FC868781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868781 vs. ExPASy Swiss-Prot
Match: PORA_WHEAT (Protochlorophyllide reductase A, chloroplastic OS=Triticum aestivum GN=PORA PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.178e-61 Identity = 127/213 (59.62%), Postives = 155/213 (72.77%), Query Frame = 3 Query: 99 VPSAFSVPKEGKT--SASFKDSSLF-GVSFSEHAKADFSSSALRCKREFSQRNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKQSDYPS 728 +PS SVPK+G + +A+ KD++ F GVS +KA +S A+R + V A + T SP + P GKKTLR+G V+ITGASSGLGLA AKALAETGKWH++MACRDFLKA +AAK+AGMA +YT+MHLDLASLDSVRQFVD FRR+ PLDVLVCNAA+Y PTA+ PTFTA+G E+SVG NHLGHF ++SDYPS Sbjct: 6 LPSTLSVPKKGSSMGAAAVKDTAAFLGVS----SKAKKASLAVRTQ--------VATAPSSVTTSPGSATAKPSGKKTLRQGVVVITGASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQKSDYPS 206
BLAST of FC868781 vs. ExPASy Swiss-Prot
Match: POR_MARPA (Protochlorophyllide reductase, chloroplastic OS=Marchantia paleacea GN=PORA PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.908e-52 Identity = 107/179 (59.78%), Postives = 129/179 (72.07%), Query Frame = 3 Query: 150 KDSSLFGVSFSEHAKADFSSSALRCKR---EFSQRNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHF 677 K+S+ G+ E AK F + L + GV+ A +PA ++ P KKT K + IITGASSGLGLATAKALA+TG+WH+IMACRDFLKAERAA+S G+ K++YT++H DLAS DSVR FVD FRR+ R LDVLVCNAAVY PT KEP F+AEGFELSVGTNH+GHF Sbjct: 86 KESAFLGLRMGEVAK--FGGALLSVSTVAANLKSKPGVLSVN--AVTAPAETMNKPSSKKTATKSTCIITGASSGLGLATAKALADTGEWHVIMACRDFLKAERAARSVGIPKDSYTVIHCDLASFDSVRAFVDNFRRTERQLDVLVCNAAVYFPTDKEPKFSAEGFELSVGTNHMGHF 260
BLAST of FC868781 vs. ExPASy Swiss-Prot
Match: POR_AVESA (Protochlorophyllide reductase (Fragment) OS=Avena sativa PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 7.162e-51 Identity = 96/130 (73.85%), Postives = 110/130 (84.62%), Query Frame = 3 Query: 339 VIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKQSDYPS 728 V+ITGASSGLGLA AKALAETGKWH++MACRDFLKA +AAK+AGMA +YT+MHLDLASLDSVRQFVD FRR+ PLDVLVCNAA+Y PTA++PTFTAEG E+SVG NHLGHF ++SDYPS Sbjct: 2 VVITGASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARKPTFTAEGVEMSVGVNHLGHFLLARLLLEDLQKSDYPS 131
BLAST of FC868781 vs. ExPASy Swiss-Prot
Match: POR_CHLRE (Protochlorophyllide reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PORA PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.678e-47 Identity = 106/196 (54.08%), Postives = 131/196 (66.84%), Query Frame = 3 Query: 105 SAFSVPKEGKTSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQRNGVVRAQTMATASPAV-DVSSPQG----KKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHF 677 SA SV + S+ + + VS ++ + AL + ++ VV A T SP++ D P T +K + IITGASSGLGL AKALA TG+WH++MACRDFLKAE+AAK GM +Y+I+HLDL+SL+SVRQFV F+ SGR LD LVCNAAVYLPTAKEP FTA+GFELSVGTNHLGHF Sbjct: 6 SAKSVSARAQVSSKAQAAPAVAVSGRTSSRV-MPAPALAARSSVARTPLVVCAATATAPSPSLADKFKPNAIARVPATQQKQTAIITGASSGLGLNAAKALAATGEWHVVMACRDFLKAEQAAKKVGMPAGSYSILHLDLSSLESVRQFVQNFKASGRRLDALVCNAAVYLPTAKEPRFTADGFELSVGTNHLGHF 200
BLAST of FC868781 vs. ExPASy Swiss-Prot
Match: POR_PLEBO (Light-dependent protochlorophyllide reductase OS=Plectonema boryanum GN=por PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.713e-36 Identity = 73/117 (62.39%), Postives = 93/117 (79.49%), Query Frame = 3 Query: 327 RKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHF 677 +K +V+ITGASSG+GL AKAL + G WH++MACR+ KA+ AAKS GM+ ++YT+MH+DL SLDSVR+FV FR SG+ LD LVCNAAV++P KEP + EG+ELSV TNH GHF Sbjct: 5 QKPTVVITGASSGVGLYAAKALVKRG-WHVVMACRNLEKADSAAKSLGMSPDSYTLMHIDLGSLDSVRKFVTQFRESGKSLDALVCNAAVHMPLLKEPMRSPEGYELSVATNHFGHF 120
