FC868767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: SXL_DROSU (Protein sex-lethal OS=Drosophila subobscura GN=Sxl PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 46/127 (36.22%), Postives = 67/127 (52.76%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 560 GP+ + +D T GY FV+F SE D+ AIKVLN I + K ++V+ A +S+ NL++ NL + + L F +G IV I+RD TG RG F+ Y+ E + AI A+N Sbjct: 151 GPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIK-DTNLYVTNLPRTITDDQLDTIFGKYGSIV-QKNILRDKLTGRPRGVAFVRYNKREEAQEAISALN 275
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: SXL_DROME (Protein sex-lethal OS=Drosophila melanogaster GN=Sxl PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 46/127 (36.22%), Postives = 67/127 (52.76%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 560 GP+ + +D T GY FV+F SE D+ AIKVLN I + K ++V+ A +S+ NL++ NL + + L F +G IV I+RD TG RG F+ Y+ E + AI A+N Sbjct: 149 GPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIK-DTNLYVTNLPRTITDDQLDTIFGKYGSIV-QKNILRDKLTGRPRGVAFVRYNKREEAQEAISALN 273
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: RBM23_HUMAN (Probable RNA-binding protein 23 OS=Homo sapiens GN=RBM23 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 52/169 (30.77%), Postives = 83/169 (49.11%), Query Frame = 3 Query: 138 PRLLRSYFGSCFQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGAN-----------LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 611 PR L +F + G V +V + DR + +G +VEF + AI + +L G PI V + +K L AN L++G+L ++ E +L F FG I N +M+D DTG S+G+GFI++ E + A+E +NG L R + V + ++ Sbjct: 179 PRDLEDFFSA---VGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQ-RLLGVPIIVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKI-DNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTER 342
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: ROC2_NICPL (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 53/179 (29.61%), Postives = 87/179 (48.60%), Query Frame = 3 Query: 174 QAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKK---------------------------------SLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 611 +AG V V V D+++ +G+GFV ++E+ + A + N ++ G+ IRVN K S+D +++GNL VD+ L + FS G +V + K++ D D+G SRGFGF++Y S + + AI+++NG L R I VS A ++ Sbjct: 110 RAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVV-DAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEER 287
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: PU60B_DANRE (Poly(U)-binding-splicing factor PUF60-B OS=Danio rerio GN=puf60b PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 44/146 (30.14%), Postives = 77/146 (52.74%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANL----------FIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN-----GQYL 572 GP+ ++ + D VT H+G+ FVE+ E A A++ +N + L G+ I+V + ++ + L ++ ++ PD+ + + F AFG I + + R+P TG +GFGFI Y+ ++S A+ +MN GQYL Sbjct: 110 GPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPGSIGQAQPIIEQLAEEARAYNRIYVASIHPDLSDDDIKSVFEAFGKI-KSCMLAREPTTGKHKGFGFIEYEKPQSSLDAVSSMNLFDLGGQYL 254
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: SXL_MEGSC (Sex-lethal homolog OS=Megaselia scalaris GN=SXL PE=2 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12 Identity = 47/127 (37.01%), Postives = 66/127 (51.97%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 560 GP+ + +D T GYGFV+F SE DA AI LN I + K I+V+ A + L NL++ NL + ++ L F +G IV I+RD TG RG FI ++ E + AI A+N Sbjct: 102 GPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSFARPGGEQLR-DTNLYVTNLSRSITDEQLETIFGKYGQIV-QKNILRDKHTGTPRGVAFIRFNKREEAQEAISALN 226
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: NSR1_YEAST (Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12 Identity = 44/166 (26.51%), Postives = 90/166 (54.22%), Query Frame = 3 Query: 180 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD--------KKSLDVGAN----LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKDTKGERHGT 638 G V+ V +R T+ +GYG+V+F ++ A+ AI+ + ++ G+PI + ++ KK D + LF+GNL + D +++ F+ G +V+ +I P+T +GFG++ + + E + A++A+ G+Y+ NR + + ++ + + G R G+ Sbjct: 192 GGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVS-VRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSSPRPNNDGGRGGS 356
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: ELV1A_XENLA (ELAV-like protein 1-A OS=Xenopus laevis GN=elavl1-A PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12 Identity = 55/165 (33.33%), Postives = 83/165 (50.30%), Query Frame = 3 Query: 147 LRSYFGSCFQAGPVVNVYVPKDRVTNLHQ-----------GYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL--CNRQITVSYA 602 LRS F S G V + + +D+V GYGFV + + +DA+ AI LN ++L K I+V+ A +S+ ANL+I L + +K + D F FG I+ N +++ D TG SRG FI +D ++ AI + NG + ITV +A Sbjct: 36 LRSLFSSI---GEVESAKLIRDKVAGFEMRSSSLSKGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSFARPSSESIK-DANLYISGLPRTMTQKDVEDMFLPFGHII-NSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFA 195
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: SXL_MUSDO (Sex-lethal homolog OS=Musca domestica GN=SXL PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 49/140 (35.00%), Postives = 72/140 (51.43%), Query Frame = 3 Query: 141 RLLRSYFGSCFQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 560 R L + F +C GP+ + KD T GY FV+F SE DA AIK +N I + K ++V+ A +S+ NL++ NL + + L F +G IV I+RD TG RG F+ ++ E + AI A+N Sbjct: 116 RELYALFRTC---GPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRNKRLKVSYARPGGESIK-DTNLYVTNLPRTITDDELEKIFGKYGNIV-QKNILRDKLTGRPRGVAFVRFNKREEAQEAISALN 250
BLAST of FC868767 vs. ExPASy Swiss-Prot
Match: SXL_CHRRU (Sex-lethal homolog OS=Chrysomya rufifacies GN=SXL PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 49/140 (35.00%), Postives = 72/140 (51.43%), Query Frame = 3 Query: 141 RLLRSYFGSCFQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 560 R L + F +C GP+ + KD T GY FV+F SE DA AIK LN + + K ++V+ A +S+ NL++ NL + + L F +G IV I+RD TG RG F+ ++ E + AI A+N Sbjct: 99 RELYALFRTC---GPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKRLKVSYARPGGESIK-DTNLYVTNLPRTITDDELEKIFGKYGNIV-QKNILRDKLTGKPRGVAFVRFNKREEAQEAISALN 233 The following BLAST results are available for this feature:
BLAST of FC868767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 126
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868767 ID=FC868767; Name=FC868767; organism=Citrus clementina; type=EST; length=704bpback to top |