FC868797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_BIFAA (Serine hydroxymethyltransferase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=glyA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.961e-33 Identity = 76/160 (47.50%), Postives = 101/160 (63.12%), Query Frame = 1 Query: 208 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 687 NAP+ DPEIA+I++ E +RQ GLE+I SENF +V+QA GSV+TNKY+EGYPG RYYGG E +D E++ ++RA F + NVQ SG+ +N VY AL+KP D ++ L L HGGHL+HG KI+ F+ Y +N T ID Sbjct: 15 NAPIAEADPEIAEILDAELSRQQNGLEMIASENFVPRAVLQAQGSVLTNKYAEGYPGRRYYGGCEQVDKIETIARERAKSLFGAE----YANVQPHSGAQANAAVYQALVKPGDTVLGLALDHGGHLTHG-----MKINFSGRFYHAEAYGVNPETFRID 165
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_THEYD (Serine hydroxymethyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glyA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.785e-33 Identity = 75/160 (46.88%), Postives = 101/160 (63.12%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L VD EI +I EK R+ + +I SEN+ S +VM+A GS+ TNKY+EGYPG RYYGG EY D E L Q+RA + F ++ VNVQ SG+ +N VY A+L+P D IM + L HGGHLSHG ++ ++T+ Y +N+ TGYID D+ Sbjct: 6 LREVDAEIYSLILQEKKRETNKILMIASENYASRAVMEAQGSLFTNKYAEGYPGRRYYGGCEYADEVERLAQERAKQLFNVE----HVNVQPHSGTQANMAVYFAMLQPGDTIMGMSLTHGGHLSHG-----SPVNFTGKLYKTVFYGVNKETGYIDMDE 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PARD8 (Serine hydroxymethyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=glyA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.785e-33 Identity = 74/156 (47.44%), Postives = 98/156 (62.82%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D I DIIE E RQ KG+ELI SENF S VMQA+GS +TNKY+EGYPG RYYGG E +D +E++ +R + F + W NVQ SG+ +N V+ A+L P D + L+L HGGHLSHG +++ + + Y + E TG +DYDQ Sbjct: 4 DNIIFDIIEKEHQRQLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGCEVVDQSETIAIERLKKLFNAE---W-ANVQPHSGAQANAAVFFAVLNPGDTFLGLNLSHGGHLSHG-----SPVNSSGVLYHATEYNVKEDTGRVDYDQ 150
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_BIFLI (Serine hydroxymethyltransferase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=glyA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.785e-33 Identity = 76/160 (47.50%), Postives = 101/160 (63.12%), Query Frame = 1 Query: 208 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 687 NAP+ DPEIA++++ E RQ GLE+I SENF +V+Q GSV+TNKY+EGYPG RYYGG EY+D E++ ++RA F + VNVQ SG+ +N VY AL+KP D ++ L L HGGHL+HG KI+ F+ Y +N T ID Sbjct: 15 NAPICETDPEIAELLDSELGRQRNGLEMIASENFVPRAVLQCQGSVLTNKYAEGYPGHRYYGGCEYVDQIETIARERAKALFGAE----YVNVQPHSGAQANAAVYQALVKPGDTVLGLALDHGGHLTHG-----MKINFSGRFYHAEAYGVNPVTFRID 165
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_ACIC5 (Serine hydroxymethyltransferase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=glyA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.785e-33 Identity = 72/165 (43.64%), Postives = 104/165 (63.03%), Query Frame = 1 Query: 202 QLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 +++ L DP++A I+HE RQ +GLE+I SENF S +V++A GSV TNKY+EGYPG RYYGG E+ D+ E+L + RA + F + NVQ SGS +N Y ++++P D I+ LDL HGGHL+HG+ K++ + Y + + T IDYD+ Sbjct: 4 RMSLSLAQSDPDVAAAIDHEVLRQHEGLEMIASENFVSRAVLEAAGSVFTNKYAEGYPGRRYYGGCEFADVVENLARDRAKQLFGAE----HANVQPHSGSQANAAAYMSIIQPGDTILGLDLAHGGHLTHGH-----KLNFSGKLYRVASYGVRKDTETIDYDE 159
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA1_HAHCH (Serine hydroxymethyltransferase 1 OS=Hahella chejuensis (strain KCTC 2396) GN=glyA1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.785e-33 Identity = 78/156 (50.00%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE++ I EK RQ + +ELI SEN+ S VM+A G V+TNKY+EGYPG RYYGG E++D+AE L RA + F D NVQ SGS +N VY AL KP D I+ + L HGGHL+HG K + F + Y LN TG IDYDQ Sbjct: 12 DPELSAAINAEKRRQEEHIELIASENYVSPRVMEAQGGVLTNKYAEGYPGKRYYGGCEHVDVAEQLAIDRAKQLFGAD----YANVQPHSGSQANAGVYLALAKPGDTILGMSLDHGGHLTHG-----AKPNFSGKIFNAVQYGLNPETGEIDYDQ 158
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_KLEP7 (Serine hydroxymethyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=glyA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.017e-32 Identity = 77/155 (49.68%), Postives = 99/155 (63.87%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 D E+ +E EK RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS +NF VYTALL+P D ++ ++L GGHL+HG ++ + +PY ++ES G IDYD Sbjct: 12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHG-----SPVNFSGKLYNIIPYGIDES-GKIDYD 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_KLEP3 (Serine hydroxymethyltransferase OS=Klebsiella pneumoniae (strain 342) GN=glyA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.017e-32 Identity = 77/155 (49.68%), Postives = 99/155 (63.87%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 D E+ +E EK RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS +NF VYTALL+P D ++ ++L GGHL+HG ++ + +PY ++ES G IDYD Sbjct: 12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHG-----SPVNFSGKLYNIIPYGIDES-GKIDYD 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_HELMI (Serine hydroxymethyltransferase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=glyA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.017e-32 Identity = 73/160 (45.62%), Postives = 100/160 (62.50%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L VDPE+A ++ EK RQ +ELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG E++D E L +RA F + NVQ SG+ +N VY A L+P D ++ ++L HGGHL+HG ++ +F + Y ++ TG IDYD+ Sbjct: 7 LHQVDPEVAAAMDREKKRQKNNIELIASENFVSEAVMEAAGSVLTNKYAEGYPGKRYYGGCEFVDQVERLAIERAKRLFGAE----HANVQPHSGANANMGVYFACLEPGDTVLGMNLAHGGHLTHG-----SPVNISGKYFRFVAYGVDAHTGRIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_ECOLU (Serine hydroxymethyltransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=glyA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.017e-32 Identity = 75/154 (48.70%), Postives = 100/154 (64.94%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 690 D E+ +E EK RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS +NF VYTALL+P D ++ ++L HGGHL+HG ++ + +PY + +++G+IDY Sbjct: 12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DASGHIDY 155 The following BLAST results are available for this feature:
BLAST of FC868797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868797 ID=FC868797; Name=FC868797; organism=Citrus clementina; type=EST; length=697bpback to top |