FC868785

Overview
NameFC868785
Unique NameFC868785
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA11_ARATH (ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 7.773e-36
Identity = 70/118 (59.32%), Postives = 78/118 (66.10%), Query Frame = 2
Query:  281 GDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            GDK   LE +  E+VDLE +PIEEVFE L+CSREGLT++    RL +FG N              GFMWNPLSWVME          NGGG+ PDWQDFVGII LLVINSTISFIEEN
Sbjct:    2 GDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEEN 119          

HSP 2 Score: 31.9574 bits (71), Expect = 7.773e-36
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3
Query:  684 KVLRDGRWSEQDASI 728
            KVLRDGRW EQDA+I
Sbjct:  137 KVLRDGRWGEQDAAI 151          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA1_NICPL (Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.094e-34
Identity = 67/120 (55.83%), Postives = 78/120 (65.00%), Query Frame = 2
Query:  275 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            MG +K   L+ +  E+VDLE IPIEEVFE L+C++EGLT+     RL +FG N              GFMWNPLSWVME          NGGG+ PDWQDFVGII LL+INSTISFIEEN
Sbjct:    1 MGEEKPEVLDAVLKEAVDLENIPIEEVFENLRCTKEGLTATAAQERLAIFGYNKLEEKKDSKLLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEEN 120          

HSP 2 Score: 30.4166 bits (67), Expect = 4.094e-34
Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 3
Query:  684 KVLRDGRWSEQDASI 728
            KVLRDGRW E+DA++
Sbjct:  138 KVLRDGRWKEEDAAV 152          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA4_ARATH (ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 5.332e-34
Identity = 66/112 (58.93%), Postives = 74/112 (66.07%), Query Frame = 2
Query:  299 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            LE +  E+VDLE +PIEEVFE L+CS+EGLT+     RL +FG N              GFMWNPLSWVME          NGGG+ PDWQDFVGII LLVINSTISFIEEN
Sbjct:   12 LEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEEN 123          

HSP 2 Score: 31.9574 bits (71), Expect = 5.332e-34
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 3
Query:  684 KVLRDGRWSEQDASI 728
            KVLRDGRW EQDA+I
Sbjct:  141 KVLRDGRWGEQDAAI 155          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA3_NICPL (Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.534e-33
Identity = 66/118 (55.93%), Postives = 77/118 (65.25%), Query Frame = 2
Query:  281 GDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            G+K   L+ +  E+VDLE IPIEEVFE L+C++EGLT+     RL +FG N              GFMWNPLSWVME          NGGG+ PDWQDFVGII LL+INSTISFIEEN
Sbjct:    2 GEKPEVLDAVLKETVDLENIPIEEVFENLRCTKEGLTATAAQERLSIFGYNKLEEKKESKFSKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEEN 119          

HSP 2 Score: 29.261 bits (64), Expect = 1.534e-33
Identity = 10/15 (66.67%), Postives = 14/15 (93.33%), Query Frame = 3
Query:  684 KVLRDGRWSEQDASI 728
            KVLRDG+W E+DA++
Sbjct:  137 KVLRDGKWKEEDAAV 151          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA1_SOLLC (Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.534e-33
Identity = 66/117 (56.41%), Postives = 76/117 (64.96%), Query Frame = 2
Query:  284 DKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            +K   L+ +  E+VDLE IPIEEVFE L+C+REGLT+     RL +FG N              GFMWNPLSWVME          NGGG+ PDWQDFVGII LL+INSTISFIEEN
Sbjct:    3 EKPEVLDAVLKETVDLENIPIEEVFENLRCTREGLTATAAQERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEEN 119          

HSP 2 Score: 30.4166 bits (67), Expect = 1.534e-33
Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 3
Query:  684 KVLRDGRWSEQDASI 728
            KVLRDG+W E+DAS+
Sbjct:  137 KVLRDGKWDEEDASV 151          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA7_ARATH (ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=AHA7 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.706e-29
Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 2
Query:  296 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            +L+ I  ES+DLE +P+EEVF+ LKC++EGLTS+E   RL +FG N              GFMWNPLSWVME          +GGG+  D+ DFVGI+VLL+INSTISF+EEN
Sbjct:    6 ALKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVEEN 118          

HSP 2 Score: 23.8682 bits (50), Expect = 7.706e-29
Identity = 8/14 (57.14%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  684 KVLRDGRWSEQDAS 725
            K +RDG+W+E DA+
Sbjct:  136 KAVRDGKWNEIDAA 149          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA10_ARATH (ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=AHA10 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 2.099e-25
Identity = 50/111 (45.05%), Postives = 63/111 (56.76%), Query Frame = 2
Query:  302 EEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            +    + +DL  +P+EEVFE L+ S +GL S +   RL +FGPN              GFMWNPLSWVME          N     PDW+DF GI+ LL+IN+TISF EEN
Sbjct:   13 DTFNRKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQENRFVKFLGFMWNPLSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFEEN 123          

