FC868797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PELCD (Serine hydroxymethyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.958e-32 Identity = 74/156 (47.44%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPEIA+ I E RQ LE I SENF S VM+A GS+MTNKY+EGYP RYYGG E +D+AE L +RA E F + NVQ+ SGS +N VY A KP D ++ ++L HGGHL+HG ++ F + Y + + TGYIDY++ Sbjct: 9 DPEIAEAIRLETERQEYNLEFIASENFVSEQVMEAQGSIMTNKYAEGYPAKRYYGGCEMVDIAERLAIERAKELFGAE----HANVQAHSGSQANMAVYFAACKPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLFNIVSYGVQKETGYIDYEE 155
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_KOCRD (Serine hydroxymethyltransferase OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.958e-32 Identity = 75/163 (46.01%), Postives = 98/163 (60.12%), Query Frame = 1 Query: 208 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 N PL VDP++A I+ E RQ LE+I SENF +V++A GSV+TNKY+EGYPG RYYGG EY+D+ E+L + RA E F D NVQ SG+ +N V AL++P D +M L L HGGHL+HG KI+ + Y + T ID D+ Sbjct: 7 NQPLSDVDPDVAQAIQDELGRQRSTLEMIASENFAPRAVLEAQGSVLTNKYAEGYPGRRYYGGCEYVDVVENLARDRACELFGAD----HANVQPHSGAQANTAVMAALMQPGDTLMGLSLAHGGHLTHG-----MKINVSGKLYNIAAYEVEPETYRIDMDR 160
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_HALLT (Serine hydroxymethyltransferase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.958e-32 Identity = 75/156 (48.08%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 226 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 VDPE+AD + E+ RQ + L +I SEN S +V++A GSV+TNKY+EGYPG RYY G EY D E+L RA E + D VNVQ SG+ +N VY A+L P D+I++LDL HGGHLSHG+ + +E Y ++ TGYIDY+ Sbjct: 9 VDPEVADALAGERDRQEQTLAMIASENHVSEAVLEAQGSVLTNKYAEGYPGERYYAGCEYADEVETLAIDRAKELWGAD----HVNVQPHSGTQANQAVYYAVLDPGDKILSLDLNHGGHLSHGHPA-----NFTGQIYEVEQYEVDADTGYIDYE 155
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_ENTS8 (Serine hydroxymethyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=glyA PE=3 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 2.958e-32 Identity = 76/155 (49.03%), Postives = 99/155 (63.87%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 D E+ +E EK RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS +NF VYTALL+P D ++ ++L GGHL+HG ++ + +PY ++ES G IDY+ Sbjct: 12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHG-----SPVNFSGKLYNIIPYGIDES-GKIDYE 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_ENT38 (Serine hydroxymethyltransferase OS=Enterobacter sp. (strain 638) GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.958e-32 Identity = 76/155 (49.03%), Postives = 99/155 (63.87%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 D E+ +E EK RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS +NF VYTALL+P D ++ ++L GGHL+HG ++ + +PY ++ES G IDY+ Sbjct: 12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHG-----SPVNFSGKLYNIIPYGIDES-GKIDYE 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SHEB9 (Serine hydroxymethyltransferase OS=Shewanella baltica (strain OS195) GN=glyA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32 Identity = 75/156 (48.08%), Postives = 101/156 (64.74%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+ I++E RQ + +ELI SEN+TS VM+A GS +TNKY+EGYPG RYYGG EY+D+ E+L +RA E F NVQ SGS +N VY ALLKP D ++ ++L HGGHL+HG ++ + +PY ++ES G IDYD+ Sbjct: 12 DPELFKAIQNETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYPGKRYYGGCEYVDVVETLAIERAKELFGAT----YANVQPHSGSQANSAVYMALLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIIPYGIDES-GKIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SHEB5 (Serine hydroxymethyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=glyA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32 Identity = 75/156 (48.08%), Postives = 101/156 (64.74%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+ I++E RQ + +ELI SEN+TS VM+A GS +TNKY+EGYPG RYYGG EY+D+ E+L +RA E F NVQ SGS +N VY ALLKP D ++ ++L HGGHL+HG ++ + +PY ++ES G IDYD+ Sbjct: 12 DPELFKAIQNETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYPGKRYYGGCEYVDVVETLAIERAKELFGAT----YANVQPHSGSQANSAVYMALLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIIPYGIDES-GKIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SERP5 (Serine hydroxymethyltransferase OS=Serratia proteamaculans (strain 568) GN=glyA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32 Identity = 76/155 (49.03%), Postives = 98/155 (63.23%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 D E+ +E E RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS +NF VYTALL+P D I+ ++L HGGHL+HG ++ + +PY ++E G IDY+ Sbjct: 12 DAELWRAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLQPGDTILGMNLAHGGHLTHG-----SPVNLSGKLYNVVPYGIDEK-GQIDYE 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PROM4 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9211) GN=glyA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32 Identity = 73/163 (44.79%), Postives = 106/163 (65.03%), Query Frame = 1 Query: 205 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 +N+ LE DP IA +I+ E RQ LELI SENFTS +VM+A GSV+TNKY+EG P RYYGG E+ID E L +RA + F+ + W NVQ SG+ +NF V+ +LL+P ++IM +DL HGGHL+HG ++ +F+ + Y +++ T ++ + Sbjct: 4 INSALEDADPNIASLIQEESKRQENHLELIASENFTSKAVMEAQGSVLTNKYAEGLPNKRYYGGCEHIDKIEGLAIERAKQLFKAE---W-ANVQPHSGAQANFSVFLSLLEPGEKIMGMDLSHGGHLTHG-----SPVNVSGKWFKAIHYGVDKETQRLEME 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_PELPD (Serine hydroxymethyltransferase OS=Pelobacter propionicus (strain DSM 2379) GN=glyA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32 Identity = 76/158 (48.10%), Postives = 99/158 (62.66%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDY 690 L +DPE+AD I E RQ LELI SENF S +V++A GSV+TNKY+EGYPG RYYGG +D+ E+L +RA + F D E NVQ SGS +N VY + LKP D I+ ++L HGGHL+HG ++ FF +PY ++ T IDY Sbjct: 4 LSTLDPEVADAIRLEADRQEYNLELIASENFVSTAVLEAQGSVLTNKYAEGYPGKRYYGGCHNVDIVEALAIERAKQLF--DAEH--ANVQPHSGSQANMAVYFSALKPGDTILGMNLSHGGHLTHG-----SPVNFSGRFFNVVPYGVSPETQTIDY 152 The following BLAST results are available for this feature:
BLAST of FC868797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868797 ID=FC868797; Name=FC868797; organism=Citrus clementina; type=EST; length=697bpback to top |