BLAST of FC868781 vs. ExPASy Swiss-Prot
Match: POR_SYNY3 (Light-dependent protochlorophyllide reductase OS=Synechocystis sp. (strain PCC 6803) GN=por PE=3 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.559e-32 Identity = 70/116 (60.34%), Postives = 85/116 (73.28%), Query Frame = 3 Query: 330 KGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHF 677 K +VIITGASSG+GL AKAL + G WH+IMACR+ K ++ A G K++YTI+ LDL LDSVR+FV FR GRPL LVCNAAVY P EP ++A+ +ELSV TNHLGHF Sbjct: 6 KPTVIITGASSGVGLYGAKALIDKG-WHVIMACRNLDKTQKVADELGFPKDSYTIIKLDLGYLDSVRRFVAQFRELGRPLKALVCNAAVYFPLLDEPLWSADDYELSVATNHLGHF 120
BLAST of FC868781 vs. ExPASy Swiss-Prot
Match: WWOX_DANRE (WW domain-containing oxidoreductase OS=Danio rerio GN=wwox PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.507e-16 Identity = 51/115 (44.35%), Postives = 72/115 (62.61%), Query Frame = 3 Query: 339 VIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAK--SAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHF 677 +I+TGA+SG+G TA++ A G H+I+ACR+ +A +AA +K ++ LDLASL SVRQF + F+ + PL VLVCNAAV ++ T +GFE + HLGHF Sbjct: 124 IIVTGANSGIGFETARSFALHGA-HVILACRNQSRASKAASLIMGEWSKARVEVLPLDLASLRSVRQFAELFKATKLPLHVLVCNAAV---CSQPWRLTEDGFESTFQICHLGHF 234
BLAST of FC868781 vs. ExPASy Swiss-Prot
Match: RDH13_HUMAN (Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.480e-16 Identity = 54/124 (43.55%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 315 KKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTI--MHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAE-GFELSVGTNHLGHF 677 K T+ +VI+TGA++G+G TA LA G +II+ACRD K E AAK N+ + HLDLASL S+R+F +D+L+ NA V + P +T E GFE+ G NHLGHF Sbjct: 33 KATIPGKTVIVTGANTGIGKQTALELARRGG-NIILACRDMEKCEAAAKDIRGETLNHHVNARHLDLASLKSIREFAAKIIEEEERVDILINNAGV----MRCPHWTTEDGFEMQFGVNHLGHF 151
BLAST of FC868781 vs. ExPASy Swiss-Prot
Match: WWOX_HUMAN (WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.842e-15 Identity = 49/115 (42.61%), Postives = 65/115 (56.52%), Query Frame = 3 Query: 339 VIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSA--GMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHF 677 V++TGA+SG+G TAK+ A G H+I+ACR+ +A A K M LDLA L SV+ F + F+ PL VLVCNAA + A + T +G E + NHLGHF Sbjct: 127 VVVTGANSGIGFETAKSFALHGA-HVILACRNMARASEAVSRILEEWHKAKVEAMTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATF---ALPWSLTKDGLETTFQVNHLGHF 237
BLAST of FC868781 vs. ExPASy Swiss-Prot
Match: RDH11_HUMAN (Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 6.332e-15 Identity = 55/154 (35.71%), Postives = 79/154 (51.30%), Query Frame = 3 Query: 297 VSSPQGKKTLRKGS-----------VIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIM--HLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYL-PTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKQS 716 +++PQ +K L G V++TGA++G+G TAK LA+ G + +ACRD K E AK N ++ LDL+ S+R F F + L VL+ NA V + P +K TA+GFE+ +G NHLGHF K+S Sbjct: 19 MAAPQIRKMLSSGVCTSTVQLPGKVVVVTGANTGIGKETAKELAQRGA-RVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSK----TADGFEMHIGVNHLGHFLLTHLLLEKLKES 167 The following BLAST results are available for this feature:
BLAST of FC868781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868781 ID=FC868781; Name=FC868781; organism=Citrus clementina; type=EST; length=749bpback to top |