FC868797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PROVI (Serine hydroxymethyltransferase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=glyA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.734e-32 Identity = 78/160 (48.75%), Postives = 103/160 (64.38%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L++ D E+ + I E RQ + LELI SENFTS +VMQA GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA + F + VNVQ SGS +N V ++LKP D IM LDL HGGHL+HG ++ ++ Y ++ TG ID +Q Sbjct: 6 LKMQDREVFEAIALETGRQMETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCE----YVNVQPHSGSSANMAVLFSVLKPGDCIMGLDLSHGGHLTHG-----SSVNFSGQMYKAHAYGVDGETGIIDMNQ 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_MYCA5 (Serine hydroxymethyltransferase OS=Mycoplasma arthritidis (strain 158L3-1) GN=glyA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.734e-32 Identity = 74/164 (45.12%), Postives = 102/164 (62.20%), Query Frame = 1 Query: 205 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 +N + + D +IAD+I E RQ + +ELI SEN+ S VM+A GS +TNKY EGYPG RYYGG E++D E + Q+RA + F NVQ SGS +N +Y ALL P D ++ L L GGHL+HGY +IS IF+++ Y +N+ G +DYD+ Sbjct: 1 MNKKVTLHDQDIADLINKESHRQEEHIELIASENYVSEDVMKAAGSSLTNKYGEGYPGKRYYGGCEFVDEIEKIAQERACKLFNAK----YANVQPYSGSVANAAIYMALLNPGDSVLGLSLDSGGHLTHGY-----RISFSGIFYKSYTYTVNQD-GVLDYDE 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_METHJ (Serine hydroxymethyltransferase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=glyA PE=3 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.734e-32 Identity = 76/158 (48.10%), Postives = 100/158 (63.29%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 690 LE DPEIA II+ E RQ GLELI SEN S +V++A GS+MTNKY+EGYPG RYYGG E+ DMAE+L + R F + NVQ SGS +N VY +LKP D+I++++L GGHLSHG ++ I +E+ Y ++ T +DY Sbjct: 4 LETTDPEIAAIIDKETNRQINGLELIASENVVSRAVLEASGSIMTNKYAEGYPGKRYYGGCEFHDMAENLARDRVCSLFGAE----HANVQPHSGSQANMAVYFTVLKPSDKILSMNLSQGGHLSHG-----SPVNFSGIIYESHQYGVDLKTERMDY 152
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_METCA (Serine hydroxymethyltransferase OS=Methylococcus capsulatus GN=glyA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.734e-32 Identity = 75/156 (48.08%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D E+ I+ E+ RQ +ELI SEN+ S V+QA G+V+TNKY+EGYPG RYYGG EY+D+ E+L +RA F D NVQ SGS +N VY ALLKP D ++ + L HGGHL+HG K++ + + Y LN TG IDYDQ Sbjct: 12 DDELWAAIQEEERRQEDHIELIASENYASPRVLQAQGTVLTNKYAEGYPGKRYYGGCEYVDIVETLAIERAKRLFGAD----YANVQPHSGSQANAAVYMALLKPGDTVLGMSLAHGGHLTHG-----AKVNFSGKIYNAVQYGLNPETGEIDYDQ 158
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_HALHL (Serine hydroxymethyltransferase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=glyA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.734e-32 Identity = 77/156 (49.36%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+A IE E+ RQ +ELI SEN+ S VM+A GSV+TNKY+EGYPG RYYGG E++D+AE L RA + F D NVQ SGS +N V+ ALLKP D I+ + L HGGHL+HG K++ F + Y +N+ G IDYD+ Sbjct: 12 DPELAAAIEDERQRQEDHIELIASENYASPRVMEAQGSVLTNKYAEGYPGKRYYGGCEHVDVAEQLAIDRAKQLFGAD----YANVQPHSGSQANAAVFHALLKPGDTILGMSLDHGGHLTHG-----AKVNFSGKLFNAVQYGINDD-GQIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_CITK8 (Serine hydroxymethyltransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=glyA PE=3 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.734e-32 Identity = 76/156 (48.72%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D E+ +E EK RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS +NF VYTALL+P D ++ ++L GGHL+HG ++ + +PY ++ES G IDY++ Sbjct: 12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHG-----SPVNFSGKLYNIVPYGIDES-GKIDYEE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA1_ERWCT (Serine hydroxymethyltransferase 1 OS=Erwinia carotovora subsp. atroseptica GN=glyA1 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.734e-32 Identity = 76/156 (48.72%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D ++ +E E RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA F D NVQ SGS +NF VYTALL+P D I+ ++L HGGHL+HG ++ ++ +PY ++ES G IDYD+ Sbjct: 12 DADLWQAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKALFGAD----YANVQPHSGSQANFAVYTALLQPGDTILGMNLAHGGHLTHG-----SPVNLSGKLYKVIPYGIDES-GKIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SYNS9 (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain CC9902) GN=glyA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32 Identity = 77/165 (46.67%), Postives = 104/165 (63.03%), Query Frame = 1 Query: 199 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 + +NA L DPEI+ +I+ E+ RQ LELI SENF S +VMQA GSV+TNKY+EG P RYYGG E++D E+L +RA + F W NVQ SG+ +NF V+ ALLKP D IM LDL HGGHL+HG ++ +F + Y ++ +T +D + Sbjct: 7 RAINAGLASADPEISRLIDQERHRQETHLELIASENFASQAVMQAQGSVLTNKYAEGLPAKRYYGGCEHVDAIETLAIERAKQLF---DAAW-ANVQPHSGAQANFAVFLALLKPGDTIMGLDLSHGGHLTHG-----SPVNVSGKWFNVVQYGVDPTTQRLDME 162
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_STRMK (Serine hydroxymethyltransferase OS=Stenotrophomonas maltophilia (strain K279a) GN=glyA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32 Identity = 78/160 (48.75%), Postives = 100/160 (62.50%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 +E DPE+A I E RQ +ELI SEN+TS +VM+A GS +TNKY+EGYPG RYYGG EY+D+AE L R + F D NVQ SGS +N VY ALL+P D I+ + L HGGHL+HG K++A F + Y +N+ G IDYD+ Sbjct: 8 IESYDPELAKAIAAETQRQEDHVELIASENYTSPAVMEAQGSQLTNKYAEGYPGKRYYGGCEYVDIAEQLAIDRLKQLFGAD----YANVQPHSGSQANQAVYFALLQPGDTILGMSLAHGGHLTHG-----AKVNASGKLFNAVQYGVNDQ-GLIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_STRM5 (Serine hydroxymethyltransferase OS=Stenotrophomonas maltophilia (strain R551-3) GN=glyA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32 Identity = 78/160 (48.75%), Postives = 100/160 (62.50%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 +E DPE+A I E RQ +ELI SEN+TS +VM+A GS +TNKY+EGYPG RYYGG EY+D+AE L R + F D NVQ SGS +N VY ALL+P D I+ + L HGGHL+HG K++A F + Y +N+ G IDYD+ Sbjct: 8 IESYDPELAKAIAAETQRQEDHVELIASENYTSPAVMEAQGSQLTNKYAEGYPGKRYYGGCEYVDIAEQLAIDRLKQLFGAD----YANVQPHSGSQANQAVYFALLQPGDTILGMSLAHGGHLTHG-----AKVNASGKLFNAVQYGVNDQ-GLIDYDE 157 The following BLAST results are available for this feature:
BLAST of FC868797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868797 ID=FC868797; Name=FC868797; organism=Citrus clementina; type=EST; length=697bpback to top |