FC868764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_RHOCA (Ribulose-phosphate 3-epimerase OS=Rhodobacter capsulatus GN=cbbE PE=3 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 9.908e-36 Identity = 72/144 (50.00%), Postives = 97/144 (67.36%), Query Frame = 2 Query: 269 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 I ++PSILSA+FA G +++A+E G DW+HVDVMDG FVPN+T GP V A R +DVHLMI + + + +AGAD+++ H E H+HRTL I+ G K+GV +NP T AIE VLD+ D+V +M+VNPGFG Sbjct: 7 IKIAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVAAFRKHVKTVMDVHLMISPVDAYIDAYAQAGADVLTAHVEAGP--HIHRTLQAIRAAGMKSGVAINPGTPAEAIEHVLDIADVVCVMTVNPGFG 148
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_BUCAI (Ribulose-phosphate 3-epimerase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpe PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.883e-35 Identity = 72/143 (50.35%), Postives = 105/143 (73.43%), Query Frame = 2 Query: 275 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 ++PSILSA+FA+LGE +K V AG D IH DVMD +VPN+++GP+++++LR P+DVHLM+ + +P F KAGA ++ H E +T+H+ RTLN IK+ G KAG+ NPAT L+ ++ +L+ +DL+L+MSVNPGFG Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLRNYNITAPIDVHLMVKPVDNLIPQFAKAGATFITFHPE--ATLHIERTLNLIKENGCKAGLAFNPATPLNFLDYILEKLDLILLMSVNPGFG 146
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_SHIFL (Ribulose-phosphate 3-epimerase OS=Shigella flexneri GN=rpe PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35 Identity = 75/144 (52.08%), Postives = 102/144 (70.83%), Query Frame = 2 Query: 272 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D +D++L+MSVNPGFG Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFG 146
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_ECOLI (Ribulose-phosphate 3-epimerase OS=Escherichia coli (strain K12) GN=rpe PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35 Identity = 75/144 (52.08%), Postives = 102/144 (70.83%), Query Frame = 2 Query: 272 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D +D++L+MSVNPGFG Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFG 146
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_ECOL6 (Ribulose-phosphate 3-epimerase OS=Escherichia coli O6 GN=rpe PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35 Identity = 75/144 (52.08%), Postives = 102/144 (70.83%), Query Frame = 2 Query: 272 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D +D++L+MSVNPGFG Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFG 146
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_ECO57 (Ribulose-phosphate 3-epimerase OS=Escherichia coli O157:H7 GN=rpe PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35 Identity = 75/144 (52.08%), Postives = 102/144 (70.83%), Query Frame = 2 Query: 272 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D +D++L+MSVNPGFG Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFG 146
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_HAEIN (Ribulose-phosphate 3-epimerase OS=Haemophilus influenzae GN=rpe PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.187e-34 Identity = 75/144 (52.08%), Postives = 101/144 (70.14%), Query Frame = 2 Query: 272 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 +++PSILSA+ A+LG+ V+ V AG D IH DVMD +VPN+T GP V ALR P+DVHLM+ ++ +PDF KAGA+ ++ H E S H+ R+L I+D G K+G+V NPA LS ++ VLD VD+VL+MSVNPGFG Sbjct: 5 LIAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDYGITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSE--HIDRSLQLIRDCGCKSGLVFNPAMPLSYLDYVLDKVDVVLLMSVNPGFG 146
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_RHORU (Ribulose-phosphate 3-epimerase OS=Rhodospirillum rubrum GN=cbbE PE=3 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.025e-32 Identity = 72/144 (50.00%), Postives = 99/144 (68.75%), Query Frame = 2 Query: 269 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 I ++PS+LSA+FA + + G D +H DVMD +VPN+T+GPLV ALRP T LP+DVHLM + + F +AGAD+++ H E S H+HR++ I+ G KAGV LNPA+ LS ++ +L+ +DLVLIMSVNPGFG Sbjct: 5 IRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPHTSLPIDVHLMTRPVDPLIDSFAEAGADMITFHPEASD--HVHRSVQMIRKRGLKAGVALNPASPLSLLDHILEDLDLVLIMSVNPGFG 146
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_TREPA (Ribulose-phosphate 3-epimerase OS=Treponema pallidum GN=rpe PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.089e-32 Identity = 66/141 (46.81%), Postives = 95/141 (67.38%), Query Frame = 2 Query: 275 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGF 697 ++PS+LSA+F+ L + +E G W+H+DVMDG FVPN+T G V+ LR T LP DVHLM+ P + DF++AGAD ++ H E + +H HR ++ I+ G K G+ L P+T ++A+ VL VDLVL+M+VNPGF Sbjct: 7 LAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHFVPNLTFGAPVLRCLRSKTHLPFDVHLMVSRPADLIEDFVQAGADFLTFHIE--AEVHAHRLIHAIRGRGVKVGISLVPSTPVAALSEVLPFVDLVLVMTVNPGF 145
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_STRCO (Ribulose-phosphate 3-epimerase OS=Streptomyces coelicolor GN=rpe PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.253e-30 Identity = 68/142 (47.89%), Postives = 97/142 (68.31%), Query Frame = 2 Query: 275 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 ++PSILSA+FA+L ++ KAVE G DW+HVDVMD FVPN+T+G VV++L TD PLD HLMI P++ P +++AGA V+ H E ++ R +I+ GA+A + L PAT + E +L +D++LIM+V PGFG Sbjct: 5 INPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDTPLDCHLMIEAPDRWAPQYVEAGAGSVTFHAEAAAA--PVRLAREIRAKGARASMALKPATPVEPYEDLLPELDMLLIMTVEPGFG 142 The following BLAST results are available for this feature:
BLAST of FC868764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868764 ID=FC868764; Name=FC868764; organism=Citrus clementina; type=EST; length=702bpback to top |