FC868797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_METMA (Serine hydroxymethyltransferase OS=Methanosarcina mazei GN=glyA PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32 Identity = 73/160 (45.62%), Postives = 104/160 (65.00%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 +E +DPE+ + I++E RQ L LI SEN+ S +VM+A GS+MTNKY+EGY G RYYGG +++D+AE+L RA E F VNVQ SGS +N VY ++L+P D I+++DL HGGHLSHG +S + +PY +++ T +DYD+ Sbjct: 4 IEKIDPELFEAIKNEADRQEHKLNLIASENYASRAVMEAQGSIMTNKYAEGYSGKRYYGGCDFVDVAENLAIARAKELFGAK----YVNVQPHSGSGANMAVYFSVLQPGDTILSMDLSHGGHLSHG-----SPVSFSGKLYNIVPYGVSKETEALDYDE 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_EUBR3 (Serine hydroxymethyltransferase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=glyA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32 Identity = 75/156 (48.08%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPEIA I E RQ +ELI SEN+ S +VM A+GS++TNKY+EGYPG RYYGG E +D E L ++RA E F + VNVQ SG+ +N V A+LKP D IM ++L HGGHL+HG ++ +F +PY +N+ G+IDYD+ Sbjct: 11 DPEIASAITDEFERQNSHIELIASENWVSPAVMSAMGSILTNKYAEGYPGRRYYGGCECVDEVEELARERAKELFGAE----YVNVQPHSGAQANMAVQFAILKPGDTIMGMNLDHGGHLTHG-----SPVNFSGSYFHVVPYGVNDE-GFIDYDK 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA4_COLP3 (Serine hydroxymethyltransferase 4 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=glyA4 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32 Identity = 76/156 (48.72%), Postives = 95/156 (60.90%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D I +E E RQ +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG E++D+ E L RA E F D NVQ SGS +N V+ ALLKP + ++ + L HGGHL+HG K+S + + Y LNE TG IDYD+ Sbjct: 12 DDSIWQAMEQEDKRQQDHVELIASENYTSARVMQAQGSQLTNKYAEGYPGKRYYGGCEHVDVIEQLAIDRAKELFGAD----YANVQPHSGSQANAAVFMALLKPGETVLGMSLAHGGHLTHG-----SKVSFSGKIYNAVQYGLNEVTGEIDYDE 158
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_XANCP (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. campestris GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.046e-32 Identity = 78/160 (48.75%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 LE DPE+A I E RQ +ELI SEN+ S VM+A GS +TNKY+EGYPG RYYGG E++D+AE L R + F D NVQ SGS +N VY ALL+P D I+ + L HGGHL+HG K++A F + Y +NE G IDYD+ Sbjct: 8 LETYDPELAKAIAAEAGRQEDHVELIASENYCSPLVMEAQGSQLTNKYAEGYPGKRYYGGCEFVDIAEQLAIDRIKQVFGAD----YANVQPHSGSQANQAVYLALLQPGDTILGMSLAHGGHLTHG-----AKVNASGKLFNAVQYGVNEQ-GLIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_XANCB (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.046e-32 Identity = 78/160 (48.75%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 LE DPE+A I E RQ +ELI SEN+ S VM+A GS +TNKY+EGYPG RYYGG E++D+AE L R + F D NVQ SGS +N VY ALL+P D I+ + L HGGHL+HG K++A F + Y +NE G IDYD+ Sbjct: 8 LETYDPELAKAIAAEAGRQEDHVELIASENYCSPLVMEAQGSQLTNKYAEGYPGKRYYGGCEFVDIAEQLAIDRIKQVFGAD----YANVQPHSGSQANQAVYLALLQPGDTILGMSLAHGGHLTHG-----AKVNASGKLFNAVQYGVNEQ-GLIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_XANC8 (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.046e-32 Identity = 78/160 (48.75%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 LE DPE+A I E RQ +ELI SEN+ S VM+A GS +TNKY+EGYPG RYYGG E++D+AE L R + F D NVQ SGS +N VY ALL+P D I+ + L HGGHL+HG K++A F + Y +NE G IDYD+ Sbjct: 8 LETYDPELAKAIAAEAGRQEDHVELIASENYCSPLVMEAQGSQLTNKYAEGYPGKRYYGGCEFVDIAEQLAIDRIKQVFGAD----YANVQPHSGSQANQAVYLALLQPGDTILGMSLAHGGHLTHG-----AKVNASGKLFNAVQYGVNEQ-GLIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SHEPC (Serine hydroxymethyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.046e-32 Identity = 74/156 (47.44%), Postives = 102/156 (65.38%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DPE+ + I++E RQ + +ELI SEN+TS VM+A GS +TNKY+EGYPG RYYGG EY+D+ E+L +RA + F NVQ SGS +N VY ALLKP D ++ ++L HGGHL+HG ++ + +PY ++ES G IDYD+ Sbjct: 12 DPELFNAIQNETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYPGKRYYGGCEYVDVVETLAIERAKQLFGAT----YANVQPHSGSQANSAVYMALLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIIPYGIDES-GKIDYDE 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SALAR (Serine hydroxymethyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=glyA PE=3 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 5.046e-32 Identity = 75/155 (48.39%), Postives = 99/155 (63.87%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 D E+ +E EK RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS +NF VYTALL+P D ++ ++L GGHL+HG ++ + +PY + +++G IDYD Sbjct: 12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHG-----SPVNFSGKLYNIIPYGI-DASGKIDYD 156
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_DESHY (Serine hydroxymethyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=glyA PE=3 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 5.046e-32 Identity = 70/155 (45.16%), Postives = 101/155 (65.16%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 DPE+A+ I E+ RQ +ELI SENF S +VM A GSV+TNKY+EGYPG RYYGG EY+D+ E L ++R + F + NVQ SG+ +N VY A+LKP D ++ ++L HGGHL+HG ++ +++ + Y ++++T IDYD Sbjct: 12 DPEVAEAIAQEEQRQRYKIELIASENFVSRAVMAAQGSVLTNKYAEGYPGKRYYGGCEYVDIVEDLARERVKKLFGAE----HANVQPHSGAQANTAVYFAMLKPGDTVLGMNLSHGGHLTHG-----SPVNISGMYYNFVAYGVDQATERIDYD 157
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_ACIAD (Serine hydroxymethyltransferase OS=Acinetobacter sp. (strain ADP1) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.046e-32 Identity = 77/163 (47.24%), Postives = 97/163 (59.51%), Query Frame = 1 Query: 208 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 N L DPE+A IE E ARQ +ELI SEN+ S +VM+A GS +TNKY+EGYPG RYYGG EY+D+ E L RA F D NVQ +GS +N VY ALL D ++ + L HGGHL+HG K++ + + Y LN TG IDYD+ Sbjct: 4 NISLSEFDPELAKSIEAEDARQEAHIELIASENYCSPAVMEAQGSKLTNKYAEGYPGKRYYGGCEYVDVIEQLAIDRAKALFGAD----YANVQPHAGSQANSAVYLALLNAGDTVLGMSLAHGGHLTHG-----AKVNFSGKTYNAVQYGLNPETGEIDYDE 157 The following BLAST results are available for this feature:
BLAST of FC868797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868797 ID=FC868797; Name=FC868797; organism=Citrus clementina; type=EST; length=697bpback to top |