FC868797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA2_COLP3 (Serine hydroxymethyltransferase 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=glyA2 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.046e-32 Identity = 75/156 (48.08%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 D I +E E RQ +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG E++D+ E L RA E F D NVQ SGS +N V+ ALLKP + ++ + L HGGHL+HG K+S + + Y LNE+TG IDY++ Sbjct: 12 DDSIWQAMEQEDKRQQDHVELIASENYTSARVMQAQGSQLTNKYAEGYPGKRYYGGCEHVDVIEQLAIDRAKELFGAD----YANVQPHSGSQANAAVFMALLKPGETVLGMSLAHGGHLTHG-----SKVSFSGKIYNAVQYGLNEATGEIDYEE 158
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_THESQ (Serine hydroxymethyltransferase OS=Thermotoga sp. (strain RQ2) GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32 Identity = 74/157 (47.13%), Postives = 99/157 (63.06%), Query Frame = 1 Query: 226 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 VDPEI +++ +E RQ GLELI SENF S++V++ +GS++TNKY+EGYP RYYGG E++D AE L +RA F NVQ SGS +N VY AL +P D IM + L HGGHL+HG ++ F+ +PY +N T IDYD+ Sbjct: 8 VDPEIYEVLVNELKRQEYGLELIASENFASLAVIETMGSMLTNKYAEGYPQKRYYGGCEWVDRAEELAIERAKRLFGAK----FANVQPHSGSQANMAVYLALAQPGDTIMGMSLSHGGHLTHG-----APVNFSGKIFKVVPYGVNLETETIDYDE 155
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_THEP1 (Serine hydroxymethyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32 Identity = 74/157 (47.13%), Postives = 99/157 (63.06%), Query Frame = 1 Query: 226 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 VDPEI +++ +E RQ GLELI SENF S++V++ +GS++TNKY+EGYP RYYGG E++D AE L +RA F NVQ SGS +N VY AL +P D IM + L HGGHL+HG ++ F+ +PY +N T IDYD+ Sbjct: 8 VDPEIYEVLVNELKRQEYGLELIASENFASLAVIETMGSMLTNKYAEGYPQKRYYGGCEWVDRAEELAIERAKRLFGAK----FANVQPHSGSQANMAVYLALAQPGDTIMGMSLSHGGHLTHG-----APVNFSGKIFKVVPYGVNLETETIDYDE 155
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_SACD2 (Serine hydroxymethyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32 Identity = 73/160 (45.62%), Postives = 97/160 (60.62%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 L+ DPEI I+ E RQ + +ELI SEN+TS VM+A G+ +TNKY+EGYPG RYYGG EY+D AE+L +RA F D NVQ SGS +N VY AL P D ++ + L HGGHL+HG +S + + Y +N TG +DY++ Sbjct: 8 LDAFDPEIWQSIQDEAQRQEEHIELIASENYTSPMVMEAQGTKLTNKYAEGYPGKRYYGGCEYVDKAEALAIERAKTLFGAD----YANVQPHSGSQANSAVYAALCSPGDTVLGMSLAHGGHLTHG-----ASVSFSGKMYNAVQYGINPDTGLVDYEE 158
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_METAC (Serine hydroxymethyltransferase OS=Methanosarcina acetivorans GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32 Identity = 73/160 (45.62%), Postives = 103/160 (64.38%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 +E +DP++ + I+ E RQ L LI SEN+ S +VM+A GS+MTNKY+EGY G RYYGG +++D+AE+L RA E F VNVQ SGS +N VY ++L+P D IM++DL HGGHLSHG +S + +PY +++ T +DYD+ Sbjct: 4 IEKIDPDMFEAIQKEADRQEHKLNLIASENYASRAVMEAQGSIMTNKYAEGYSGKRYYGGCDFVDIAENLAIARAKEIFGAK----YVNVQPHSGSGANMAVYFSVLQPGDTIMSMDLSHGGHLSHG-----SPVSFSGKLYNIVPYGVSKETEALDYDE 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_HELPY (Serine hydroxymethyltransferase OS=Helicobacter pylori GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32 Identity = 77/160 (48.12%), Postives = 103/160 (64.38%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 LE D EI ++I E RQ + LE+I SEN+T SVM+A+GSV+TNKY+EGYP RYYGG E +D ESL +RA + F NVQ+ SGS +N VY ALLKP+D+I+ +DL GGHL+HG K+S +++ Y +N GYIDY++ Sbjct: 5 LEQTDSEIFELIFEEYKRQNEHLEMIASENYTFASVMEAMGSVLTNKYAEGYPNKRYYGGCEVVDKIESLAIERAKKLFNCQ----FANVQAHSGSQANNAVYHALLKPYDKILGMDLSCGGHLTHG-----AKVSLTGKHYQSFSYGVN-LDGYIDYEE 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_HELPS (Serine hydroxymethyltransferase OS=Helicobacter pylori (strain Shi470) GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32 Identity = 77/160 (48.12%), Postives = 103/160 (64.38%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 LE D EI ++I E RQ + LE+I SEN+T SVM+A+GSV+TNKY+EGYP RYYGG E +D ESL +RA + F NVQ+ SGS +N VY ALLKP+D+I+ +DL GGHL+HG K+S +++ Y +N GYIDY++ Sbjct: 5 LEQTDSEIFELIFEEYKRQNEHLEMIASENYTFASVMEAMGSVLTNKYAEGYPNKRYYGGCEVVDKIESLAIERAKKLFNCQ----FANVQAHSGSQANNAVYHALLKPYDKILGMDLSCGGHLTHG-----AKVSLTGKHYQSFSYGVN-LDGYIDYEE 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_GEOUR (Serine hydroxymethyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32 Identity = 74/160 (46.25%), Postives = 97/160 (60.62%), Query Frame = 1 Query: 217 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 LE DP +A+ I E RQ LELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG +D+ E+L +RA E F + NVQ SGS +N VY +LKP D ++ ++L HGGHL+HG ++ FF +PY + IDYD+ Sbjct: 4 LETFDPAVANAIRLETERQEYNLELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGGCHNVDIVENLAIERAKELFGAE----HANVQPHSGSQANMAVYFTVLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGKFFNIVPYGVTRENQTIDYDE 154
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_CYAP8 (Serine hydroxymethyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32 Identity = 78/156 (50.00%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ 696 DP +A+II+ E RQ LELI SENFTS +V+ A GSV+TNKY+EG P RYYGG EYID AE L RA E F NVQ SG+ +NF V+ ALL P D IM +DL HGGHL+HG ++ +F+ Y +N T +DYDQ Sbjct: 13 DPAMAEIIQGELQRQRDHLELIASENFTSEAVLAAQGSVLTNKYAEGLPKKRYYGGCEYIDRAEQLAIDRAKELFGAA----HANVQPHSGAQANFAVFLALLSPGDTIMGMDLSHGGHLTHG-----SPVNVSGKWFKVCHYGVNPDTERLDYDQ 159
BLAST of FC868797 vs. ExPASy Swiss-Prot
Match: GLYA_ACIF5 (Serine hydroxymethyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=glyA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32 Identity = 74/155 (47.74%), Postives = 95/155 (61.29%), Query Frame = 1 Query: 229 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 693 DP + D + E RQ +ELI SEN+ S VM A GSV+TNKY+EGYPG RYYGG EY+D+AE L RALE F + NVQ+ SGS +N VY ++L+P D+IM + L HGGHL+HG K++ F+ Y + G IDYD Sbjct: 12 DPVLWDAMRKEARRQEDHVELIASENYASPMVMAAQGSVLTNKYAEGYPGKRYYGGCEYVDIAEQLAMDRALELFGAE----HANVQAHSGSQANQAVYLSVLQPGDKIMGMSLAHGGHLTHG-----AKVNVSGKLFQVAAYGVRAEDGRIDYD 157 The following BLAST results are available for this feature:
BLAST of FC868797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868797 ID=FC868797; Name=FC868797; organism=Citrus clementina; type=EST; length=697bpback to top |