FC868765
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO1D_ORYSJ (Protein argonaute 1D OS=Oryza sativa subsp. japonica GN=AGO1D PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.000e-27 Identity = 80/208 (38.46%), Postives = 105/208 (50.48%), Query Frame = 3 Query: 159 YKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID----RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNF-------------AGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMD--YHPRITLIVAQKRHQTRLF 725 Y LK I E +G+V+QCC + K Q GG N L+D R+P ++F GADV HP +SPSIAAVVA+ +WP +Y V Q HR E I + GM E++ S+ + +PQ II +RDGVSEGQF VL EL ++ A S++ Y P++T IV QKRH TRLF Sbjct: 682 YGDLKRICEIDLGLVSQCCCTKQVFKMN--KQILANLALKINVKVGGRNTVLVDAVSRRIPLVTDRPTIIF-GADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQSHRQELIDDLYNITHDPHRGPICGGMVRELLISFKRSTGQKPQRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEANYQPQVTFIVVQKRHHTRLF 886
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO1C_ORYSJ (Protein argonaute 1C OS=Oryza sativa subsp. japonica GN=AGO1C PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.000e-27 Identity = 82/223 (36.77%), Postives = 112/223 (50.22%), Query Frame = 3 Query: 117 LQILICVMSRKDDG-YKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID----RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNF-------------AGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMD--YHPRITLIVAQKRHQTRLF 725 L +LI ++ + Y LK + E +G+V+QCC + K Q GG N L+D R+P ++F GADV HP +SPSIAAVVA+ +WP +Y V Q HR E I + GM E++ S+ + +PQ II +RDGVSEGQF VL EL ++ A S++ Y P++T IV QKRH TRLF Sbjct: 636 LDLLIGILPDNNGSLYGDLKRVCEIDLGIVSQCCCTKQVFKMN--KQILANLALKINVKVGGRNTVLVDAVSRRIPLVTDRPTIIF-GADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIEDLYKIWQDPQRGTVSGGMIRELLISFKRSTGEKPQRIIFYRDGVSEGQFYQVLLYELNAIRKACASLETNYQPKVTFIVVQKRHHTRLF 855
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO3_MOUSE (Protein argonaute-3 OS=Mus musculus GN=Eif2c3 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.420e-26 Identity = 79/205 (38.54%), Postives = 109/205 (53.17%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ++I ++ K Y +K + +T +G+ TQC N K Q GG N L+ + V+F+GADV HP A + PSIAAVV +++ +RY A VR Q R E I + A M E++ + + + +P II +RDGVSEGQF VL EL+ ++ A S+ DY P IT IV QKRH TRLF Sbjct: 516 LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQT--LSNLCLKINVKLGGINNILVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEIIQDLASMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKDYQPGITYIVVQKRHHTRLF 717
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO3_HUMAN (Protein argonaute-3 OS=Homo sapiens GN=EIF2C3 PE=1 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.420e-26 Identity = 79/205 (38.54%), Postives = 109/205 (53.17%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ++I ++ K Y +K + +T +G+ TQC N K Q GG N L+ + V+F+GADV HP A + PSIAAVV +++ +RY A VR Q R E I + A M E++ + + + +P II +RDGVSEGQF VL EL+ ++ A S+ DY P IT IV QKRH TRLF Sbjct: 516 LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQT--LSNLCLKINVKLGGINNILVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEIIQDLASMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKDYQPGITYIVVQKRHHTRLF 717
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO3_BOVIN (Protein argonaute-3 OS=Bos taurus GN=EIF2C3 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.420e-26 Identity = 79/205 (38.54%), Postives = 109/205 (53.17%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ++I ++ K Y +K + +T +G+ TQC N K Q GG N L+ + V+F+GADV HP A + PSIAAVV +++ +RY A VR Q R E I + A M E++ + + + +P II +RDGVSEGQF VL EL+ ++ A S+ DY P IT IV QKRH TRLF Sbjct: 516 LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQT--LSNLCLKINVKLGGINNILVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEIIQDLASMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKDYQPGITYIVVQKRHHTRLF 717
