FC868797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SHESR (Serine hydroxymethyltransferase OS=Shewanella sp. (strain MR-7) GN=glyA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32 Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+ + I++E RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E+L +RA + F NVQ SGS +N VY ALLKP D ++ ++L HGGHL+HG ++ + +PY ++ES G IDYD+ Sbjct: 12 DPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVETLAIERAKQLFGAT----YANVQPHSGSQANSAVYMALLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGRLYNIIPYGIDES-GKIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SHESM (Serine hydroxymethyltransferase OS=Shewanella sp. (strain MR-4) GN=glyA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32 Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+ + I++E RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E+L +RA + F NVQ SGS +N VY ALLKP D ++ ++L HGGHL+HG ++ + +PY ++ES G IDYD+ Sbjct: 12 DPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVETLAIERAKQLFGAT----YANVQPHSGSQANSAVYMALLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGRLYNIIPYGIDES-GKIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SHESA (Serine hydroxymethyltransferase OS=Shewanella sp. (strain ANA-3) GN=glyA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32 Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+ + I++E RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E+L +RA + F NVQ SGS +N VY ALLKP D ++ ++L HGGHL+HG ++ + +PY ++ES G IDYD+ Sbjct: 12 DPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVETLAIERAKQLFGAT----YANVQPHSGSQANSAVYMALLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGRLYNIIPYGIDES-GKIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SHEON (Serine hydroxymethyltransferase OS=Shewanella oneidensis GN=glyA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32 Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+ + I++E RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E+L +RA + F NVQ SGS +N VY ALLKP D ++ ++L HGGHL+HG ++ + +PY ++ES G IDYD+ Sbjct: 12 DPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVETLAIERAKQLFGAT----YANVQPHSGSQANSAVYMALLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGRLYNIIPYGIDES-GKIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SHEB2 (Serine hydroxymethyltransferase OS=Shewanella baltica (strain OS223) GN=glyA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32 Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+ + I++E RQ + +ELI SEN+TS VM+A GS +TNKY+EGYPG RYYGG EY+D+ E+L +RA E F NVQ SGS +N VY ALLKP D ++ ++L HGGHL+HG ++ + +PY ++ES G IDYD+ Sbjct: 12 DPELFNAIQNETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYPGKRYYGGCEYVDVVETLAIERAKELFGAT----YANVQPHSGSQANSAVYMALLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIIPYGIDES-GKIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_HALMA (Serine hydroxymethyltransferase OS=Haloarcula marismortui GN=glyA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32 Identity = 74/155 (47.74%), Postives = 97/155 (62.58%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 DP +AD +E E+ RQ L +I SEN S +VM+A S +TNKY+EGYPG RYYGG EY D E L RA E + D VNVQ SGS +N VY +L+P D+I++LDL HGGHLSHG+ + +E Y+++E TGY+DY+ Sbjct: 10 DPAVADALEGERGRQNDTLAMIASENHVSEAVMEAQSSELTNKYAEGYPGERYYGGCEYADDVEELAIDRAKELWGAD----HVNVQPHSGSQANMGVYLGVLEPGDKILSLDLTHGGHLSHGHPA-----NFAGQVYEVEQYKVDEETGYVDYE 155
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_GEOLS (Serine hydroxymethyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=glyA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32 Identity = 72/160 (45.00%), Postives = 101/160 (63.12%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L DP +A+ I+HE RQ LELI SENF S +V++A GSVMTNKY+EGYPG RYYGG ++D+ E+L +RA E F + NVQ +GS +N VY A+ +P D I+ ++L HGGHL+HG ++ F+ +PY ++ T IDY++ Sbjct: 4 LSQFDPAVAEAIQHETERQEYNLELIASENFVSEAVLEAQGSVMTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGAE----HANVQPHAGSQANMAVYNAVCQPGDTILGMNLSHGGHLTHG-----SPVNFSGRFYNVVPYGVSPDTETIDYNE 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_CLOPH (Serine hydroxymethyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=glyA PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.265e-32 Identity = 74/160 (46.25%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 ++V DPE+AD I E ARQ +ELI SENF S +VM A+GS +TNKY+EGYPG RYYGG E++D+AE+L +RA + F NVQ SG+ +N V+ ALL+P D +M ++L HGGHL+HG ++ +F +PY ++++ G+IDY++ Sbjct: 7 IKVFDPELADSITMEIARQNDHIELIASENFVSKAVMAAMGSPLTNKYAEGYPGKRYYGGCEFVDIAENLAIERAKKLFGCT----YANVQPHSGAQANMAVFFALLQPGDTVMGMNLAHGGHLTHG-----SPVNFSGSYFNIVPYGVDDN-GFIDYEE 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_WOLSU (Serine hydroxymethyltransferase OS=Wolinella succinogenes GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.958e-32 Identity = 77/164 (46.95%), Postives = 104/164 (63.41%), Query Frame = 1 Query: 205 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 +N LE D EI D+I E RQ LE+I SENFT +VM+A+GSV+TNKY+EGYP RYYGG E++D E + +RA + F NVQ +GS +N VY ALLKP+D+I+ +DL HGGHL+HG K+S +++ Y + E GYI+YD+ Sbjct: 1 MNYALETNDKEIFDLIHEELDRQNTHLEMIASENFTFPAVMEAMGSVLTNKYAEGYPYKRYYGGCEFVDRVEEIAIERAKKLFGCG----FANVQPHAGSQANVAVYNALLKPYDKILGMDLSHGGHLTHG-----AKVSVTGQTYQSFFYGV-ELDGYINYDK 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SHEB8 (Serine hydroxymethyltransferase OS=Shewanella baltica (strain OS185) GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.958e-32 Identity = 75/156 (48.08%), Postives = 101/156 (64.74%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+ I++E RQ + +ELI SEN+TS VM+A GS +TNKY+EGYPG RYYGG EY+D+ E+L +RA E F NVQ SGS +N VY ALLKP D ++ ++L HGGHL+HG ++ + +PY ++ES G IDYD+ Sbjct: 12 DPELFKAIQNETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYPGKRYYGGCEYVDVVETLAIERAKELF----SATYANVQPHSGSQANSAVYMALLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIIPYGIDES-GKIDYDE 157 The following BLAST results are available for this feature:
BLAST of FC868797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868797 ID=FC868797; Name=FC868797; organism=Citrus clementina; type=EST; length=697bpback to top |