FC868765
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO17_ORYSJ (Protein argonaute 17 OS=Oryza sativa subsp. japonica GN=AGO17 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.131e-24 Identity = 82/242 (33.88%), Postives = 116/242 (47.93%), Query Frame = 3 Query: 60 LQELLEDVTSRAYKIGKGHLQILICVMSRKDDG-YKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELID----RLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNF-------------AGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 L+ L +DV G+ L +LI ++ + Y +K I ET +G+++QCCL+ + K Y GG N L+D RLP+ + ++F GA V HP S SIAAVVA+ +WP +Y + Q E I +GM E + S+ + K +P II +RDGVS+GQ L EL +KMA SM DY+P +T +V QK TRLF Sbjct: 494 LRTLHDDVMDILRPQGR-KLDLLIVILPNNNGSLYGDVKRICETDIGLISQCCLAKHVLKMN--KWYLASVALKINAKMGGRNTVLVDALEMRLPHVRDTPTIVF-GAHVTHPHPGKANSSSIAAVVASQDWPEVTKYAGLISVQACHQESIQGLFKVQDDPERGTTTSGMIKEHLMSFYRATKRKPGRIIFYRDGVSKGQLPQALMHELGAIKMACASMGPDYNPLVTYVVLQKCRHTRLF 731
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO1_HUMAN (Protein argonaute-1 OS=Homo sapiens GN=EIF2C1 PE=1 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.589e-23 Identity = 73/205 (35.61%), Postives = 106/205 (51.71%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ++I ++ K Y +K + +T +G+ TQC N K Q GG N L+ + V+F+GADV HP A + PSI AVV +++ +RY A VR Q R E I + + M E++ + + + +P II +RDGV EGQ +L+ EL+ ++ A + DY P IT IV QKRH TRLF Sbjct: 513 LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQT--LSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLF 714
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO4A_ORYSJ (Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.756e-22 Identity = 81/255 (31.76%), Postives = 120/255 (47.06%), Query Frame = 3 Query: 12 VLSEPASMRLFSNVGGLQELLEDVTSRAYKIGKGHLQILICVMSRKDDGYKYLKWISE--TKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAEL-IDRLPYFKGEDHV--MFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFA---------GMCLEV-VKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMD--YHPRITLIVAQKRHQTRLF 725 V+ E SMR + +++ + + G + L+CV++ + + Y W + + G++TQC T N DQY GG N+ L I+ P V + +G DV+H PSIAAVV++ WP ++Y A VR Q + E I G+ E+ V Y K +P ++I+FRDGVSE QF VLN EL + A + +D + P+ TLIVAQK H T+ F Sbjct: 524 VIEEDPSMRRAPAARRVDGMIDKMQKKL----PGQPKFLLCVLAERKNSDIYGPWKRKCLAEFGIITQCVAPTRVN-----DQYITNVLLKINAKLGGLNSLLQIETSPSIPLVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSREWPLVSKYRASVRSQSPKLEMIDGLFKPQGAQEDDGLIRELLVDFYTSTGKRKPDQVIIFRDGVSESQFTQVLNIELDQIIEACKFLDENWSPKFTLIVAQKNHHTKFF 769
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO4_CHICK (Protein argonaute-4 OS=Gallus gallus GN=EIF2C4 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.675e-22 Identity = 74/215 (34.42%), Postives = 105/215 (48.84%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEK----------ILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ+++ ++ K Y +K + +T +G+ TQC N K Q GG N L+ + V+F+GADV HP A + PSIAAVV +++ +RY A VR Q R E I + M E++ + + + +P II +R GVSEGQ V EL+ ++ A S+ DY P IT IV QKRH TRLF Sbjct: 440 LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQT--LSNLCLKINAKLGGINNVLVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-GHPSRYCATVRVQTSRQETSQELLYSQEVIQDLTNMVRELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEEDYRPGITYIVVQKRHHTRLF 651
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO4_MOUSE (Protein argonaute-4 OS=Mus musculus GN=Eif2c4 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.717e-22 Identity = 73/215 (33.95%), Postives = 105/215 (48.84%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHR----------TEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ+++ ++ K Y +K + +T +G+ TQC N K Q GG N L+ + V+F+GADV HP A + PSIAAVV +++ +RY A VR Q R E + + M E++ + + + +P II +R GVSEGQ V EL+ ++ A S+ DY P IT IV QKRH TRLF Sbjct: 507 LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQT--LSNLCLKMNAKLGGINNVLVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-GHPSRYCATVRVQTSRQEITQELLYSQEVVQDLTSMARELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEEDYRPGITYIVVQKRHHTRLF 718
