FC868764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_YEAST (Ribulose-phosphate 3-epimerase OS=Saccharomyces cerevisiae GN=RPE1 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.905e-24 Identity = 63/157 (40.13%), Postives = 89/157 (56.69%), Query Frame = 2 Query: 272 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP-------------LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 I++PSIL+++FA LG + V AG DW+H+DVMDG FVPNIT+G +V +LR P D H+M+ PE+ V DF K GAD + H E + +HL + IK G KA + P TS+ + + +D+ L+M+V PGFG Sbjct: 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHL---VKLIKSKGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFG 158
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE1_ORYSJ (Ribulose-phosphate 3-epimerase, cytoplasmic isoform OS=Oryza sativa subsp. japonica GN=Os09g0505700 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.306e-23 Identity = 58/145 (40.00%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 275 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV---VDLVLIMSVNPGFG 700 ++PS+LS++FA L + + G DW+H+D+MDG FVPN+TIG V+ +LR T LD HLM+ P V KAGA + H E S + + IK G + GV L P T + + +++ V+LVL+M+V PGFG Sbjct: 9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRD-NWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFG 152
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_CANGA (Ribulose-phosphate 3-epimerase OS=Candida glabrata GN=RPE1 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.143e-22 Identity = 60/159 (37.74%), Postives = 88/159 (55.35%), Query Frame = 2 Query: 272 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP----------------LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 I++PSIL+++FA LG + V +G +W+H+DVMDG FVPNIT+G +V +LR D H+M+ EPE+ V DF KAGAD + H E +T + IK+ G KA + P T + + + +D+ L+M+V PGFG Sbjct: 5 IIAPSILASDFANLGCECHRVINSGAEWLHIDVMDGHFVPNITLGQPIVTSLRRAVPRSQEEEKASGEVARPTAFFDCHMMVEEPEKWVADFAKAGADQFTFHYE--ATKDPLSLVKLIKENGIKAACAIKPGTPVDVLFELAPYLDMALVMTVEPGFG 161
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: ALSE_ECOLI (D-allulose-6-phosphate 3-epimerase OS=Escherichia coli (strain K12) GN=alsE PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.655e-22 Identity = 47/141 (33.33%), Postives = 86/141 (60.99%), Query Frame = 2 Query: 275 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGF 697 +SPS++ + K EQ++ ++ + D+ H+D+MDG FVPN+T+ P V ++ + PLD HLM+ P+ + +AGAD +++H E + R +++I+ K G++LNP T + A++ + D + +M+V+PGF Sbjct: 3 ISPSLMCMDLLKFKEQIEFID-SHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETING-QAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGF 141
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_SCHPO (Ribulose-phosphate 3-epimerase OS=Schizosaccharomyces pombe GN=SPAC31G5.05c PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 55/145 (37.93%), Postives = 86/145 (59.31%), Query Frame = 2 Query: 275 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALR---PVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 ++PS+L+ +FA L ++V + G DW+HVDVMD +FVPN+TIGP+VV A+R + D HLM++EPE+ + AGA + H E +T +++ + G G L P T + I ++ +D+VL+M+V PG G Sbjct: 6 IAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIGPIVVKAMRNHYTKEEAFFDCHLMVIEPERYIDQLADAGASLFCFHYE--ATEKHEEIISRAHEKGMLVGCALKPKTPVEVILPFVEKLDMVLVMTVEPGKG 148
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_ASHGO (Ribulose-phosphate 3-epimerase OS=Ashbya gossypii GN=RPE1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21 Identity = 59/154 (38.31%), Postives = 89/154 (57.79%), Query Frame = 2 Query: 272 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--------TDLP---LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 I++PSIL+++FA L V AG +W+H+DVMDG FVPNIT+GP +V +LR +D P D H+M+ EPE+ V F++ GAD + H E +T + + IK G +A + P T + + + +D+ L+M+V PGFG Sbjct: 5 IIAPSILASDFANLECGCHRVINAGAEWLHIDVMDGHFVPNITLGPPIVKSLRKAVPRVGDKESDKPKAFFDCHMMVAEPEKWVDVFVENGADQFTFHYE--ATKNPLELVKLIKSRGIRAACAIKPDTPVDVLFELAPYLDMALVMTVEPGFG 156
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_PONAB (Ribulose-phosphate 3-epimerase OS=Pongo abelii GN=RPE PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21 Identity = 55/144 (38.19%), Postives = 87/144 (60.42%), Query Frame = 2 Query: 275 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G VV++LR D D+H+M+ +PEQ V AGA+ + H E +T + + I++ G K G+ + P TS+ + + +D+ L+M+V PGFG Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYAFHLE--ATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFG 148
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_HUMAN (Ribulose-phosphate 3-epimerase OS=Homo sapiens GN=RPE PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21 Identity = 55/144 (38.19%), Postives = 87/144 (60.42%), Query Frame = 2 Query: 275 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G VV++LR D D+H+M+ +PEQ V AGA+ + H E +T + + I++ G K G+ + P TS+ + + +D+ L+M+V PGFG Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLE--ATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFG 148
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: RPE_MOUSE (Ribulose-phosphate 3-epimerase OS=Mus musculus GN=Rpe PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20 Identity = 54/144 (37.50%), Postives = 86/144 (59.72%), Query Frame = 2 Query: 275 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G VV++LR D D+H+M+ PEQ V AGA+ + H E +T + + I++ G K G+ + P T++ + + +D+ L+M+V PGFG Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLE--ATENPGALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFG 148
BLAST of FC868764 vs. ExPASy Swiss-Prot
Match: LSRE_SALPA (Putative epimerase lsrE OS=Salmonella paratyphi A GN=lsrE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14 Identity = 49/151 (32.45%), Postives = 81/151 (53.64%), Query Frame = 2 Query: 275 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFG 700 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V+ L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + ++ G+ L PAT L I +L V+++ +++VNPG+G Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVEQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYG 168 The following BLAST results are available for this feature:
BLAST of FC868764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868764 ID=FC868764; Name=FC868764; organism=Citrus clementina; type=EST; length=702bpback to top |