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO3_CHICK (Protein argonaute-3 OS=Gallus gallus GN=EIF2C3 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26 Identity = 79/205 (38.54%), Postives = 108/205 (52.68%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ++I ++ K Y +K +T +G+ TQC N K Q GG N L+ + V+F+GADV HP A + PSIAAVV +++ +RY A VR Q R E I + A M E++ + + + +P II +RDGVSEGQF VL EL+ ++ A S+ DY P IT IV QKRH TRLF Sbjct: 516 LQLIIVILPGKTPVYAEVKRAGDTLLGMATQCVQVKNVIKTSPQT--LSNLCLKINVKLGGINNILVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEIIQDLASMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKDYQPGITYIVVQKRHHTRLF 717
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO3_DANRE (Protein argonaute-3 OS=Danio rerio GN=eif2c3 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.697e-25 Identity = 78/205 (38.05%), Postives = 108/205 (52.68%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ++I ++ K Y +K + +T +G+ TQC N K Q GG N L+ + V+F+GADV HP A + PSIAAVV +++ +RY A VR Q R E I + A M E++ + + +P II +RDGVSEGQF VL EL+ ++ A S+ +Y P IT IV QKRH TRLF Sbjct: 516 LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQT--LSNLCLKINVKLGGINNILVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEVIQDLASMVRELLIQFYKSTHYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKEYQPGITYIVVQKRHHTRLF 717
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO13_ORYSJ (Protein argonaute 13 OS=Oryza sativa subsp. japonica GN=AGO13 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25 Identity = 81/247 (32.79%), Postives = 124/247 (50.20%), Query Frame = 3 Query: 45 SNVGGLQELLEDVTSRAYKI----GKGHLQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTE-------------KILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMD--YHPRITLIVAQKRHQTRLFP 728 SN ++ L DV SR ++ GKG LQ+LI ++ Y +K + E +G+V+QCCL +A+ + QY N L ++ K + + + ++H ++ SIAAVVA+++WP +Y V Q HR E K++N GM E + ++ + RP+ II +RDGVSEGQF VL E+ ++ A S++ Y P +T +V QKRH TRLFP Sbjct: 442 SNPNNIENALRDVHSRTSELLAREGKGGLQLLIVILLEVSGSYGKIKRVCENDLGIVSQCCLPRHAS--RPNKQYL-------------ENVAL--KINVKKSQQSSLVL---MSHTPPGEDSASSIAAVVASMDWPEITKYRGLVSAQSHRQEIIEDLFSVGKDPVKVVN-GGMIREFLIAFRKKTGRRPERIIFYRDGVSEGQFSRVLLHEMDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFP 667
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO14_ORYSJ (Protein argonaute 14 OS=Oryza sativa subsp. japonica GN=AGO14 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.437e-24 Identity = 81/233 (34.76%), Postives = 113/233 (48.50%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNF--------------------------AGMCLEVVKSYVQLN-KVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMD--YHPRITLIVAQKRHQTRLFP 728 LQ+LI ++ + Y +K + ET++G+V+QC L Q+ GG N+ L L E+ + GADV HP + +S SIAAVVA+++WP +Y A V Q R E I + GM E++ S+ N K +PQ II +RDGVS+GQF VL E+ +K A S+D Y P +T +V QKRH TRLFP Sbjct: 675 LQLLIVILPDVNGYYGRIKRVCETELGIVSQC-LKPGRKLLSLDRQFLENVSLKINVKAGGRNSVLQRPLVPGGLENTTIIFGADVTHPASGEDSSASIAAVVASMDWPEITKYKALVSAQPPRQEIIQDLFTMTEVAQNADAPAQKAEGSKKNFICGGMFRELLMSFYSKNAKRKPQRIIFYRDGVSDGQFLHVLLYEMDAIKKAIASLDPAYRPLVTFVVVQKRHHTRLFP 906
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO1_MOUSE (Protein argonaute-1 OS=Mus musculus GN=Eif2c1 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.460e-24 Identity = 74/205 (36.10%), Postives = 107/205 (52.20%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ++I ++ K Y +K + +T +G+ TQC NA K Q GG N L+ + V+F+GADV HP A + PSI AVV +++ +RY A VR Q R E I + + M E++ + + + +P II +RDGV EGQ +L+ EL+ ++ A + DY P IT IV QKRH TRLF Sbjct: 513 LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNAVKTSPQT--LSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLF 714 The following BLAST results are available for this feature:
BLAST of FC868765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868765 ID=FC868765; Name=FC868765; organism=Citrus clementina; type=EST; length=732bpback to top |