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO4_HUMAN (Protein argonaute-4 OS=Homo sapiens GN=EIF2C4 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.717e-22 Identity = 74/215 (34.42%), Postives = 105/215 (48.84%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHR----------TEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ+++ ++ K Y +K + +T +G+ TQC N K Q GG N L+ + V+F+GADV HP A + PSIAAVV +++ +RY A VR Q R E I + M E++ + + + +P II +R GVSEGQ V EL+ ++ A S+ DY P IT IV QKRH TRLF Sbjct: 507 LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQT--LSNLCLKINAKLGGINNVLVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-GHPSRYCATVRVQTSRQEISQELLYSQEVIQDLTNMVRELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEEDYRPGITYIVVQKRHHTRLF 718
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO1_SCHPO (Protein argonaute OS=Schizosaccharomyces pombe GN=ago1 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.717e-22 Identity = 72/227 (31.72%), Postives = 112/227 (49.34%), Query Frame = 3 Query: 54 GGLQELLEDVTSRAYKIGKGHLQILICVMSRKD-DGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMD--YHPRITLIVAQKRHQTRLF 725 G ++EL + +A ++G L ++ + + Y +K + T +GV +QC +S + + K QY GG N LI + G + +G DV HPG T SIA++VA+V+ +Y A R Q E I + + +++ + + K +PQ II FRDG SEGQF V+N+EL +K A S+ Y+P+I + QKRH R F Sbjct: 477 GSVEELCITLYKKAEQVGNAPPDYLFFILDKNSPEPYGSIKRVCNTMLGVPSQCAISKHILQSK--PQYCANLGMKINVKVGGINCSLIPKSNPL-GNVPTLILGGDVYHPGVG-ATGVSIASIVASVDLNGC-KYTAVSRSQPRHQEVIEGMKDIVVYLLQGFRAMTKQQPQRIIYFRDGTSEGQFLSVINDELSQIKEACHSLSPKYNPKILVCTTQKRHHARFF 698
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO4_XENLA (Protein argonaute-4 OS=Xenopus laevis GN=eif2c4 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.139e-21 Identity = 74/215 (34.42%), Postives = 105/215 (48.84%), Query Frame = 3 Query: 117 LQILICVMSRKDDGYKYLKWISETKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELIDRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEK----------ILNFAGMCLEVVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSM--DYHPRITLIVAQKRHQTRLF 725 LQ+++ ++ K Y +K + +T +G+ TQC N K Q GG N L+ + V+F+GADV HP A + PSIAAVV +++ +RY A VR Q R E I + M E++ + + + +P II +R GVSEGQ V EL+ ++ A S+ DY P IT IV QKRH TRLF Sbjct: 530 LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQT--LSNLCLKINAKLGGINNVLVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-GHPSRYCATVRVQTSRQETTQELLYSQEVIQDLCNMVRELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELMAIRKACISLEEDYRPGITYIVVQKRHHTRLF 741
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO16_ORYSJ (Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.139e-21 Identity = 78/256 (30.47%), Postives = 126/256 (49.22%), Query Frame = 3 Query: 12 VLSEPASMRLFSNVGGLQELLEDVTSRAYKIGKGHLQILICVMSRKDDGYKYLKWISET--KVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAELI----DRLPYFKGEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFA---------GMCLEVVKSYVQLNKVR-PQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMDYH--PRITLIVAQKRHQTRLF 725 ++ E + R + V ++ + E V + G + L+CV+ + + Y W + ++G++TQC + + K DQY GG N++L +P + + +G DV+H PSIAAVV + WP +RY A VR Q + E I + G+ E++ + + ++ R P++II+FRDGVSE QF VLN EL + A++ MD P+ T+I+AQK H T+LF Sbjct: 502 LVDEDSQSRRCTPVVRVESMFEKVKANL----PGPPEFLLCVLPERKNCDLYGPWKKKNLHEMGIITQCIVPSV----KMNDQYYTNVLLKINAKLGGMNSKLSLEHRHMIPIVN-QTPTLILGMDVSHGSPGRADVPSIAAVVGSRCWPLISRYRASVRTQSPKVEMIDSLFKPLDDGKDDGIIRELLLDFYKTSQQRKPKQIIIFRDGVSESQFSQVLNVELNQIIKAYQYMDQGPIPKFTVIIAQKNHHTKLF 748
BLAST of FC868765 vs. ExPASy Swiss-Prot
Match: AGO4B_ORYSJ (Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.247e-20 Identity = 76/254 (29.92%), Postives = 117/254 (46.06%), Query Frame = 3 Query: 12 VLSEPASMRLFSNVGGLQELLEDVTSRAYKIGKGHLQILICVMSRKDDGYKYLKWISE--TKVGVVTQCCLSTNANKGKGQDQYXXXXXXXXXXXXGGSNAEL-IDRLPYFK--GEDHVMFVGADVNHPGASNKTSPSIAAVVATVNWPAANRYVARVRPQDHRTEKILNFA--------GMCLE-VVKSYVQLNKVRPQEIIVFRDGVSEGQFDMVLNEELVPLKMAFRSMD--YHPRITLIVAQKRHQTRLF 725 V E S+R + ++ E + S+ G + L+C++ + + Y W + + G+VTQC N DQY GG N+ L I+ P + + +G DV+H PSIAAVV++ WP ++Y A V Q + E + + G+ E ++ Y K +P +IVFRDGVSE QF V+N EL + A + +D + P+ T+IVAQK H T+ F Sbjct: 532 VFEESPSLRRAPVSRRVDDMFEQIKSKL----PGAPKFLLCLLPERKNCEVYGPWKRKCLAEFGIVTQCLAPQRVN-----DQYLLNLLLKINAKLGGINSLLQIEASPSIPLVSKTPTIILGMDVSHGQPGQSDRPSIAAVVSSRQWPLISKYRASVHTQSPKLEMMSSLFKPRGTEDDGLIRESLIDFYTSSGKRKPDHVIVFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFF 776 The following BLAST results are available for this feature:
BLAST of FC868765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868765 ID=FC868765; Name=FC868765; organism=Citrus clementina; type=EST; length=732bpback to top |