HSP 2 Score: 32.3426 bits (72), Expect = 2.099e-25
Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  681 TKVLRDGRWSEQDASI 728
            T+VLRDG+W EQDASI
Sbjct:  140 TRVLRDGQWQEQDASI 155          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMAX_ARATH (Putative ATPase, plasma membrane-like OS=Arabidopsis thaliana GN=At4g11730 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.862e-21
Identity = 53/123 (43.09%), Postives = 73/123 (59.35%), Query Frame = 2
Query:  296 SLEEIKNE-SVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPN-XXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEE----NMLAM 646
            SLE+IK E   DLE+IPIEEVF++L+CSREGL+  EG  RL +FGPN                 M+ PLSWV++          NG GR    Q F+GI+ LL++N+ I +++E    N++AM
Sbjct:    6 SLEDIKIEIDDDLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSWVIQAAAIMAMLFANGDGR----QLFLGIVCLLIVNTIICYLKEDDAANVVAM 124          

HSP 2 Score: 33.8834 bits (76), Expect = 7.862e-21
Identity = 14/16 (87.50%), Postives = 16/16 (100.00%), Query Frame = 3
Query:  681 TKVLRDGRWSEQDASI 728
            TKVLRDG+WSEQ+ASI
Sbjct:  133 TKVLRDGKWSEQEASI 148          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA1_DUNAC (Plasma membrane ATPase OS=Dunaliella acidophila GN=DHA1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.339e-13
Identity = 43/122 (35.25%), Postives = 58/122 (47.54%), Query Frame = 2
Query:  269 STMGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            S   GDK +       + VD  +I +E+ F+ L CS  GL+  E   RL   GPN              G+MWNPL+W ME          +G        DF  I+ LL+IN+TISF+EE+
Sbjct:   24 SADNGDKGV-------DEVDFAKIGLEDAFKYLNCSEHGLSGAEAEARLKQHGPNKLPDNSRNPVLVYFGYMWNPLAWAMEAAAIIAIALVDGA-------DFALIVGLLIINATISFVEES 131          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA1_DUNBI (Plasma membrane ATPase OS=Dunaliella bioculata GN=PMA1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12
Identity = 39/106 (36.79%), Postives = 54/106 (50.94%), Query Frame = 2
Query:  317 ESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            + VD  +I +++ F+ L C++ GL+S E A RL   GPN              G+MWNPL+W ME                 D  DFV I+ LL+IN+ ISF EE+
Sbjct:   30 DEVDFAKITLDDAFKYLNCNKHGLSSAEAAARLQQHGPNKLPDSSRNPVLVFLGYMWNPLAWAMEAAAIISIALL-------DVADFVLIVGLLLINAIISFYEES 128          
The following BLAST results are available for this feature:
BLAST of FC868785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PMA11_ARATH7.773e-3659.32ATPase 11, plasma membrane-type OS=Arabidopsis tha... [more]
PMA1_NICPL4.094e-3455.83Plasma membrane ATPase 1 OS=Nicotiana plumbaginifo... [more]
PMA4_ARATH5.332e-3458.93ATPase 4, plasma membrane-type OS=Arabidopsis thal... [more]
PMA3_NICPL1.534e-3355.93Plasma membrane ATPase 3 OS=Nicotiana plumbaginifo... [more]
PMA1_SOLLC1.534e-3356.41Plasma membrane ATPase 1 OS=Solanum lycopersicum G... [more]
PMA7_ARATH7.706e-2953.10ATPase 7, plasma membrane-type OS=Arabidopsis thal... [more]
PMA10_ARATH2.099e-2545.05ATPase 10, plasma membrane-type OS=Arabidopsis tha... [more]
PMAX_ARATH7.862e-2143.09Putative ATPase, plasma membrane-like OS=Arabidops... [more]
PMA1_DUNAC7.339e-1335.25Plasma membrane ATPase OS=Dunaliella acidophila GN... [more]
PMA1_DUNBI8.115e-1236.79Plasma membrane ATPase OS=Dunaliella bioculata GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31004G05EF AbioticL1 Citrus clementina cDNA clone C31004G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868785 ID=FC868785; Name=FC868785; organism=Citrus clementina; type=EST; length=728bp
GAATTGAAGCCAGTGTTCTCATTTTCTCAAATCGAATCACCAAACCAAAA
ACGACATTCATTTCACCAAAATTAAAAAATTCAATGCCCGTGGTACAAAA
TTTTCTTTTGTTAGACTTTTAATCAAGATGTCATCTTCGATTATGACTCT
CTGAGAAATTTCGCTTAGTCATTTTTATATATATTTTTAGAATATCCTCA
AATTTTACGTATATATAAATCGTTCACTCTTGCAAAGGAATTGTAAGAAA
CTCACAGTTGCTTGAGCTTCTACGATGGGCGGCGATAAGGCCATCAGCCT
CGAGGAAATCAAAAACGAGTCCGTTGATCTGGAACGGATTCCTATAGAGG
AAGTTTTTGAGCAGCTAAAATGTTCAAGAGAAGGTCTGACTTCGGACGAA
GGAGCCCACAGGCTTCATGTTTTTGGCCCCAACAAACTAGAAGAGAAAAA
GGAAAGCAAAGTCCTCAAGTTTTTGGGATTTATGTGGAATCCTTTGTCGT
GGGTCATGGAAGCTGCTGCCATTATGGCTATTGCCTTGGCCAATGGTGGT
GGAAGGGATCCTGATTGGCAGGATTTTGTTGGTATCATTGTCTTGTTGGT
AATCAACTCCACAATCAGCTTTATTGAAGAAAACATGCTGGCAATGCAGC
AGCAGCTCTCATGGCTAATCTGGCTCCTAAACTAAGGTTCTGAGAGATGG
CCGATGGAGTGAGCAAGATGCCTCGATT
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