  L N   +  + ID+   S  T    + N L+  +++L    +     E    +  L  + G PN+ D F  + +LD+
Sbjct:   59 HRSLAAFSKTYGPIMSLKLGRLTAVVISSPEAAKEALRTHDHVMSARTFNDALRAFDHHKHSIVWIPPSARWRFLKKTITKYLLSPQNLDAIQSLRMRKVEELV-SLVNEFRERGEAIDLARASFVTSFNIISNALF--SVDLATYDSNSSSYEFHNTVVHLTDIAGIPNVGDYFQYMRFLDL 238          
BLAST of FC868763 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12
Identity = 49/187 (26.20%), Postives = 90/187 (48.13%), Query Frame = 2
Query:  173 HKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNNNKICKPIDIGELSISTLVCAMQNMLWGEALELK----EKGTTILGVELKFKLAELMVLLGTPNISDIFPMLSWLDI 721
            H    +++  YG I  L +G     V S+P   K  ++  D  F+ R P        +   D+ +++YGP W+ LRK     M+   +L+    +R  E+ + ++ + ++ ++  + + + E+    L  AM NM+ G+ +  K    +KG  +   E K  + ELM + G  NI D  P L+W+D+
Sbjct:   54 HVSLAKMAKKYGAIMYLKVGTCGMAVASTPDAAKAFLKTLDINFSNRPPNAGATHLAYNAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSM-SDMSREGQRVVVAEM----LTFAMANMI-GQVMLSKRVFVDKGVEV--NEFKDMVVELMTIAGYFNIGDFIPCLAWMDL 232          
BLAST of FC868763 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12
Identity = 47/189 (24.87%), Postives = 89/189 (47.09%), Query Frame = 2
Query:  173 HKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLV--ATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNNNKICKPIDIGELSISTLVCAMQN-----MLWGEALELKEKGTTILGVELKFKLAELMVLLGTPNISDIFPMLSWLD 718
            H+   +LS  YGP+  L  G+K  +V SS    + +++  D  +A R  P + +V   ++G  D+ +S +G  WR+ +   V  ++SN  + +   +R +E  N I        KI +  D   +++   +C++ N     +  G   + KE G       ++  + + + LLG  N+ D  P L W++
Sbjct:   58 HRSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASR--PKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMI-------GKIRQGCDSSVINLGEHLCSLTNNIISRVALGRTYDEKESG-------IEHIIEQFVELLGIFNVGDYIPRLEWVN 230          
BLAST of FC868763 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12
Identity = 52/236 (22.03%), Postives = 108/236 (45.76%), Query Frame = 2
Query:   26 IITCLVSVLAVVYFAWNVKKSRKANAKXXXXXXXXXXXXXXXFLGTTDLHKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNNNKICKPIDIGELSISTLVCAMQNMLWGEALELKEKGTTILGVELKFKLA----ELMVLLGTPNISDIFPMLSWLDI 721
            +++ L   +A+ +F   + + R+                    LG    H+    L+   GP+  L LG+   ++VS+  + +++++  D  FA R    A     +   D+A+S YG  WR++RK  V +++S   +++  ++R++EV   + +  + +    + +++ EL +      +  + +G+  E +E        E K K A    EL  L+G   + D FP  +W+D+
Sbjct:    4 LVSLLFLAIALTFFLLKLNEKREKKPNLPPSPPNLPIIGNLHQLGNLP-HRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEV-GLMMERISQSCSTGEAVNLSELLLLLSSGTITRVAFGKKYEGEE--------ERKNKFADLATELTTLMGAFFVGDYFPSFAWVDV 229          
BLAST of FC868763 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-11
Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 2
Query:  173 HKKFTELSGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFAYRDPPIAGLVATFGGNDIAWSNYGPEWRKLRKFFVGKMMSNASLDACYALRKQEVKNTI 484
            H+   +L+  YGP+  L LG    VVV+SP + KQV++  D  FA R   +A  +  +   DIA+S YG  WR++RK  + +++S  S+ +  ++R  EV   I
Sbjct:   53 HRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLI 156          
The following BLAST results are available for this feature:
BLAST of FC868763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
C75A5_EUSGR2.102e-1226.84Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C93A1_SOYBN2.745e-1223.83Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C98A2_SOYBN3.586e-1232.71Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C93B1_GLYEC4.683e-1227.71Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C71DC_CATRO4.683e-1227.81Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C76C3_ARATH6.116e-1227.32Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C75A1_PETHY6.116e-1226.20Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C71A2_SOLME7.988e-1224.87Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71A1_PERAE7.988e-1222.03Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71D7_SOLCH1.043e-1135.58Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionC31004E03EF AbioticL1 Citrus clementina cDNA clone C31004E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868763 ID=FC868763; Name=FC868763; organism=Citrus clementina; type=EST; length=721bp
GGATGCCAGAAGCAATGAGAGTTCCATTATCACTTGTTTAGTTTCTGTGC
TTGCCGTGGTTTACTTCGCATGGAATGTGAAAAAATCAAGGAAAGCAAAT
GCTAAACTTCCACCAGGACCTCGCGGCTTGCCTGTAGTCGGATACCTCCC
ATTTCTCGGAACTACTGACTTGCACAAGAAATTCACGGAATTATCCGGAG
TTTATGGTCCGATCTTCAAGCTCTGGCTCGGAAATAAATTATGTGTAGTG
GTGAGCTCACCTTCCCTAGTTAAACAAGTGGTTCGTGATCAAGATACAAC
ATTCGCATACCGTGACCCGCCGATCGCTGGACTAGTGGCCACCTTTGGTG
GCAATGATATTGCATGGTCCAATTACGGTCCCGAATGGAGAAAGTTGCGC
AAATTTTTTGTGGGCAAGATGATGAGTAACGCAAGCCTTGATGCTTGTTA
TGCTCTAAGAAAACAAGAGGTTAAAAATACTATCAGGGATTTGTATAACA
ACAACAACAAAATTTGCAAGCCCATTGACATTGGTGAATTGTCGATTTCA
ACACTGGTATGTGCTATGCAGAACATGCTGTGGGGTGAAGCGCTTGAATT
AAAAGAGAAAGGGACCACTATTCTTGGGGTTGAGCTAAAATTTAAGCTTG
CAGAACTCATGGTGCTACTGGGAACACCGAATATTTCGGATATCTTTCCA
ATGCTTTCATGGCTCGACATA
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